RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 IGHV3-7P01780 117 aa10.88□□□□□ -0.67
COL8A1-202ENST00000273342 IGHV3-43DP0DP04 118 aa10.88□□□□□ -0.67
COL8A1-202ENST00000273342 COX5AP20674 150 aa10.88□□□□□ -0.67
COL8A1-202ENST00000273342 OR3A1P47881 315 aa10.88□□□□□ -0.67
COL8A1-202ENST00000273342 RNPS1Q15287 305 aaKnown RBP10.88□□□□□ -0.67
COL8A1-202ENST00000273342 SPINK14Q6IE38 97 aa10.88□□□□□ -0.67
COL8A1-202ENST00000273342 SPSB4Q96A44 273 aa10.88□□□□□ -0.67
COL8A1-202ENST00000273342 AGMATQ9BSE5 352 aa10.88□□□□□ -0.67
COL8A1-202ENST00000273342 NPCDR1Q9BY65 106 aa10.88□□□□□ -0.67
COL8A1-202ENST00000273342 ODAMA1E959 279 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 KLF7O75840 302 aaPredicted RBP10.87□□□□□ -0.67
COL8A1-202ENST00000273342 SERPINA7P05543 415 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 CCKARP32238 428 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 PDLIM4P50479 330 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 RAB4BP61018 213 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 KRTAP27-1Q3LI81 207 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 C1orf194Q5T5A4 169 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 IFI44Q8TCB0 444 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 LSM10Q969L4 123 aaKnown RBP10.87□□□□□ -0.67
COL8A1-202ENST00000273342 ANAPC16Q96DE5 110 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 DIRC2Q96SL1 478 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 PRDM14Q9GZV8 571 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 LIN7CQ9NUP9 197 aaKnown RBP10.87□□□□□ -0.67
COL8A1-202ENST00000273342 GOLT1BQ9Y3E0 138 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 ANKRD30BLA7E2S9 258 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 SLC25A6P12236 298 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 CDC34P49427 236 aaPredicted RBP10.87□□□□□ -0.67
COL8A1-202ENST00000273342 NUFIP2Q7Z417 695 aaKnown RBP10.87□□□□□ -0.67
COL8A1-202ENST00000273342 OR52L2PQ8NGH6 319 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 RFESDQ8TAC1 157 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 CMTM2Q8TAZ6 248 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 HSPB9Q9BQS6 159 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 C12orf49Q9H741 205 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 A0A1B0GWJ7 208 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 FAM90A10PA6NDY2 464 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 FAM90A18PA6NE21 464 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 FAM90A16PA6NEW6 464 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 FAM90A20PA6NIJ5 464 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 FAM90A8PA6NJQ4 464 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 FAM90A7PA6NKC0 464 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 FAM90A22PA8MWA6 464 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 FAM90A12PA8MX19 464 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 FAM90A5PA8MXJ8 464 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 FAM90A23PA8MXZ1 464 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 OR2H2O95918 312 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 FAM90A15PP0C7V4 464 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 FAM90A13PP0C7W8 464 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 FAM90A14PP0C7W9 464 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 FAM90A24PP0C7X0 464 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 CXCL12P48061 93 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 SLC35B1P78383 322 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 DTD1Q8TEA8 209 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 TECTBQ96PL2 329 aa10.87□□□□□ -0.67
COL8A1-202ENST00000273342 C17orf98A8MV24 154 aa10.86□□□□□ -0.67
COL8A1-202ENST00000273342 CDIPTO14735 213 aa10.86□□□□□ -0.67
COL8A1-202ENST00000273342 GRPP07492 148 aa10.86□□□□□ -0.67
COL8A1-202ENST00000273342 OR10J1P30954 320 aa10.86□□□□□ -0.67
COL8A1-202ENST00000273342 TMEM14EPQ6UXP3 125 aa10.86□□□□□ -0.67
COL8A1-202ENST00000273342 Q6ZWC4 215 aa10.86□□□□□ -0.67
COL8A1-202ENST00000273342 UBE2ZQ9H832 354 aaPredicted RBP10.86□□□□□ -0.67
COL8A1-202ENST00000273342 RYDENQ9NUL5 291 aaKnown RBP10.86□□□□□ -0.67
COL8A1-202ENST00000273342 LAMA5O15230 3695 aa10.86□□□□□ -0.67
COL8A1-202ENST00000273342 TRBV20OR9-2A0A075B6H5 130 aa10.86□□□□□ -0.67
COL8A1-202ENST00000273342 RAB4AP20338 218 aa10.86□□□□□ -0.67
COL8A1-202ENST00000273342 SRD5A2P31213 254 aa10.86□□□□□ -0.67
COL8A1-202ENST00000273342 TNFSF10P50591 281 aa10.86□□□□□ -0.67
COL8A1-202ENST00000273342 RPL15P61313 204 aaKnown RBP10.86□□□□□ -0.67
COL8A1-202ENST00000273342 DMRTA1Q5VZB9 504 aa10.86□□□□□ -0.67
COL8A1-202ENST00000273342 AGBL5Q8NDL9 886 aa10.86□□□□□ -0.67
COL8A1-202ENST00000273342 Q8NFD4 153 aa10.86□□□□□ -0.67
COL8A1-202ENST00000273342 WDYHV1Q96HA8 205 aa10.86□□□□□ -0.67
COL8A1-202ENST00000273342 TMEM147Q9BVK8 224 aa10.86□□□□□ -0.67
COL8A1-202ENST00000273342 HES7Q9BYE0 225 aa10.86□□□□□ -0.67
COL8A1-202ENST00000273342 A0A1W2PPV4 95 aa10.85□□□□□ -0.67
COL8A1-202ENST00000273342 FAM166BA8MTA8 275 aa10.85□□□□□ -0.67
COL8A1-202ENST00000273342 SERF1AO75920 110 aa10.85□□□□□ -0.67
COL8A1-202ENST00000273342 OR5I1Q13606 314 aa10.85□□□□□ -0.67
COL8A1-202ENST00000273342 COLCA1Q6ZS62 124 aa10.85□□□□□ -0.67
COL8A1-202ENST00000273342 ZCCHC14Q8WYQ9 949 aaKnown RBP10.85□□□□□ -0.67
COL8A1-202ENST00000273342 APOBEC3DQ96AK3 386 aaPredicted RBP10.85□□□□□ -0.67
COL8A1-202ENST00000273342 RPLP1P05386 114 aaKnown RBP10.85□□□□□ -0.67
COL8A1-202ENST00000273342 KITLGP21583 273 aa10.85□□□□□ -0.67
COL8A1-202ENST00000273342 SRP14P37108 136 aaKnown RBP10.85□□□□□ -0.67
COL8A1-202ENST00000273342 ASPHD1Q5U4P2 390 aa10.85□□□□□ -0.67
COL8A1-202ENST00000273342 BAGE3Q86Y29 109 aa10.85□□□□□ -0.67
COL8A1-202ENST00000273342 BAGE2Q86Y30 109 aa10.85□□□□□ -0.67
COL8A1-202ENST00000273342 SAMD10Q9BYL1 202 aa10.85□□□□□ -0.67
COL8A1-202ENST00000273342 LY6G6EA0A0G2JKS1 128 aa10.84□□□□□ -0.67
COL8A1-202ENST00000273342 MDFIC2A0A1B0GVS7 189 aa10.84□□□□□ -0.67
COL8A1-202ENST00000273342 SCO2A0A1W2PP80 73 aa10.84□□□□□ -0.67
COL8A1-202ENST00000273342 NXPH2O95156 264 aa10.84□□□□□ -0.67
COL8A1-202ENST00000273342 KRTDAPP60985 99 aa10.84□□□□□ -0.67
COL8A1-202ENST00000273342 ZNF90Q03938 601 aa10.84□□□□□ -0.67
COL8A1-202ENST00000273342 KIAA1644Q3SXP7 199 aa10.84□□□□□ -0.67
COL8A1-202ENST00000273342 ARSJQ5FYB0 599 aaPredicted RBP10.84□□□□□ -0.67
COL8A1-202ENST00000273342 CENPVQ7Z7K6 275 aaPredicted RBP10.84□□□□□ -0.67
COL8A1-202ENST00000273342 TDHQ8IZJ6 230 aa10.84□□□□□ -0.67
COL8A1-202ENST00000273342 RIMS4Q9H426 269 aaPredicted RBP10.84□□□□□ -0.67
COL8A1-202ENST00000273342 MRPS17Q9Y2R5 130 aaKnown RBP10.84□□□□□ -0.67
COL8A1-202ENST00000273342 PXMP4Q9Y6I8 212 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms