RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 SRSF7Q16629 238 aaKnown RBP eCLIP12.41□□□□□ -0.42
CCNF-201ENST00000293968 IL3RAP26951 378 aa12.4□□□□□ -0.42
CCNF-201ENST00000293968 SPCS3P61009 180 aa12.4□□□□□ -0.42
CCNF-201ENST00000293968 AESQ08117 197 aa12.4□□□□□ -0.42
CCNF-201ENST00000293968 ABHD17BQ5VST6 288 aa12.4□□□□□ -0.42
CCNF-201ENST00000293968 TGIF2LYQ8IUE0 185 aa12.4□□□□□ -0.42
CCNF-201ENST00000293968 GALMQ96C23 342 aa12.4□□□□□ -0.42
CCNF-201ENST00000293968 NPCDR1Q9BY65 106 aa12.4□□□□□ -0.42
CCNF-201ENST00000293968 MPC1Q9Y5U8 109 aa12.4□□□□□ -0.42
CCNF-201ENST00000293968 F6UZH7 168 aa12.4□□□□□ -0.42
CCNF-201ENST00000293968 MKRN2OSH3BPM6 223 aa12.4□□□□□ -0.42
CCNF-201ENST00000293968 J3QT63 122 aa12.4□□□□□ -0.42
CCNF-201ENST00000293968 TEX38Q6PEX7 206 aa12.4□□□□□ -0.42
CCNF-201ENST00000293968 TBX15Q96SF7 602 aa12.4□□□□□ -0.42
CCNF-201ENST00000293968 UBE2ZQ9H832 354 aaPredicted RBP12.4□□□□□ -0.42
CCNF-201ENST00000293968 KITLGP21583 273 aa12.4□□□□□ -0.42
CCNF-201ENST00000293968 PPP1R32Q7Z5V6 425 aa12.4□□□□□ -0.42
CCNF-201ENST00000293968 Q8NFD4 153 aa12.4□□□□□ -0.42
CCNF-201ENST00000293968 IL17BQ9UHF5 180 aa12.4□□□□□ -0.42
CCNF-201ENST00000293968 C17orf98A8MV24 154 aa12.4□□□□□ -0.43
CCNF-201ENST00000293968 IGLV2-14P01704 120 aa12.4□□□□□ -0.43
CCNF-201ENST00000293968 RPL30P62888 115 aaKnown RBP12.4□□□□□ -0.43
CCNF-201ENST00000293968 PDLIM3Q53GG5 364 aaPredicted RBP12.4□□□□□ -0.43
CCNF-201ENST00000293968 SCCPDHQ8NBX0 429 aa12.4□□□□□ -0.43
CCNF-201ENST00000293968 POM121L2Q96KW2 1035 aa12.4□□□□□ -0.43
CCNF-201ENST00000293968 PRDM6Q9NQX0 595 aa12.4□□□□□ -0.43
CCNF-201ENST00000293968 TP53TG5Q9Y2B4 290 aa12.4□□□□□ -0.43
CCNF-201ENST00000293968 USF3Q68DE3 2245 aa12.39□□□□□ -0.43
CCNF-201ENST00000293968 B4E171 279 aa12.39□□□□□ -0.43
CCNF-201ENST00000293968 M0R143 59 aa12.39□□□□□ -0.43
CCNF-201ENST00000293968 SPINK4O60575 86 aa12.39□□□□□ -0.43
CCNF-201ENST00000293968 TSPAN7P41732 249 aa12.39□□□□□ -0.43
CCNF-201ENST00000293968 DNLZQ5SXM8 178 aa12.39□□□□□ -0.43
CCNF-201ENST00000293968 ZNF826PQ6ZT77 177 aa12.39□□□□□ -0.43
CCNF-201ENST00000293968 IMMP2LQ96T52 175 aa12.39□□□□□ -0.43
CCNF-201ENST00000293968 CCKARP32238 428 aa12.39□□□□□ -0.43
CCNF-201ENST00000293968 EDDM3AQ14507 147 aa12.39□□□□□ -0.43
CCNF-201ENST00000293968 CISD2Q8N5K1 135 aaKnown RBP12.39□□□□□ -0.43
CCNF-201ENST00000293968 RNASEH2CQ8TDP1 164 aaKnown RBP12.39□□□□□ -0.43
CCNF-201ENST00000293968 OR2J1Q9GZK6 312 aa12.39□□□□□ -0.43
CCNF-201ENST00000293968 RYDENQ9NUL5 291 aaKnown RBP12.39□□□□□ -0.43
CCNF-201ENST00000293968 LRRC30A6NM36 301 aa12.39□□□□□ -0.43
CCNF-201ENST00000293968 ZNF90Q03938 601 aa12.39□□□□□ -0.43
CCNF-201ENST00000293968 ACTL10Q5JWF8 245 aa12.39□□□□□ -0.43
CCNF-201ENST00000293968 TMEM14EPQ6UXP3 125 aa12.39□□□□□ -0.43
CCNF-201ENST00000293968 MOB1BQ7L9L4 216 aa12.39□□□□□ -0.43
CCNF-201ENST00000293968 FAM103A1Q9BTL3 118 aaKnown RBP12.39□□□□□ -0.43
CCNF-201ENST00000293968 SAMD10Q9BYL1 202 aa12.39□□□□□ -0.43
CCNF-201ENST00000293968 NAGKQ9UJ70 344 aa12.39□□□□□ -0.43
CCNF-201ENST00000293968 PSG11Q9UQ72 335 aa12.39□□□□□ -0.43
CCNF-201ENST00000293968 SIT1Q9Y3P8 196 aa12.39□□□□□ -0.43
CCNF-201ENST00000293968 DOCK10Q96BY6 2186 aa12.39□□□□□ -0.43
CCNF-201ENST00000293968 GCH1P30793 250 aa12.38□□□□□ -0.43
CCNF-201ENST00000293968 LINC00596Q86U02 117 aa12.38□□□□□ -0.43
CCNF-201ENST00000293968 MDP1Q86V88 176 aa12.38□□□□□ -0.43
CCNF-201ENST00000293968 SRP14P37108 136 aaKnown RBP12.38□□□□□ -0.43
CCNF-201ENST00000293968 NUTF2P61970 127 aaKnown RBP12.38□□□□□ -0.43
CCNF-201ENST00000293968 LBHQ53QV2 105 aaPredicted RBP12.38□□□□□ -0.43
CCNF-201ENST00000293968 AGMATQ9BSE5 352 aa12.38□□□□□ -0.43
CCNF-201ENST00000293968 HINT2Q9BX68 163 aa12.38□□□□□ -0.43
CCNF-201ENST00000293968 SNHG12Q9BXW3 62 aa12.38□□□□□ -0.43
CCNF-201ENST00000293968 HEYLQ9NQ87 328 aaPredicted RBP12.38□□□□□ -0.43
CCNF-201ENST00000293968 WNT9BO14905 357 aa12.38□□□□□ -0.43
CCNF-201ENST00000293968 ALKBH6Q3KRA9 238 aa12.38□□□□□ -0.43
CCNF-201ENST00000293968 BAGE3Q86Y29 109 aa12.38□□□□□ -0.43
CCNF-201ENST00000293968 BAGE2Q86Y30 109 aa12.38□□□□□ -0.43
CCNF-201ENST00000293968 PARD6AQ9NPB6 346 aa12.38□□□□□ -0.43
CCNF-201ENST00000293968 POLDIP2Q9Y2S7 368 aa12.38□□□□□ -0.43
CCNF-201ENST00000293968 DCAF12Q5T6F0 453 aa12.37□□□□□ -0.43
CCNF-201ENST00000293968 CMTM2Q8TAZ6 248 aa12.37□□□□□ -0.43
CCNF-201ENST00000293968 PAM16Q9Y3D7 125 aa12.37□□□□□ -0.43
CCNF-201ENST00000293968 FREM2Q5SZK8 3169 aa12.37□□□□□ -0.43
CCNF-201ENST00000293968 ATP6V1FQ16864 119 aa12.37□□□□□ -0.43
CCNF-201ENST00000293968 SSMEM1Q8WWF3 244 aa12.37□□□□□ -0.43
CCNF-201ENST00000293968 MRPL37Q9BZE1 423 aaKnown RBP12.37□□□□□ -0.43
CCNF-201ENST00000293968 DEFB127Q9H1M4 99 aa12.37□□□□□ -0.43
CCNF-201ENST00000293968 HAND1O96004 215 aa12.37□□□□□ -0.43
CCNF-201ENST00000293968 GFRA1P56159 465 aa12.37□□□□□ -0.43
CCNF-201ENST00000293968 RAB4BP61018 213 aa12.37□□□□□ -0.43
CCNF-201ENST00000293968 RNPS1Q15287 305 aaKnown RBP12.37□□□□□ -0.43
CCNF-201ENST00000293968 Q6P435 159 aa12.37□□□□□ -0.43
CCNF-201ENST00000293968 GBGT1Q8N5D6 347 aa12.37□□□□□ -0.43
CCNF-201ENST00000293968 FZR1Q9UM11 496 aa12.37□□□□□ -0.43
CCNF-201ENST00000293968 IL18BPO95998 194 aa12.37□□□□□ -0.43
CCNF-201ENST00000293968 CBLN1P23435 193 aa12.37□□□□□ -0.43
CCNF-201ENST00000293968 GNB1P62873 340 aa12.37□□□□□ -0.43
CCNF-201ENST00000293968 ZNF497Q6ZNH5 498 aa12.37□□□□□ -0.43
CCNF-201ENST00000293968 OR2M7Q8NG81 312 aa12.37□□□□□ -0.43
CCNF-201ENST00000293968 CT55Q8WUE5 264 aa12.37□□□□□ -0.43
CCNF-201ENST00000293968 TIMM9Q9Y5J7 89 aa12.37□□□□□ -0.43
CCNF-201ENST00000293968 A6NNC1 897 aa12.36□□□□□ -0.43
CCNF-201ENST00000293968 K7ESF4 209 aa12.36□□□□□ -0.43
CCNF-201ENST00000293968 CELA3BP08861 270 aa12.36□□□□□ -0.43
CCNF-201ENST00000293968 TRIM61Q5EBN2 209 aa12.36□□□□□ -0.43
CCNF-201ENST00000293968 PYGO2Q9BRQ0 406 aa12.36□□□□□ -0.43
CCNF-201ENST00000293968 IER2Q9BTL4 223 aa12.36□□□□□ -0.43
CCNF-201ENST00000293968 TMEM30CPA0ZSE6 113 aa12.36□□□□□ -0.43
CCNF-201ENST00000293968 NUPR1O60356 82 aa12.36□□□□□ -0.43
CCNF-201ENST00000293968 HBZP02008 142 aa12.36□□□□□ -0.43
CCNF-201ENST00000293968 ZNF645Q8N7E2 425 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms