RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 ODAMA1E959 279 aa13.42□□□□□ -0.26
SMAD6-201ENST00000288840 ENSAO43768 121 aaKnown RBP13.42□□□□□ -0.26
SMAD6-201ENST00000288840 TFF3Q07654 80 aa13.42□□□□□ -0.26
SMAD6-201ENST00000288840 RAB31Q13636 194 aa13.42□□□□□ -0.26
SMAD6-201ENST00000288840 BATFQ16520 125 aa13.42□□□□□ -0.26
SMAD6-201ENST00000288840 FAM78BQ5VT40 261 aa13.42□□□□□ -0.26
SMAD6-201ENST00000288840 RND1Q92730 232 aa13.42□□□□□ -0.26
SMAD6-201ENST00000288840 GUCD1Q96NT3 240 aa13.42□□□□□ -0.26
SMAD6-201ENST00000288840 SH2D2AQ9NP31 389 aa13.42□□□□□ -0.26
SMAD6-201ENST00000288840 YLPM1P49750 1951 aaKnown RBP13.42□□□□□ -0.26
SMAD6-201ENST00000288840 OOEPA6NGQ2 149 aa13.42□□□□□ -0.26
SMAD6-201ENST00000288840 ABHD12Q8N2K0 398 aa13.42□□□□□ -0.26
SMAD6-201ENST00000288840 METRNQ9UJH8 293 aa13.42□□□□□ -0.26
SMAD6-201ENST00000288840 MDFIC2A0A1B0GVS7 189 aa13.41□□□□□ -0.26
SMAD6-201ENST00000288840 C11orf94C9JXX5 98 aa13.41□□□□□ -0.26
SMAD6-201ENST00000288840 IGKV1-5P01602 117 aa13.41□□□□□ -0.26
SMAD6-201ENST00000288840 ERVFRD-1P60508 538 aa13.41□□□□□ -0.26
SMAD6-201ENST00000288840 ACOT6Q3I5F7 207 aaPredicted RBP13.41□□□□□ -0.26
SMAD6-201ENST00000288840 C16orf82Q7Z2V1 217 aa13.41□□□□□ -0.26
SMAD6-201ENST00000288840 OR13A1Q8NGR1 328 aa13.41□□□□□ -0.26
SMAD6-201ENST00000288840 CLDND2Q8NHS1 167 aa13.41□□□□□ -0.26
SMAD6-201ENST00000288840 RAB24Q969Q5 203 aa13.41□□□□□ -0.26
SMAD6-201ENST00000288840 GMPPAQ96IJ6 420 aaPredicted RBP13.41□□□□□ -0.26
SMAD6-201ENST00000288840 RHOVQ96L33 236 aa13.41□□□□□ -0.26
SMAD6-201ENST00000288840 LRFN3Q9BTN0 628 aa13.41□□□□□ -0.26
SMAD6-201ENST00000288840 TMEM147Q9BVK8 224 aa13.41□□□□□ -0.26
SMAD6-201ENST00000288840 DDA1Q9BW61 102 aa13.41□□□□□ -0.26
SMAD6-201ENST00000288840 CXXC4Q9H2H0 198 aa13.41□□□□□ -0.26
SMAD6-201ENST00000288840 HSPB1P04792 205 aaKnown RBP13.41□□□□□ -0.26
SMAD6-201ENST00000288840 SMIM6P0DI80 62 aa13.41□□□□□ -0.26
SMAD6-201ENST00000288840 MGST1P10620 155 aaKnown RBP13.41□□□□□ -0.26
SMAD6-201ENST00000288840 SPNS3Q6ZMD2 512 aa13.41□□□□□ -0.26
SMAD6-201ENST00000288840 FUT9Q9Y231 359 aa13.41□□□□□ -0.26
SMAD6-201ENST00000288840 TSTD3H0UI37 97 aa13.41□□□□□ -0.26
SMAD6-201ENST00000288840 OR7C2O60412 319 aa13.41□□□□□ -0.26
SMAD6-201ENST00000288840 TRGC1P0CF51 173 aa13.41□□□□□ -0.26
SMAD6-201ENST00000288840 APELAP0DMC3 54 aa13.41□□□□□ -0.26
SMAD6-201ENST00000288840 PRDX2P32119 198 aa13.41□□□□□ -0.26
SMAD6-201ENST00000288840 SSTP61278 116 aa13.41□□□□□ -0.26
SMAD6-201ENST00000288840 RPL39P5Q59GN2 51 aa13.41□□□□□ -0.26
SMAD6-201ENST00000288840 GCSAMLQ5JQS6 135 aa13.41□□□□□ -0.26
SMAD6-201ENST00000288840 PCSK4Q6UW60 755 aa13.41□□□□□ -0.26
SMAD6-201ENST00000288840 MRGPRGQ86SM5 289 aa13.41□□□□□ -0.26
SMAD6-201ENST00000288840 SAXO1Q8IYX7 474 aa13.41□□□□□ -0.26
SMAD6-201ENST00000288840 SPSB4Q96A44 273 aa13.41□□□□□ -0.26
SMAD6-201ENST00000288840 PCGF1Q9BSM1 259 aa13.41□□□□□ -0.26
SMAD6-201ENST00000288840 TRAV17A0A0B4J275 112 aa13.4□□□□□ -0.26
SMAD6-201ENST00000288840 RPL30P62888 115 aaKnown RBP13.4□□□□□ -0.26
SMAD6-201ENST00000288840 ZADH2Q8N4Q0 377 aa13.4□□□□□ -0.26
SMAD6-201ENST00000288840 XKRY2A2RUG3 117 aa13.4□□□□□ -0.26
SMAD6-201ENST00000288840 FOXF2Q12947 444 aa13.4□□□□□ -0.26
SMAD6-201ENST00000288840 ASCL4Q6XD76 172 aa13.4□□□□□ -0.26
SMAD6-201ENST00000288840 ZNF525Q8N782 197 aa13.4□□□□□ -0.26
SMAD6-201ENST00000288840 EDARADDQ8WWZ3 215 aa13.4□□□□□ -0.26
SMAD6-201ENST00000288840 GSN-AS1Q9NRJ2 163 aa13.4□□□□□ -0.26
SMAD6-201ENST00000288840 TMEM265A0A087WTH1 108 aa13.4□□□□□ -0.26
SMAD6-201ENST00000288840 WISP2O76076 250 aa13.4□□□□□ -0.26
SMAD6-201ENST00000288840 IGHV3-48P01763 117 aa13.4□□□□□ -0.26
SMAD6-201ENST00000288840 REG1BP48304 166 aa13.4□□□□□ -0.26
SMAD6-201ENST00000288840 THBS3P49746 956 aa13.4□□□□□ -0.26
SMAD6-201ENST00000288840 MEF2BQ02080 365 aaPredicted RBP13.4□□□□□ -0.26
SMAD6-201ENST00000288840 KCNIP4Q6PIL6 250 aa13.4□□□□□ -0.26
SMAD6-201ENST00000288840 PKIBQ9C010 78 aa13.4□□□□□ -0.26
SMAD6-201ENST00000288840 CEP295Q9C0D2 2601 aa13.4□□□□□ -0.26
SMAD6-201ENST00000288840 CEP192Q8TEP8 1941 aa13.39□□□□□ -0.27
SMAD6-201ENST00000288840 CUL9Q8IWT3 2517 aa13.39□□□□□ -0.27
SMAD6-201ENST00000288840 TNCP24821 2201 aa13.39□□□□□ -0.27
SMAD6-201ENST00000288840 CLDN14O95500 239 aa13.39□□□□□ -0.27
SMAD6-201ENST00000288840 COX5BP10606 129 aa13.39□□□□□ -0.27
SMAD6-201ENST00000288840 SPSB3Q6PJ21 355 aa13.39□□□□□ -0.27
SMAD6-201ENST00000288840 OR51G1Q8NGK1 321 aa13.39□□□□□ -0.27
SMAD6-201ENST00000288840 TAAR6Q96RI8 345 aa13.39□□□□□ -0.27
SMAD6-201ENST00000288840 COA4Q9NYJ1 87 aa13.39□□□□□ -0.27
SMAD6-201ENST00000288840 IGKV3D-15A0A087WSY6 115 aa13.39□□□□□ -0.27
SMAD6-201ENST00000288840 DUXBA0A1W2PPF3 345 aa13.39□□□□□ -0.27
SMAD6-201ENST00000288840 SELLP14151 372 aa13.39□□□□□ -0.27
SMAD6-201ENST00000288840 CIB3Q96Q77 187 aaPredicted RBP13.39□□□□□ -0.27
SMAD6-201ENST00000288840 WDR61Q9GZS3 305 aaKnown RBP13.39□□□□□ -0.27
SMAD6-201ENST00000288840 PGPEP1LA6NFU8 196 aa13.39□□□□□ -0.27
SMAD6-201ENST00000288840 MARCH11A6NNE9 402 aa13.39□□□□□ -0.27
SMAD6-201ENST00000288840 NDUFB4O95168 129 aa13.39□□□□□ -0.27
SMAD6-201ENST00000288840 PTBP3O95758 552 aaKnown RBP13.39□□□□□ -0.27
SMAD6-201ENST00000288840 CECR9P0C854 216 aa13.39□□□□□ -0.27
SMAD6-201ENST00000288840 CCL8P80075 99 aa13.39□□□□□ -0.27
SMAD6-201ENST00000288840 ACY3Q96HD9 319 aa13.39□□□□□ -0.27
SMAD6-201ENST00000288840 OTOGLQ3ZCN5 2332 aa13.38□□□□□ -0.27
SMAD6-201ENST00000288840 SSX2Q16385 188 aa13.38□□□□□ -0.27
SMAD6-201ENST00000288840 OR2V2Q96R30 315 aa13.38□□□□□ -0.27
SMAD6-201ENST00000288840 GGACTQ9BVM4 153 aa13.38□□□□□ -0.27
SMAD6-201ENST00000288840 LOC102723971A0A1B0GUV8 181 aa13.38□□□□□ -0.27
SMAD6-201ENST00000288840 HTD2P86397 168 aa13.38□□□□□ -0.27
SMAD6-201ENST00000288840 MIC13Q5XKP0 118 aa13.38□□□□□ -0.27
SMAD6-201ENST00000288840 SLC35E3Q7Z769 313 aa13.38□□□□□ -0.27
SMAD6-201ENST00000288840 QTRT1Q9BXR0 403 aaKnown RBP13.38□□□□□ -0.27
SMAD6-201ENST00000288840 NBEAQ8NFP9 2946 aa13.38□□□□□ -0.27
SMAD6-201ENST00000288840 CTAG1AP78358 180 aa13.38□□□□□ -0.27
SMAD6-201ENST00000288840 SLC35B1P78383 322 aa13.38□□□□□ -0.27
SMAD6-201ENST00000288840 ZCCHC24Q8N2G6 241 aaKnown RBP13.38□□□□□ -0.27
SMAD6-201ENST00000288840 ZNF645Q8N7E2 425 aa13.38□□□□□ -0.27
SMAD6-201ENST00000288840 OR8G5Q8NG78 346 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms