RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 M0R1B8 84 aa13.85□□□□□ -0.19
CTCF-201ENST00000264010 RHBDL1O75783 438 aa13.85□□□□□ -0.19
CTCF-201ENST00000264010 TPPP2P59282 170 aa13.85□□□□□ -0.19
CTCF-201ENST00000264010 SRSF7Q16629 238 aaKnown RBP eCLIP13.85□□□□□ -0.19
CTCF-201ENST00000264010 FAM78BQ5VT40 261 aa13.85□□□□□ -0.19
CTCF-201ENST00000264010 ATOH7Q8N100 152 aa13.85□□□□□ -0.19
CTCF-201ENST00000264010 MSI2Q96DH6 328 aaKnown RBP13.85□□□□□ -0.19
CTCF-201ENST00000264010 DOCK7Q96N67 2140 aa13.85□□□□□ -0.19
CTCF-201ENST00000264010 GPHA2Q96T91 129 aa13.85□□□□□ -0.19
CTCF-201ENST00000264010 CACNG5Q9UF02 275 aa13.85□□□□□ -0.19
CTCF-201ENST00000264010 NPSP0C0P6 89 aa13.84□□□□□ -0.19
CTCF-201ENST00000264010 METTL15P1P0C7V9 234 aa13.84□□□□□ -0.19
CTCF-201ENST00000264010 IGHV1-2P23083 117 aa13.84□□□□□ -0.19
CTCF-201ENST00000264010 EDARADDQ8WWZ3 215 aa13.84□□□□□ -0.19
CTCF-201ENST00000264010 A0A1B0GU03 582 aa13.84□□□□□ -0.19
CTCF-201ENST00000264010 ATXN7O15265 892 aaPredicted RBP13.84□□□□□ -0.19
CTCF-201ENST00000264010 KITLGP21583 273 aa13.84□□□□□ -0.19
CTCF-201ENST00000264010 ERVK-16P61578 105 aa13.84□□□□□ -0.19
CTCF-201ENST00000264010 OR4A47Q6IF82 309 aa13.84□□□□□ -0.19
CTCF-201ENST00000264010 BHLHA15Q7RTS1 189 aaPredicted RBP13.84□□□□□ -0.19
CTCF-201ENST00000264010 A0A1W2PNU3 283 aaPredicted RBP13.84□□□□□ -0.19
CTCF-201ENST00000264010 A8MXE2 369 aa13.84□□□□□ -0.19
CTCF-201ENST00000264010 CRYABP02511 175 aaKnown RBP13.84□□□□□ -0.19
CTCF-201ENST00000264010 SPANXN5Q5MJ07 72 aa13.84□□□□□ -0.19
CTCF-201ENST00000264010 OR2Z1Q8NG97 314 aa13.84□□□□□ -0.19
CTCF-201ENST00000264010 CMTM2Q8TAZ6 248 aa13.84□□□□□ -0.19
CTCF-201ENST00000264010 MRPL30Q8TCC3 161 aaKnown RBP13.84□□□□□ -0.19
CTCF-201ENST00000264010 F6UZH7 168 aa13.84□□□□□ -0.19
CTCF-201ENST00000264010 NAPSAO96009 420 aa13.84□□□□□ -0.19
CTCF-201ENST00000264010 ZNF83P51522 516 aa13.84□□□□□ -0.19
CTCF-201ENST00000264010 CXorf66Q5JRM2 361 aaPredicted RBP13.84□□□□□ -0.19
CTCF-201ENST00000264010 KLF14Q8TD94 323 aaPredicted RBP13.84□□□□□ -0.19
CTCF-201ENST00000264010 CELA3BP08861 270 aa13.83□□□□□ -0.2
CTCF-201ENST00000264010 PSG2P11465 335 aa13.83□□□□□ -0.2
CTCF-201ENST00000264010 ADCYAP1P18509 176 aa13.83□□□□□ -0.2
CTCF-201ENST00000264010 DYNLT3P51808 116 aa13.83□□□□□ -0.2
CTCF-201ENST00000264010 TCTAP57738 103 aa13.83□□□□□ -0.2
CTCF-201ENST00000264010 TAS2R30P59541 319 aa13.83□□□□□ -0.2
CTCF-201ENST00000264010 RPS23P62266 143 aaKnown RBP13.83□□□□□ -0.2
CTCF-201ENST00000264010 TMEM252Q8N6L7 170 aa13.83□□□□□ -0.2
CTCF-201ENST00000264010 TMEM208Q9BTX3 173 aa13.83□□□□□ -0.2
CTCF-201ENST00000264010 DECR2Q9NUI1 292 aa13.83□□□□□ -0.2
CTCF-201ENST00000264010 TTC28Q96AY4 2481 aa13.83□□□□□ -0.2
CTCF-201ENST00000264010 OR5G3P0C626 314 aa13.83□□□□□ -0.2
CTCF-201ENST00000264010 ZNF738Q8NE65 137 aa13.83□□□□□ -0.2
CTCF-201ENST00000264010 CARHSP1Q9Y2V2 147 aaKnown RBP13.83□□□□□ -0.2
CTCF-201ENST00000264010 DLEU1O43261 78 aa13.83□□□□□ -0.2
CTCF-201ENST00000264010 UCP1P25874 307 aa13.83□□□□□ -0.2
CTCF-201ENST00000264010 RANP62826 216 aaKnown RBP13.83□□□□□ -0.2
CTCF-201ENST00000264010 P2RY6Q15077 328 aa13.83□□□□□ -0.2
CTCF-201ENST00000264010 Q6ZS49 121 aa13.83□□□□□ -0.2
CTCF-201ENST00000264010 OR8G5Q8NG78 346 aa13.83□□□□□ -0.2
CTCF-201ENST00000264010 ADAMTS20P59510 1910 aa13.82□□□□□ -0.2
CTCF-201ENST00000264010 OR10J1P30954 320 aa13.82□□□□□ -0.2
CTCF-201ENST00000264010 EDDM3BP56851 147 aa13.82□□□□□ -0.2
CTCF-201ENST00000264010 RNFT1Q5M7Z0 435 aa13.82□□□□□ -0.2
CTCF-201ENST00000264010 LRRC29Q8WV35 223 aa13.82□□□□□ -0.2
CTCF-201ENST00000264010 SMIM8Q96KF7 97 aa13.82□□□□□ -0.2
CTCF-201ENST00000264010 TMEM56Q96MV1 263 aa13.82□□□□□ -0.2
CTCF-201ENST00000264010 LIME1Q9H400 295 aa13.82□□□□□ -0.2
CTCF-201ENST00000264010 PLEKHA3Q9HB20 300 aa13.82□□□□□ -0.2
CTCF-201ENST00000264010 TMEM56-RWDD3S4R434 201 aa13.82□□□□□ -0.2
CTCF-201ENST00000264010 KLK10O43240 276 aa13.82□□□□□ -0.2
CTCF-201ENST00000264010 PITX3O75364 302 aa13.82□□□□□ -0.2
CTCF-201ENST00000264010 CD33P20138 364 aa13.82□□□□□ -0.2
CTCF-201ENST00000264010 USF1P22415 310 aaPredicted RBP13.82□□□□□ -0.2
CTCF-201ENST00000264010 CRIP3Q6Q6R5 217 aa13.82□□□□□ -0.2
CTCF-201ENST00000264010 H2BFWTQ7Z2G1 175 aa13.82□□□□□ -0.2
CTCF-201ENST00000264010 KLHDC1Q8N7A1 406 aa13.82□□□□□ -0.2
CTCF-201ENST00000264010 HSPB9Q9BQS6 159 aa13.82□□□□□ -0.2
CTCF-201ENST00000264010 NAGKQ9UJ70 344 aa13.82□□□□□ -0.2
CTCF-201ENST00000264010 SH3BGRL2Q9UJC5 107 aa13.82□□□□□ -0.2
CTCF-201ENST00000264010 TRAV24A0A0B4J272 114 aa13.82□□□□□ -0.2
CTCF-201ENST00000264010 OOEPA6NGQ2 149 aa13.82□□□□□ -0.2
CTCF-201ENST00000264010 RIPPLY3P57055 190 aa13.82□□□□□ -0.2
CTCF-201ENST00000264010 ZNF154Q13106 437 aa13.82□□□□□ -0.2
CTCF-201ENST00000264010 IGKV1D-13A0A0B4J2D9 117 aa13.81□□□□□ -0.2
CTCF-201ENST00000264010 ZNF503-AS2A6NEH8 195 aa13.81□□□□□ -0.2
CTCF-201ENST00000264010 IGKV1-13P0DP09 117 aa13.81□□□□□ -0.2
CTCF-201ENST00000264010 MRGPRDQ8TDS7 321 aa13.81□□□□□ -0.2
CTCF-201ENST00000264010 ENY2Q9NPA8 101 aa13.81□□□□□ -0.2
CTCF-201ENST00000264010 ASCL3Q9NQ33 180 aa13.81□□□□□ -0.2
CTCF-201ENST00000264010 SYNGR2O43760 224 aa13.81□□□□□ -0.2
CTCF-201ENST00000264010 RUNX1Q01196 453 aa13.81□□□□□ -0.2
CTCF-201ENST00000264010 PSG7Q13046 419 aa13.81□□□□□ -0.2
CTCF-201ENST00000264010 C1orf174Q8IYL3 243 aa13.81□□□□□ -0.2
CTCF-201ENST00000264010 OR1P1Q8NH06 330 aa13.81□□□□□ -0.2
CTCF-201ENST00000264010 OR1A1Q9P1Q5 309 aa13.81□□□□□ -0.2
CTCF-201ENST00000264010 WASHC3Q9Y3C0 194 aa13.81□□□□□ -0.2
CTCF-201ENST00000264010 CACNA1GO43497 2377 aa13.81□□□□□ -0.2
CTCF-201ENST00000264010 MARCH11A6NNE9 402 aa13.81□□□□□ -0.2
CTCF-201ENST00000264010 HIST1H2BKO60814 126 aa13.81□□□□□ -0.2
CTCF-201ENST00000264010 HIST1H2BJP06899 126 aa13.81□□□□□ -0.2
CTCF-201ENST00000264010 HIST1H2BOP23527 126 aa13.81□□□□□ -0.2
CTCF-201ENST00000264010 ATP6V0CP27449 155 aa13.81□□□□□ -0.2
CTCF-201ENST00000264010 HIST1H2BBP33778 126 aa13.81□□□□□ -0.2
CTCF-201ENST00000264010 HIST1H2BDP58876 126 aa13.81□□□□□ -0.2
CTCF-201ENST00000264010 HIST1H2BCP62807 126 aa13.81□□□□□ -0.2
CTCF-201ENST00000264010 TMEM267Q0VDI3 215 aaPredicted RBP13.81□□□□□ -0.2
CTCF-201ENST00000264010 HIST2H2BEQ16778 126 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms