RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 AGMATQ9BSE5 352 aa12.09□□□□□ -0.47
SMG8-201ENST00000300917 CALYQ9NYX4 217 aa12.09□□□□□ -0.47
SMG8-201ENST00000300917 TNFSF4P23510 183 aa12.09□□□□□ -0.47
SMG8-201ENST00000300917 ELLP55199 621 aaPredicted RBP12.09□□□□□ -0.47
SMG8-201ENST00000300917 PRB3Q04118 309 aaPredicted RBP12.09□□□□□ -0.47
SMG8-201ENST00000300917 HAGHQ16775 308 aa12.09□□□□□ -0.47
SMG8-201ENST00000300917 MORN2Q502X0 79 aa12.09□□□□□ -0.47
SMG8-201ENST00000300917 UQCC3Q6UW78 93 aa12.09□□□□□ -0.47
SMG8-201ENST00000300917 C1orf229Q6ZS94 237 aaPredicted RBP12.09□□□□□ -0.47
SMG8-201ENST00000300917 H2BFWTQ7Z2G1 175 aa12.09□□□□□ -0.47
SMG8-201ENST00000300917 SFT2D1Q8WV19 159 aa12.09□□□□□ -0.47
SMG8-201ENST00000300917 ARV1Q9H2C2 271 aa12.09□□□□□ -0.47
SMG8-201ENST00000300917 TOR1AO14656 332 aa12.08□□□□□ -0.47
SMG8-201ENST00000300917 GUK1Q16774 197 aa12.08□□□□□ -0.47
SMG8-201ENST00000300917 HAPLN4Q86UW8 402 aa12.08□□□□□ -0.47
SMG8-201ENST00000300917 DYSFO75923 2080 aa12.08□□□□□ -0.48
SMG8-201ENST00000300917 UBE2L5PA0A1B0GUS4 154 aa12.08□□□□□ -0.48
SMG8-201ENST00000300917 DNASE2O00115 360 aaPredicted RBP12.08□□□□□ -0.48
SMG8-201ENST00000300917 HMGB3O15347 200 aaKnown RBP12.08□□□□□ -0.48
SMG8-201ENST00000300917 SULT1A1P50225 295 aa12.08□□□□□ -0.48
SMG8-201ENST00000300917 ZNF273Q14593 569 aa12.08□□□□□ -0.48
SMG8-201ENST00000300917 VSIRQ9H7M9 311 aa12.08□□□□□ -0.48
SMG8-201ENST00000300917 CEBPZOSA8MTT3 80 aa12.08□□□□□ -0.48
SMG8-201ENST00000300917 TRIM77I1YAP6 450 aa12.08□□□□□ -0.48
SMG8-201ENST00000300917 PLAUP00749 431 aa12.08□□□□□ -0.48
SMG8-201ENST00000300917 GZMHP20718 246 aa12.08□□□□□ -0.48
SMG8-201ENST00000300917 PTAFRP25105 342 aa12.08□□□□□ -0.48
SMG8-201ENST00000300917 SVBPQ8N300 66 aa12.08□□□□□ -0.48
SMG8-201ENST00000300917 LSM10Q969L4 123 aaKnown RBP12.08□□□□□ -0.48
SMG8-201ENST00000300917 RAB40CQ96S21 281 aa12.08□□□□□ -0.48
SMG8-201ENST00000300917 ATP5SQ99766 215 aa12.08□□□□□ -0.48
SMG8-201ENST00000300917 MMP24Q9Y5R2 645 aa12.08□□□□□ -0.48
SMG8-201ENST00000300917 LHBP01229 141 aa12.07□□□□□ -0.48
SMG8-201ENST00000300917 IFNA5P01569 189 aa12.07□□□□□ -0.48
SMG8-201ENST00000300917 FBP1P09467 338 aa12.07□□□□□ -0.48
SMG8-201ENST00000300917 TNFRSF9Q07011 255 aa12.07□□□□□ -0.48
SMG8-201ENST00000300917 AKR1C8PQ5T2L2 129 aa12.07□□□□□ -0.48
SMG8-201ENST00000300917 PRAMEF5Q5TYX0 476 aa12.07□□□□□ -0.48
SMG8-201ENST00000300917 LYG1Q8N1E2 194 aa12.07□□□□□ -0.48
SMG8-201ENST00000300917 AIFM2Q9BRQ8 373 aa12.07□□□□□ -0.48
SMG8-201ENST00000300917 IL19Q9UHD0 177 aa12.07□□□□□ -0.48
SMG8-201ENST00000300917 MSRB2Q9Y3D2 182 aa12.07□□□□□ -0.48
SMG8-201ENST00000300917 MARCH11A6NNE9 402 aa12.07□□□□□ -0.48
SMG8-201ENST00000300917 LYNX1G3V0Z9 82 aa12.07□□□□□ -0.48
SMG8-201ENST00000300917 IFNA17P01571 189 aa12.07□□□□□ -0.48
SMG8-201ENST00000300917 LYNX1P0DP58 116 aa12.07□□□□□ -0.48
SMG8-201ENST00000300917 FGF8P55075 233 aaPredicted RBP12.07□□□□□ -0.48
SMG8-201ENST00000300917 C1orf174Q8IYL3 243 aa12.07□□□□□ -0.48
SMG8-201ENST00000300917 OR10Z1Q8NGY1 313 aa12.07□□□□□ -0.48
SMG8-201ENST00000300917 CD300LFQ8TDQ1 290 aa12.07□□□□□ -0.48
SMG8-201ENST00000300917 H1FXQ92522 213 aaKnown RBP12.07□□□□□ -0.48
SMG8-201ENST00000300917 DAOP14920 347 aa12.06□□□□□ -0.48
SMG8-201ENST00000300917 SNCAP37840 140 aa12.06□□□□□ -0.48
SMG8-201ENST00000300917 LCN15Q6UWW0 184 aa12.06□□□□□ -0.48
SMG8-201ENST00000300917 ZNF600Q6ZNG1 722 aa12.06□□□□□ -0.48
SMG8-201ENST00000300917 R3HDM4Q96D70 268 aa12.06□□□□□ -0.48
SMG8-201ENST00000300917 SAP30LQ9HAJ7 183 aa12.06□□□□□ -0.48
SMG8-201ENST00000300917 DYNLRB1Q9NP97 96 aa12.06□□□□□ -0.48
SMG8-201ENST00000300917 TRAV3A0A0B4J244 114 aa12.06□□□□□ -0.48
SMG8-201ENST00000300917 OPN1MWP04001 364 aa12.06□□□□□ -0.48
SMG8-201ENST00000300917 OPN1MW2P0DN77 364 aa12.06□□□□□ -0.48
SMG8-201ENST00000300917 OPN1MW3P0DN78 364 aa12.06□□□□□ -0.48
SMG8-201ENST00000300917 SCGB1C1Q8TD33 95 aa12.06□□□□□ -0.48
SMG8-201ENST00000300917 GAFA1Q96PS6 74 aa12.06□□□□□ -0.48
SMG8-201ENST00000300917 QTRT1Q9BXR0 403 aaKnown RBP12.06□□□□□ -0.48
SMG8-201ENST00000300917 ADH4P08319 380 aa12.06□□□□□ -0.48
SMG8-201ENST00000300917 DEFA4P12838 97 aa12.06□□□□□ -0.48
SMG8-201ENST00000300917 LOXL3P58215 753 aa12.06□□□□□ -0.48
SMG8-201ENST00000300917 OR4C12Q96R67 309 aa12.06□□□□□ -0.48
SMG8-201ENST00000300917 HINT2Q9BX68 163 aa12.06□□□□□ -0.48
SMG8-201ENST00000300917 WSB1Q9Y6I7 421 aa12.06□□□□□ -0.48
SMG8-201ENST00000300917 H2AFB1P0C5Y9 115 aa12.05□□□□□ -0.48
SMG8-201ENST00000300917 OR9G9P0C7N8 305 aa12.05□□□□□ -0.48
SMG8-201ENST00000300917 CCL3L1P16619 93 aa12.05□□□□□ -0.48
SMG8-201ENST00000300917 DUTP33316 252 aaKnown RBP12.05□□□□□ -0.48
SMG8-201ENST00000300917 DVL1P1P54792 670 aaPredicted RBP12.05□□□□□ -0.48
SMG8-201ENST00000300917 RBPJQ06330 500 aa12.05□□□□□ -0.48
SMG8-201ENST00000300917 C17orf58Q2M2W7 97 aa12.05□□□□□ -0.48
SMG8-201ENST00000300917 EDARADDQ8WWZ3 215 aa12.05□□□□□ -0.48
SMG8-201ENST00000300917 TNCP24821 2201 aa12.05□□□□□ -0.48
SMG8-201ENST00000300917 TRGV10A0A0A0MS01 117 aa12.05□□□□□ -0.48
SMG8-201ENST00000300917 A0A1B0GWJ7 208 aa12.05□□□□□ -0.48
SMG8-201ENST00000300917 LRRC30A6NM36 301 aa12.05□□□□□ -0.48
SMG8-201ENST00000300917 C17orf100A8MU93 164 aa12.05□□□□□ -0.48
SMG8-201ENST00000300917 MYOD1P15172 320 aa12.05□□□□□ -0.48
SMG8-201ENST00000300917 DLX1P56177 255 aa12.05□□□□□ -0.48
SMG8-201ENST00000300917 TMPRSS3P57727 454 aa12.05□□□□□ -0.48
SMG8-201ENST00000300917 CT45A1Q5HYN5 189 aa12.05□□□□□ -0.48
SMG8-201ENST00000300917 CT45A3Q8NHU0 189 aa12.05□□□□□ -0.48
SMG8-201ENST00000300917 C14orf79Q96F83 325 aa12.05□□□□□ -0.48
SMG8-201ENST00000300917 M0R036 132 aa12.05□□□□□ -0.48
SMG8-201ENST00000300917 BAXQ07812 192 aa12.05□□□□□ -0.48
SMG8-201ENST00000300917 CDSNQ15517 529 aa12.05□□□□□ -0.48
SMG8-201ENST00000300917 MSMO1Q15800 293 aa12.05□□□□□ -0.48
SMG8-201ENST00000300917 FAM122CQ6P4D5 195 aa12.05□□□□□ -0.48
SMG8-201ENST00000300917 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.05□□□□□ -0.48
SMG8-201ENST00000300917 CCL21O00585 134 aa12.04□□□□□ -0.48
SMG8-201ENST00000300917 SNRNP70P08621 437 aaKnown RBP12.04□□□□□ -0.48
SMG8-201ENST00000300917 SLC38A11Q08AI6 406 aa12.04□□□□□ -0.48
SMG8-201ENST00000300917 STUMQ69YW2 141 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms