RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 RELBQ01201 579 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 FXYD3Q14802 87 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 FHL5Q5TD97 284 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 WDR25Q64LD2 544 aaPredicted RBP9.84□□□□□ -0.83
USP53-201ENST00000274030 ABHD12Q8N2K0 398 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 SMIM12Q96EX1 92 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 SMIM10Q96HG1 83 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 DIRC2Q96SL1 478 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 SHANK3Q9BYB0 1731 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 ISG15P05161 165 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 CD1AP06126 327 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 GCSHP23434 173 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 MC5RP33032 325 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 KIR2DL2P43627 348 aaPredicted RBP9.84□□□□□ -0.83
USP53-201ENST00000274030 SCNM1Q9BWG6 230 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 HSPB8Q9UJY1 196 aa9.84□□□□□ -0.83
USP53-201ENST00000274030 POLEQ07864 2286 aa9.84□□□□□ -0.84
USP53-201ENST00000274030 DIRC3C9JPN6 131 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 S1PR2O95136 353 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 CELA3AP09093 270 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 ZNF660Q6AZW8 331 aaPredicted RBP9.83□□□□□ -0.84
USP53-201ENST00000274030 GCSAMQ8N6F7 178 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 OR1N2Q8NGR9 330 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 LINC01560Q8TB33 94 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 TUBD1Q9UJT1 453 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 IGHV3OR16-13A0A075B7E8 117 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 IGHV3-74A0A0B4J1X5 117 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 PPIAL4CA0A0B4J2A2 164 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 CFDP00746 253 aaPredicted RBP9.83□□□□□ -0.84
USP53-201ENST00000274030 PPIAL4GP0DN37 164 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 FDCSPQ8NFU4 85 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 DNASE2BQ8WZ79 361 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 G6PC2Q9NQR9 355 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 HSPB7Q9UBY9 170 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 DOCK3Q8IZD9 2030 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 KLF7O75840 302 aaPredicted RBP9.83□□□□□ -0.84
USP53-201ENST00000274030 TRGC2P03986 189 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 NMBP08949 121 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 TMPRSS3P57727 454 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 EGR4Q05215 589 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 C1orf100Q5SVJ3 147 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 IBA57Q5T440 356 aaKnown RBP9.83□□□□□ -0.84
USP53-201ENST00000274030 AQP3Q92482 292 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 TAF15Q92804 592 aaKnown RBP eCLIP9.83□□□□□ -0.84
USP53-201ENST00000274030 CTHRC1Q96CG8 243 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 MEGF10Q96KG7 1140 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 RARRES2Q99969 163 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 SH3BGRL3Q9H299 93 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 PITPNC1Q9UKF7 332 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 DSPPQ9NZW4 1301 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 HKR1P10072 659 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 SFTPCP11686 197 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 PEAR1Q5VY43 1037 aaPredicted RBP9.83□□□□□ -0.84
USP53-201ENST00000274030 EBLN2Q6P2I7 272 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 PQLC2Q6ZP29 291 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 ZNRF1Q8ND25 227 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 IDI2-AS1Q9NZ38 188 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 MARCH11A6NNE9 402 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 H0YL77 283 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 WNT9BO14905 357 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 GDF9O60383 454 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 AREGP15514 252 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 ZNF25P17030 456 aaPredicted RBP9.83□□□□□ -0.84
USP53-201ENST00000274030 MAS1LP35410 378 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 Q5BKY6 102 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 BPIFA4PQ86YQ2 179 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 SELENOHQ8IZQ5 122 aaKnown RBP9.83□□□□□ -0.84
USP53-201ENST00000274030 C5orf66Q9H5L9 145 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 CACNA1DQ01668 2161 aa9.83□□□□□ -0.84
USP53-201ENST00000274030 TRBV5-7A0A0A0MS05 114 aa9.82□□□□□ -0.84
USP53-201ENST00000274030 hCG_38984A0A1B0GV85 526 aa9.82□□□□□ -0.84
USP53-201ENST00000274030 H7C2G1 150 aa9.82□□□□□ -0.84
USP53-201ENST00000274030 ABCA7Q8IZY2 2146 aa9.82□□□□□ -0.84
USP53-201ENST00000274030 SPTBN1Q01082 2364 aaKnown RBP9.82□□□□□ -0.84
USP53-201ENST00000274030 MEF2BQ02080 365 aaPredicted RBP9.82□□□□□ -0.84
USP53-201ENST00000274030 MMD2Q8IY49 270 aa9.82□□□□□ -0.84
USP53-201ENST00000274030 OR10J6PQ8NGY7 276 aa9.82□□□□□ -0.84
USP53-201ENST00000274030 METTL26Q96S19 204 aa9.82□□□□□ -0.84
USP53-201ENST00000274030 ZDHHC8Q9ULC8 765 aa9.82□□□□□ -0.84
USP53-201ENST00000274030 H2BFSP57053 126 aa9.82□□□□□ -0.84
USP53-201ENST00000274030 LINC01590Q5TEZ4 76 aa9.82□□□□□ -0.84
USP53-201ENST00000274030 ZNF818PQ6ZRF7 136 aa9.82□□□□□ -0.84
USP53-201ENST00000274030 SHISA5Q8N114 240 aa9.82□□□□□ -0.84
USP53-201ENST00000274030 PGLYRP4Q96LB8 373 aa9.82□□□□□ -0.84
USP53-201ENST00000274030 TIMP4Q99727 224 aa9.82□□□□□ -0.84
USP53-201ENST00000274030 PLXNB2O15031 1838 aa9.82□□□□□ -0.84
USP53-201ENST00000274030 A8MWL6 223 aa9.82□□□□□ -0.84
USP53-201ENST00000274030 GFRA3O60609 400 aa9.82□□□□□ -0.84
USP53-201ENST00000274030 ZNF658BQ4V348 819 aaPredicted RBP9.82□□□□□ -0.84
USP53-201ENST00000274030 CALHM1Q8IU99 346 aa9.82□□□□□ -0.84
USP53-201ENST00000274030 SIGLEC12Q96PQ1 595 aa9.82□□□□□ -0.84
USP53-201ENST00000274030 HSPB9Q9BQS6 159 aa9.82□□□□□ -0.84
USP53-201ENST00000274030 NUDT16L1Q9BRJ7 211 aaKnown RBP9.82□□□□□ -0.84
USP53-201ENST00000274030 TDRD15B5MCY1 1934 aaKnown RBP9.82□□□□□ -0.84
USP53-201ENST00000274030 ZNF324O75467 553 aaPredicted RBP9.81□□□□□ -0.84
USP53-201ENST00000274030 OTX1P32242 354 aaPredicted RBP9.81□□□□□ -0.84
USP53-201ENST00000274030 FHITP49789 147 aa9.81□□□□□ -0.84
USP53-201ENST00000274030 ATP5J2P56134 94 aa9.81□□□□□ -0.84
USP53-201ENST00000274030 LOXL4Q96JB6 756 aa9.81□□□□□ -0.84
USP53-201ENST00000274030 RNF115Q9Y4L5 304 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms