RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 COL25A1Q9BXS0 654 aaPredicted RBP11.95□□□□□ -0.5
SDC2-201ENST00000302190 NCOR2Q9Y618 2525 aa11.95□□□□□ -0.5
SDC2-201ENST00000302190 A8MXE2 369 aa11.95□□□□□ -0.5
SDC2-201ENST00000302190 ZG16O60844 167 aa11.95□□□□□ -0.5
SDC2-201ENST00000302190 CDC34P49427 236 aaPredicted RBP11.95□□□□□ -0.5
SDC2-201ENST00000302190 THBS3P49746 956 aa11.95□□□□□ -0.5
SDC2-201ENST00000302190 SCCPDHQ8NBX0 429 aa11.95□□□□□ -0.5
SDC2-201ENST00000302190 S1PR3Q99500 378 aa11.95□□□□□ -0.5
SDC2-201ENST00000302190 LRFN3Q9BTN0 628 aa11.95□□□□□ -0.5
SDC2-201ENST00000302190 ZDHHC11Q9H8X9 412 aa11.95□□□□□ -0.5
SDC2-201ENST00000302190 FOXJ2Q9P0K8 574 aa11.95□□□□□ -0.5
SDC2-201ENST00000302190 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.95□□□□□ -0.52e-7■■□□□ 11.4
SDC2-201ENST00000302190 ZNF716A6NP11 495 aa11.95□□□□□ -0.5
SDC2-201ENST00000302190 C11orf94C9JXX5 98 aa11.95□□□□□ -0.5
SDC2-201ENST00000302190 TOX4O94842 621 aa11.95□□□□□ -0.5
SDC2-201ENST00000302190 MPZP25189 248 aa11.95□□□□□ -0.5
SDC2-201ENST00000302190 SSTR5P35346 364 aa11.95□□□□□ -0.5
SDC2-201ENST00000302190 TSPAN7P41732 249 aa11.95□□□□□ -0.5
SDC2-201ENST00000302190 CD81P60033 236 aa11.95□□□□□ -0.5
SDC2-201ENST00000302190 ZNF718Q3SXZ3 478 aa11.95□□□□□ -0.5
SDC2-201ENST00000302190 DMRTA1Q5VZB9 504 aa11.95□□□□□ -0.5
SDC2-201ENST00000302190 ACSM6Q6P461 480 aa11.95□□□□□ -0.5
SDC2-201ENST00000302190 UHRF2Q96PU4 802 aa11.95□□□□□ -0.5
SDC2-201ENST00000302190 VAX2Q9UIW0 290 aa11.95□□□□□ -0.5
SDC2-201ENST00000302190 IFITM10A6NMD0 228 aa11.94□□□□□ -0.5
SDC2-201ENST00000302190 H0Y8G0 127 aa11.94□□□□□ -0.5
SDC2-201ENST00000302190 CDX4O14627 284 aaPredicted RBP11.94□□□□□ -0.5
SDC2-201ENST00000302190 RRP8O43159 456 aaKnown RBP11.94□□□□□ -0.5
SDC2-201ENST00000302190 ACOT6Q3I5F7 207 aaPredicted RBP11.94□□□□□ -0.5
SDC2-201ENST00000302190 C16orf82Q7Z2V1 217 aa11.94□□□□□ -0.5
SDC2-201ENST00000302190 APELAP0DMC3 54 aa11.94□□□□□ -0.5
SDC2-201ENST00000302190 CRYGSP22914 178 aa11.94□□□□□ -0.5
SDC2-201ENST00000302190 FBXW9Q5XUX1 488 aa11.94□□□□□ -0.5
SDC2-201ENST00000302190 OR10A7Q8NGE5 316 aa11.94□□□□□ -0.5
SDC2-201ENST00000302190 RCC1LQ96I51 464 aaKnown RBP11.94□□□□□ -0.5
SDC2-201ENST00000302190 RYDENQ9NUL5 291 aaKnown RBP11.94□□□□□ -0.5
SDC2-201ENST00000302190 FOXD3Q9UJU5 478 aaPredicted RBP11.94□□□□□ -0.5
SDC2-201ENST00000302190 A0A1B0GU03 582 aa11.94□□□□□ -0.5
SDC2-201ENST00000302190 F6UZH7 168 aa11.94□□□□□ -0.5
SDC2-201ENST00000302190 H0Y980 276 aa11.94□□□□□ -0.5
SDC2-201ENST00000302190 SRP19P09132 144 aaKnown RBP11.94□□□□□ -0.5
SDC2-201ENST00000302190 RNPS1Q15287 305 aaKnown RBP11.94□□□□□ -0.5
SDC2-201ENST00000302190 ACY3Q96HD9 319 aa11.94□□□□□ -0.5
SDC2-201ENST00000302190 GPR87Q9BY21 358 aa11.94□□□□□ -0.5
SDC2-201ENST00000302190 RELNP78509 3460 aa11.93□□□□□ -0.5
SDC2-201ENST00000302190 ARFGEF3Q5TH69 2177 aa11.93□□□□□ -0.5
SDC2-201ENST00000302190 MT-CO2P00403 227 aa11.93□□□□□ -0.5
SDC2-201ENST00000302190 SOD3P08294 240 aa11.93□□□□□ -0.5
SDC2-201ENST00000302190 RIPPLY2Q5TAB7 128 aa11.93□□□□□ -0.5
SDC2-201ENST00000302190 FAM53AQ6NSI3 398 aaPredicted RBP11.93□□□□□ -0.5
SDC2-201ENST00000302190 DRAM1Q8N682 238 aa11.93□□□□□ -0.5
SDC2-201ENST00000302190 OR5D13Q8NGL4 314 aa11.93□□□□□ -0.5
SDC2-201ENST00000302190 NOL4LQ96MY1 436 aaPredicted RBP11.93□□□□□ -0.5
SDC2-201ENST00000302190 S1PR2O95136 353 aa11.93□□□□□ -0.5
SDC2-201ENST00000302190 CXCL1P09341 107 aa11.93□□□□□ -0.5
SDC2-201ENST00000302190 GLIPR1P48060 266 aa11.93□□□□□ -0.5
SDC2-201ENST00000302190 ABHD5Q8WTS1 349 aa11.93□□□□□ -0.5
SDC2-201ENST00000302190 TRAPPC1Q9Y5R8 145 aa11.93□□□□□ -0.5
SDC2-201ENST00000302190 A0A0G2JRQ6 117 aa11.93□□□□□ -0.5
SDC2-201ENST00000302190 SPAARA0A1B0GVQ0 90 aa11.93□□□□□ -0.5
SDC2-201ENST00000302190 HBZP02008 142 aa11.93□□□□□ -0.5
SDC2-201ENST00000302190 SMIM21Q3B7S5 101 aa11.93□□□□□ -0.5
SDC2-201ENST00000302190 C18orf12Q96KH6 178 aa11.93□□□□□ -0.5
SDC2-201ENST00000302190 PARD6AQ9NPB6 346 aa11.93□□□□□ -0.5
SDC2-201ENST00000302190 CRIM1Q9NZV1 1036 aa11.93□□□□□ -0.5
SDC2-201ENST00000302190 TAF15Q92804 592 aaKnown RBP eCLIP11.92□□□□□ -0.54e-6■■□□□ 14.4
SDC2-201ENST00000302190 DNPH1O43598 174 aa11.92□□□□□ -0.5
SDC2-201ENST00000302190 NDUFB4O95168 129 aa11.92□□□□□ -0.5
SDC2-201ENST00000302190 HSPB1P04792 205 aaKnown RBP11.92□□□□□ -0.5
SDC2-201ENST00000302190 MEF2BQ02080 365 aaPredicted RBP11.92□□□□□ -0.5
SDC2-201ENST00000302190 SRSF4Q08170 494 aaKnown RBP11.92□□□□□ -0.5
SDC2-201ENST00000302190 C20orf204Q6ZNR8 217 aa11.92□□□□□ -0.5
SDC2-201ENST00000302190 MRGPRGQ86SM5 289 aa11.92□□□□□ -0.5
SDC2-201ENST00000302190 OR2T10Q8NGZ9 312 aa11.92□□□□□ -0.5
SDC2-201ENST00000302190 R3HDM4Q96D70 268 aa11.92□□□□□ -0.5
SDC2-201ENST00000302190 REPIN1Q9BWE0 567 aaKnown RBP11.92□□□□□ -0.5
SDC2-201ENST00000302190 A8MWP6 167 aa11.92□□□□□ -0.5
SDC2-201ENST00000302190 K7N7A8 449 aa11.92□□□□□ -0.5
SDC2-201ENST00000302190 IGHV3-48P01763 117 aa11.92□□□□□ -0.5
SDC2-201ENST00000302190 SP1P08047 785 aa11.92□□□□□ -0.5
SDC2-201ENST00000302190 ERVFC1-1P60608 527 aa11.92□□□□□ -0.5
SDC2-201ENST00000302190 GGNQ86UU5 652 aa11.92□□□□□ -0.5
SDC2-201ENST00000302190 CBLN4Q9NTU7 201 aa11.92□□□□□ -0.5
SDC2-201ENST00000302190 HIST1H2BKO60814 126 aa11.91□□□□□ -0.5
SDC2-201ENST00000302190 HIST1H2BJP06899 126 aa11.91□□□□□ -0.5
SDC2-201ENST00000302190 HIST1H2BOP23527 126 aa11.91□□□□□ -0.5
SDC2-201ENST00000302190 CTSSP25774 331 aa11.91□□□□□ -0.5
SDC2-201ENST00000302190 HIST1H2BBP33778 126 aa11.91□□□□□ -0.5
SDC2-201ENST00000302190 HIST1H2BDP58876 126 aa11.91□□□□□ -0.5
SDC2-201ENST00000302190 HIST1H2BCP62807 126 aa11.91□□□□□ -0.5
SDC2-201ENST00000302190 HIST2H2BEQ16778 126 aa11.91□□□□□ -0.5
SDC2-201ENST00000302190 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.91□□□□□ -0.5
SDC2-201ENST00000302190 HEPN1Q6WQI6 88 aa11.91□□□□□ -0.5
SDC2-201ENST00000302190 H1FOOQ8IZA3 346 aaPredicted RBP11.91□□□□□ -0.5
SDC2-201ENST00000302190 DEFB124Q8NES8 71 aa11.91□□□□□ -0.5
SDC2-201ENST00000302190 GATAD1Q8WUU5 269 aa11.91□□□□□ -0.5
SDC2-201ENST00000302190 HIST1H2BHQ93079 126 aa11.91□□□□□ -0.5
SDC2-201ENST00000302190 TMEM18Q96B42 140 aa11.91□□□□□ -0.5
SDC2-201ENST00000302190 NEIL1Q96FI4 390 aaPredicted RBP11.91□□□□□ -0.5
SDC2-201ENST00000302190 HIST1H2BNQ99877 126 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms