RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 A0A1B0GU03 582 aa11.53□□□□□ -0.56
SS18-201ENST00000269137 KIAA1324LA8MWY0 1029 aaPredicted RBP11.53□□□□□ -0.56
SS18-201ENST00000269137 ARPC5O15511 151 aa11.53□□□□□ -0.56
SS18-201ENST00000269137 ATG12O94817 140 aa11.53□□□□□ -0.56
SS18-201ENST00000269137 IGKV1-5P01602 117 aa11.53□□□□□ -0.56
SS18-201ENST00000269137 CXCL2P19875 107 aa11.53□□□□□ -0.56
SS18-201ENST00000269137 C4BPBP20851 252 aa11.53□□□□□ -0.56
SS18-201ENST00000269137 THBS3P49746 956 aa11.53□□□□□ -0.56
SS18-201ENST00000269137 LINC00205P59089 165 aa11.53□□□□□ -0.56
SS18-201ENST00000269137 LMO4P61968 165 aa11.53□□□□□ -0.56
SS18-201ENST00000269137 THOC7Q6I9Y2 204 aaKnown RBP11.53□□□□□ -0.56
SS18-201ENST00000269137 FAM71F2Q6NXP2 309 aa11.53□□□□□ -0.56
SS18-201ENST00000269137 ZNF833PQ6ZTB9 187 aa11.53□□□□□ -0.56
SS18-201ENST00000269137 DDB2Q92466 427 aa11.53□□□□□ -0.56
SS18-201ENST00000269137 TNFSF18Q9UNG2 199 aa11.53□□□□□ -0.56
SS18-201ENST00000269137 PRELID3BQ9Y3B1 194 aa11.53□□□□□ -0.56
SS18-201ENST00000269137 DOPEY2Q9Y3R5 2298 aa11.53□□□□□ -0.56
SS18-201ENST00000269137 ARHGAP32A7KAX9 2087 aa11.52□□□□□ -0.56
SS18-201ENST00000269137 A8MXK9 166 aa11.52□□□□□ -0.57
SS18-201ENST00000269137 M0R1W7 72 aa11.52□□□□□ -0.57
SS18-201ENST00000269137 MBPP02686 304 aaPredicted RBP11.52□□□□□ -0.57
SS18-201ENST00000269137 ZNF137PP52743 207 aa11.52□□□□□ -0.57
SS18-201ENST00000269137 C1orf122Q6ZSJ8 110 aa11.52□□□□□ -0.57
SS18-201ENST00000269137 FAM219AQ8IW50 185 aa11.52□□□□□ -0.57
SS18-201ENST00000269137 ABHD12Q8N2K0 398 aa11.52□□□□□ -0.57
SS18-201ENST00000269137 FAM168AQ92567 244 aa11.52□□□□□ -0.57
SS18-201ENST00000269137 GPR146Q96CH1 333 aa11.52□□□□□ -0.57
SS18-201ENST00000269137 RRNAD1Q96FB5 475 aaKnown RBP11.52□□□□□ -0.57
SS18-201ENST00000269137 GSX2Q9BZM3 304 aa11.52□□□□□ -0.57
SS18-201ENST00000269137 PITX3O75364 302 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 IFNA7P01567 189 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 P0C879 139 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 AKR1C2P52895 323 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 OPCMLQ14982 345 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 OR2B11Q5JQS5 317 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 CLDND2Q8NHS1 167 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 C10orf105Q8TEF2 133 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 PIMREGQ9BSJ6 248 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 MFFQ9GZY8 342 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 PLEKHA2Q9HB19 425 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 ZNRD1Q9P1U0 126 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 MMP24Q9Y5R2 645 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 A0A0G2JRQ6 117 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 VWC2LB2RUY7 222 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 L7N2F9 121 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 ST8SIA3O43173 380 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 DEDDO75618 318 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 OR2F2O95006 317 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 S1PR2O95136 353 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 HPRT1P00492 218 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 RLN2P04090 185 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 ZFP36P26651 326 aaKnown RBP11.51□□□□□ -0.57
SS18-201ENST00000269137 COL8A1P27658 744 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 S100A10P60903 97 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 ZNF816Q0VGE8 651 aaPredicted RBP11.51□□□□□ -0.57
SS18-201ENST00000269137 OR2F1Q13607 317 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 ZNF345Q14585 488 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 ZNF787Q6DD87 383 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 CLEC2AQ6UVW9 174 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 ACOT7LQ6ZUV0 252 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 KIR3DL3Q8N743 410 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 Q8N7P7 452 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 ZNF383Q8NA42 475 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 OR10X1Q8NGY0 326 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 OR1S1Q8NH92 325 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 RNASE11Q8TAA1 199 aaKnown RBP11.51□□□□□ -0.57
SS18-201ENST00000269137 ST6GALNAC6Q969X2 333 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 TMEM186Q96B77 213 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 OR5AC2Q9NZP5 309 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 ONECUT1Q9UBC0 465 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 CELSR2Q9HCU4 2923 aa11.51□□□□□ -0.57
SS18-201ENST00000269137 WNK2Q9Y3S1 2297 aa11.5□□□□□ -0.57
SS18-201ENST00000269137 ASH1LQ9NR48 2969 aaKnown RBP11.5□□□□□ -0.57
SS18-201ENST00000269137 IGHV2-26A0A0B4J1V2 119 aa11.5□□□□□ -0.57
SS18-201ENST00000269137 A0A0D9SG52 128 aa11.5□□□□□ -0.57
SS18-201ENST00000269137 K7EPK0 472 aa11.5□□□□□ -0.57
SS18-201ENST00000269137 TOR1AO14656 332 aa11.5□□□□□ -0.57
SS18-201ENST00000269137 ENSAO43768 121 aaKnown RBP11.5□□□□□ -0.57
SS18-201ENST00000269137 FCGR3BO75015 233 aa11.5□□□□□ -0.57
SS18-201ENST00000269137 IGLV1-47P01700 117 aa11.5□□□□□ -0.57
SS18-201ENST00000269137 CT45A6P0DMU7 189 aa11.5□□□□□ -0.57
SS18-201ENST00000269137 CT45A5P0DMU8 189 aa11.5□□□□□ -0.57
SS18-201ENST00000269137 CT45A7P0DMV0 189 aa11.5□□□□□ -0.57
SS18-201ENST00000269137 PRRX1P54821 245 aa11.5□□□□□ -0.57
SS18-201ENST00000269137 ID3Q02535 119 aa11.5□□□□□ -0.57
SS18-201ENST00000269137 PAX2Q02962 417 aa11.5□□□□□ -0.57
SS18-201ENST00000269137 EXOSC2Q13868 293 aaKnown RBP11.5□□□□□ -0.57
SS18-201ENST00000269137 SMCO1Q147U7 214 aa11.5□□□□□ -0.57
SS18-201ENST00000269137 Q6ZRM9 215 aa11.5□□□□□ -0.57
SS18-201ENST00000269137 FAM71E2Q8N5Q1 922 aa11.5□□□□□ -0.57
SS18-201ENST00000269137 INO80EQ8NBZ0 244 aaPredicted RBP11.5□□□□□ -0.57
SS18-201ENST00000269137 BEND2Q8NDZ0 799 aa11.5□□□□□ -0.57
SS18-201ENST00000269137 NRGNQ92686 78 aa11.5□□□□□ -0.57
SS18-201ENST00000269137 CLEC7AQ9BXN2 247 aa11.5□□□□□ -0.57
SS18-201ENST00000269137 COA4Q9NYJ1 87 aa11.5□□□□□ -0.57
SS18-201ENST00000269137 POMT1Q9Y6A1 747 aa11.5□□□□□ -0.57
SS18-201ENST00000269137 FBN2P35556 2912 aa11.5□□□□□ -0.57
SS18-201ENST00000269137 PRTN3P24158 256 aa11.49□□□□□ -0.57
SS18-201ENST00000269137 IL3RAP26951 378 aa11.49□□□□□ -0.57
SS18-201ENST00000269137 S100A11P31949 105 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms