RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 PXMP4Q9Y6I8 212 aa11.95□□□□□ -0.5
CDH3-201ENST00000264012 KLF7O75840 302 aaPredicted RBP11.95□□□□□ -0.5
CDH3-201ENST00000264012 KLK2P20151 261 aa11.95□□□□□ -0.5
CDH3-201ENST00000264012 OR10J1P30954 320 aa11.95□□□□□ -0.5
CDH3-201ENST00000264012 GLRXP35754 106 aa11.95□□□□□ -0.5
CDH3-201ENST00000264012 C17orf82Q86X59 251 aaPredicted RBP11.95□□□□□ -0.5
CDH3-201ENST00000264012 LILRB1Q8NHL6 650 aaPredicted RBP11.95□□□□□ -0.5
CDH3-201ENST00000264012 IGLV3-32A0A0A0MS00 114 aa11.94□□□□□ -0.5
CDH3-201ENST00000264012 TMEM187Q14656 261 aa11.94□□□□□ -0.5
CDH3-201ENST00000264012 NR2C2APQ86WQ0 139 aa11.94□□□□□ -0.5
CDH3-201ENST00000264012 OR5R1Q8NH85 324 aa11.94□□□□□ -0.5
CDH3-201ENST00000264012 PRSS3P2Q8NHM4 247 aa11.94□□□□□ -0.5
CDH3-201ENST00000264012 LEAP2Q969E1 77 aa11.94□□□□□ -0.5
CDH3-201ENST00000264012 MS4A10Q96PG2 267 aa11.94□□□□□ -0.5
CDH3-201ENST00000264012 MARCH11A6NNE9 402 aa11.94□□□□□ -0.5
CDH3-201ENST00000264012 SMPD2O60906 423 aa11.94□□□□□ -0.5
CDH3-201ENST00000264012 MPDU1O75352 247 aa11.94□□□□□ -0.5
CDH3-201ENST00000264012 PGA5P0DJD9 388 aa11.94□□□□□ -0.5
CDH3-201ENST00000264012 CALHM1Q8IU99 346 aa11.94□□□□□ -0.5
CDH3-201ENST00000264012 LINC00518Q8N0U6 118 aa11.94□□□□□ -0.5
CDH3-201ENST00000264012 TM2D1Q9BX74 207 aa11.94□□□□□ -0.5
CDH3-201ENST00000264012 C1QTNF5Q9BXJ0 243 aa11.94□□□□□ -0.5
CDH3-201ENST00000264012 AURKAIP1Q9NWT8 199 aaPredicted RBP11.94□□□□□ -0.5
CDH3-201ENST00000264012 FAM90A26D6RGX4 464 aa11.94□□□□□ -0.5
CDH3-201ENST00000264012 WNT9BO14905 357 aa11.94□□□□□ -0.5
CDH3-201ENST00000264012 MELTFP08582 738 aa11.94□□□□□ -0.5
CDH3-201ENST00000264012 COL8A1P27658 744 aa11.94□□□□□ -0.5
CDH3-201ENST00000264012 PMS2P11Q13670 270 aa11.94□□□□□ -0.5
CDH3-201ENST00000264012 IZUMO4Q1ZYL8 232 aa11.94□□□□□ -0.5
CDH3-201ENST00000264012 PUSL1Q8N0Z8 303 aaKnown RBP11.94□□□□□ -0.5
CDH3-201ENST00000264012 IL22RA2Q969J5 263 aa11.94□□□□□ -0.5
CDH3-201ENST00000264012 TMEM140Q9NV12 185 aa11.94□□□□□ -0.5
CDH3-201ENST00000264012 SBF1O95248 1867 aa11.94□□□□□ -0.5
CDH3-201ENST00000264012 MPTX1A8MV57 137 aa11.94□□□□□ -0.5
CDH3-201ENST00000264012 NTN3O00634 580 aaPredicted RBP11.94□□□□□ -0.5
CDH3-201ENST00000264012 F12P00748 615 aaPredicted RBP11.94□□□□□ -0.5
CDH3-201ENST00000264012 SSTR5P35346 364 aa11.94□□□□□ -0.5
CDH3-201ENST00000264012 FAM27E3Q08E93 113 aa11.94□□□□□ -0.5
CDH3-201ENST00000264012 CYB561D1Q8N8Q1 229 aa11.94□□□□□ -0.5
CDH3-201ENST00000264012 VAMP8Q9BV40 100 aa11.94□□□□□ -0.5
CDH3-201ENST00000264012 SRD5A3Q9H8P0 318 aa11.94□□□□□ -0.5
CDH3-201ENST00000264012 KIF26BQ2KJY2 2108 aa11.94□□□□□ -0.5
CDH3-201ENST00000264012 CEACAM18A8MTB9 384 aa11.93□□□□□ -0.5
CDH3-201ENST00000264012 P01737 135 aa11.93□□□□□ -0.5
CDH3-201ENST00000264012 REPIN1Q9BWE0 567 aaKnown RBP11.93□□□□□ -0.5
CDH3-201ENST00000264012 THSD7BQ9C0I4 1608 aa11.93□□□□□ -0.5
CDH3-201ENST00000264012 VWA8A3KMH1 1905 aa11.93□□□□□ -0.5
CDH3-201ENST00000264012 S1PR2O95136 353 aa11.93□□□□□ -0.5
CDH3-201ENST00000264012 CLEC2AQ6UVW9 174 aa11.93□□□□□ -0.5
CDH3-201ENST00000264012 MMD2Q8IY49 270 aa11.93□□□□□ -0.5
CDH3-201ENST00000264012 DRAM1Q8N682 238 aa11.93□□□□□ -0.5
CDH3-201ENST00000264012 TAF15Q92804 592 aaKnown RBP eCLIP11.93□□□□□ -0.5
CDH3-201ENST00000264012 OR4C12Q96R67 309 aa11.93□□□□□ -0.5
CDH3-201ENST00000264012 NBASA2RRP1 2371 aa11.93□□□□□ -0.5
CDH3-201ENST00000264012 ROS1P08922 2347 aa11.93□□□□□ -0.5
CDH3-201ENST00000264012 TNFRSF9Q07011 255 aa11.93□□□□□ -0.5
CDH3-201ENST00000264012 NCMAPQ5T1S8 102 aa11.93□□□□□ -0.5
CDH3-201ENST00000264012 NHLRC2Q8NBF2 726 aa11.93□□□□□ -0.5
CDH3-201ENST00000264012 FAM216AQ8WUB2 273 aa11.93□□□□□ -0.5
CDH3-201ENST00000264012 INTS1Q8N201 2190 aaKnown RBP11.93□□□□□ -0.5
CDH3-201ENST00000264012 MDC1Q14676 2089 aaKnown RBP11.93□□□□□ -0.5
CDH3-201ENST00000264012 HYPMO75409 117 aa11.93□□□□□ -0.5
CDH3-201ENST00000264012 RHBDL1O75783 438 aa11.93□□□□□ -0.5
CDH3-201ENST00000264012 CRISP2P16562 243 aa11.93□□□□□ -0.5
CDH3-201ENST00000264012 LHX2P50458 406 aa11.93□□□□□ -0.5
CDH3-201ENST00000264012 CLDN18P56856 261 aa11.93□□□□□ -0.5
CDH3-201ENST00000264012 ABLIM2Q6H8Q1 611 aa11.93□□□□□ -0.5
CDH3-201ENST00000264012 ZNRF1Q8ND25 227 aa11.93□□□□□ -0.5
CDH3-201ENST00000264012 DEPPQ9NTK1 212 aa11.93□□□□□ -0.5
CDH3-201ENST00000264012 METTL1Q9UBP6 276 aaKnown RBP11.93□□□□□ -0.5
CDH3-201ENST00000264012 GOLT1BQ9Y3E0 138 aa11.93□□□□□ -0.5
CDH3-201ENST00000264012 ESPL1Q14674 2120 aa11.93□□□□□ -0.5
CDH3-201ENST00000264012 ZNF646O15015 1829 aaPredicted RBP11.92□□□□□ -0.5
CDH3-201ENST00000264012 IGKV3-7A0A075B6H7 116 aa11.92□□□□□ -0.5
CDH3-201ENST00000264012 IGSF23A1L1A6 192 aa11.92□□□□□ -0.5
CDH3-201ENST00000264012 PRR32B1ATL7 298 aa11.92□□□□□ -0.5
CDH3-201ENST00000264012 F5H697 171 aa11.92□□□□□ -0.5
CDH3-201ENST00000264012 ATXN7O15265 892 aaPredicted RBP11.92□□□□□ -0.5
CDH3-201ENST00000264012 MST1P26927 711 aa11.92□□□□□ -0.5
CDH3-201ENST00000264012 HCP5Q6MZN7 132 aa11.92□□□□□ -0.5
CDH3-201ENST00000264012 C11orf42Q8N5U0 333 aa11.92□□□□□ -0.5
CDH3-201ENST00000264012 TMEM204Q9BSN7 226 aa11.92□□□□□ -0.5
CDH3-201ENST00000264012 ELOVL5Q9NYP7 299 aa11.92□□□□□ -0.5
CDH3-201ENST00000264012 SNRNP200O75643 2136 aaKnown RBP11.92□□□□□ -0.5
CDH3-201ENST00000264012 NEURL1O76050 574 aa11.92□□□□□ -0.5
CDH3-201ENST00000264012 IGFBP3P17936 291 aaPredicted RBP11.92□□□□□ -0.5
CDH3-201ENST00000264012 HSPE1P61604 102 aaKnown RBP11.92□□□□□ -0.5
CDH3-201ENST00000264012 GUCA2BQ16661 112 aa11.92□□□□□ -0.5
CDH3-201ENST00000264012 SLC35E4Q6ICL7 350 aa11.92□□□□□ -0.5
CDH3-201ENST00000264012 POC1AQ8NBT0 407 aa11.92□□□□□ -0.5
CDH3-201ENST00000264012 PAXXQ9BUH6 204 aa11.92□□□□□ -0.5
CDH3-201ENST00000264012 HEATR5BQ9P2D3 2071 aa11.92□□□□□ -0.5
CDH3-201ENST00000264012 FAM74A7A6NL05 159 aa11.92□□□□□ -0.5
CDH3-201ENST00000264012 ZNF729A6NN14 1252 aaPredicted RBP11.92□□□□□ -0.5
CDH3-201ENST00000264012 SLC25A17O43808 307 aa11.92□□□□□ -0.5
CDH3-201ENST00000264012 COX19Q49B96 90 aa11.92□□□□□ -0.5
CDH3-201ENST00000264012 C1orf162Q8NEQ5 155 aaPredicted RBP11.92□□□□□ -0.5
CDH3-201ENST00000264012 STARD4Q96DR4 205 aa11.92□□□□□ -0.5
CDH3-201ENST00000264012 WDYHV1Q96HA8 205 aa11.92□□□□□ -0.5
CDH3-201ENST00000264012 TP53RKQ96S44 253 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms