RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 POLR3KQ9Y2Y1 108 aaPredicted RBP19.02■□□□□ 0.63
MCF2L-201ENST00000261963 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.01■□□□□ 0.63
MCF2L-201ENST00000261963 PSG2P11465 335 aa19.01■□□□□ 0.63
MCF2L-201ENST00000261963 OR3A1P47881 315 aa19.01■□□□□ 0.63
MCF2L-201ENST00000261963 ELLP55199 621 aaPredicted RBP19.01■□□□□ 0.63
MCF2L-201ENST00000261963 GBGT1Q8N5D6 347 aa19.01■□□□□ 0.63
MCF2L-201ENST00000261963 OR10V1Q8NGI7 309 aa19.01■□□□□ 0.63
MCF2L-201ENST00000261963 RNF150Q9ULK6 438 aa19.01■□□□□ 0.63
MCF2L-201ENST00000261963 IGHV3-64DA0A0J9YX35 117 aa19.01■□□□□ 0.63
MCF2L-201ENST00000261963 NKX2-8O15522 239 aa19.01■□□□□ 0.63
MCF2L-201ENST00000261963 NPSP0C0P6 89 aa19.01■□□□□ 0.63
MCF2L-201ENST00000261963 LINC00614P0C842 121 aa19.01■□□□□ 0.63
MCF2L-201ENST00000261963 MDH2P40926 338 aaKnown RBP19.01■□□□□ 0.63
MCF2L-201ENST00000261963 RPL29P47914 159 aaKnown RBP19.01■□□□□ 0.63
MCF2L-201ENST00000261963 UBE2NP61088 152 aaKnown RBP19.01■□□□□ 0.63
MCF2L-201ENST00000261963 SLC25A40Q8TBP6 338 aa19.01■□□□□ 0.63
MCF2L-201ENST00000261963 GPR146Q96CH1 333 aa19.01■□□□□ 0.63
MCF2L-201ENST00000261963 TTC28Q96AY4 2481 aa19.01■□□□□ 0.63
MCF2L-201ENST00000261963 SPENQ96T58 3664 aaKnown RBP19■□□□□ 0.63
MCF2L-201ENST00000261963 A0A1W2PPQ1 181 aa19■□□□□ 0.63
MCF2L-201ENST00000261963 CDIPTO14735 213 aa19■□□□□ 0.63
MCF2L-201ENST00000261963 HRASP01112 189 aa19■□□□□ 0.63
MCF2L-201ENST00000261963 CENPVQ7Z7K6 275 aaPredicted RBP19■□□□□ 0.63
MCF2L-201ENST00000261963 ZNF295-AS1Q8N0V1 137 aa19■□□□□ 0.63
MCF2L-201ENST00000261963 RBKSQ9H477 322 aa19■□□□□ 0.63
MCF2L-201ENST00000261963 KIAA1324LA8MWY0 1029 aaPredicted RBP19■□□□□ 0.63
MCF2L-201ENST00000261963 WNT2P09544 360 aa19■□□□□ 0.63
MCF2L-201ENST00000261963 GNB2P62879 340 aa19■□□□□ 0.63
MCF2L-201ENST00000261963 MRPL49Q13405 166 aaKnown RBP19■□□□□ 0.63
MCF2L-201ENST00000261963 CLEC12BQ2HXU8 276 aa19■□□□□ 0.63
MCF2L-201ENST00000261963 MOB1BQ7L9L4 216 aa19■□□□□ 0.63
MCF2L-201ENST00000261963 SSX7Q7RTT5 188 aa19■□□□□ 0.63
MCF2L-201ENST00000261963 Q8IYB0 196 aa19■□□□□ 0.63
MCF2L-201ENST00000261963 UBALD1Q8TB05 177 aa19■□□□□ 0.63
MCF2L-201ENST00000261963 POLDIP2Q9Y2S7 368 aa19■□□□□ 0.63
MCF2L-201ENST00000261963 IGKV1-39P01597 117 aa18.99■□□□□ 0.63
MCF2L-201ENST00000261963 IGHG3P01860 377 aa18.99■□□□□ 0.63
MCF2L-201ENST00000261963 IGKV1D-39P04432 117 aa18.99■□□□□ 0.63
MCF2L-201ENST00000261963 S100GP29377 79 aa18.99■□□□□ 0.63
MCF2L-201ENST00000261963 OR10J1P30954 320 aa18.99■□□□□ 0.63
MCF2L-201ENST00000261963 TGFBR3Q03167 851 aa18.99■□□□□ 0.63
MCF2L-201ENST00000261963 IZUMO4Q1ZYL8 232 aa18.99■□□□□ 0.63
MCF2L-201ENST00000261963 BTNL3Q6UXE8 466 aa18.99■□□□□ 0.63
MCF2L-201ENST00000261963 ZNF705AQ6ZN79 300 aaPredicted RBP18.99■□□□□ 0.63
MCF2L-201ENST00000261963 MRPL52Q86TS9 123 aaKnown RBP18.99■□□□□ 0.63
MCF2L-201ENST00000261963 PRR18Q8N4B5 295 aa18.99■□□□□ 0.63
MCF2L-201ENST00000261963 NAGKQ9UJ70 344 aa18.99■□□□□ 0.63
MCF2L-201ENST00000261963 ASPMQ8IZT6 3477 aa18.99■□□□□ 0.63
MCF2L-201ENST00000261963 SERPINE2P07093 398 aa18.99■□□□□ 0.63
MCF2L-201ENST00000261963 RAC2P15153 192 aa18.99■□□□□ 0.63
MCF2L-201ENST00000261963 SELEP16581 610 aa18.99■□□□□ 0.63
MCF2L-201ENST00000261963 RPL23P62829 140 aaKnown RBP18.99■□□□□ 0.63
MCF2L-201ENST00000261963 PSG7Q13046 419 aa18.99■□□□□ 0.63
MCF2L-201ENST00000261963 ZNF146Q15072 292 aa18.99■□□□□ 0.63
MCF2L-201ENST00000261963 GUSBP1Q15486 140 aa18.99■□□□□ 0.63
MCF2L-201ENST00000261963 GABRA6Q16445 453 aa18.99■□□□□ 0.63
MCF2L-201ENST00000261963 Q6ZRM9 215 aa18.99■□□□□ 0.63
MCF2L-201ENST00000261963 ELOVL1Q9BW60 279 aa18.99■□□□□ 0.63
MCF2L-201ENST00000261963 A6NNC1 897 aa18.98■□□□□ 0.63
MCF2L-201ENST00000261963 IQCF6A8MYZ5 107 aa18.98■□□□□ 0.63
MCF2L-201ENST00000261963 H3BP45 60 aa18.98■□□□□ 0.63
MCF2L-201ENST00000261963 ZNF737O75373 536 aa18.98■□□□□ 0.63
MCF2L-201ENST00000261963 KBTBD11O94819 623 aa18.98■□□□□ 0.63
MCF2L-201ENST00000261963 TMEM267Q0VDI3 215 aaPredicted RBP18.98■□□□□ 0.63
MCF2L-201ENST00000261963 ACSF3Q4G176 576 aaPredicted RBP18.98■□□□□ 0.63
MCF2L-201ENST00000261963 FAM214BQ7L5A3 538 aa18.98■□□□□ 0.63
MCF2L-201ENST00000261963 CNN1P51911 297 aaKnown RBP18.98■□□□□ 0.63
MCF2L-201ENST00000261963 CISD2Q8N5K1 135 aaKnown RBP18.98■□□□□ 0.63
MCF2L-201ENST00000261963 FDCSPQ8NFU4 85 aa18.98■□□□□ 0.63
MCF2L-201ENST00000261963 OR2T10Q8NGZ9 312 aa18.98■□□□□ 0.63
MCF2L-201ENST00000261963 TRIB1Q96RU8 372 aa18.98■□□□□ 0.63
MCF2L-201ENST00000261963 PSMG3Q9BT73 122 aaPredicted RBP18.98■□□□□ 0.63
MCF2L-201ENST00000261963 OR6C3Q9NZP0 311 aa18.98■□□□□ 0.63
MCF2L-201ENST00000261963 TRAPPC2LQ9UL33 140 aa18.98■□□□□ 0.63
MCF2L-201ENST00000261963 ZFHX4Q86UP3 3567 aa18.97■□□□□ 0.63
MCF2L-201ENST00000261963 NXPH2O95156 264 aa18.97■□□□□ 0.63
MCF2L-201ENST00000261963 MPV17P39210 176 aa18.97■□□□□ 0.63
MCF2L-201ENST00000261963 CCL11P51671 97 aa18.97■□□□□ 0.63
MCF2L-201ENST00000261963 MBNL3Q9NUK0 354 aaKnown RBP18.97■□□□□ 0.63
MCF2L-201ENST00000261963 MAP1LC3B2A6NCE7 125 aa18.96■□□□□ 0.63
MCF2L-201ENST00000261963 SLC25A6P12236 298 aa18.96■□□□□ 0.63
MCF2L-201ENST00000261963 FAM180AQ6UWF9 173 aa18.96■□□□□ 0.63
MCF2L-201ENST00000261963 Q6ZT83 130 aa18.96■□□□□ 0.63
MCF2L-201ENST00000261963 ARL6IP6Q8N6S5 226 aa18.96■□□□□ 0.63
MCF2L-201ENST00000261963 MAP1LC3BQ9GZQ8 125 aa18.96■□□□□ 0.63
MCF2L-201ENST00000261963 PIP4P1Q86T03 277 aa18.96■□□□□ 0.63
MCF2L-201ENST00000261963 RPUSD4Q96CM3 377 aaKnown RBP18.96■□□□□ 0.63
MCF2L-201ENST00000261963 WFIKKN1Q96NZ8 548 aa18.96■□□□□ 0.63
MCF2L-201ENST00000261963 OPN3Q9H1Y3 402 aaPredicted RBP18.96■□□□□ 0.63
MCF2L-201ENST00000261963 PPP1R3CQ9UQK1 317 aa18.96■□□□□ 0.63
MCF2L-201ENST00000261963 WIPI2Q9Y4P8 454 aa18.96■□□□□ 0.63
MCF2L-201ENST00000261963 GRPP07492 148 aa18.95■□□□□ 0.62
MCF2L-201ENST00000261963 CD82P27701 267 aa18.95■□□□□ 0.62
MCF2L-201ENST00000261963 MEF2BQ02080 365 aaPredicted RBP18.95■□□□□ 0.62
MCF2L-201ENST00000261963 INO80CQ6PI98 192 aaPredicted RBP18.95■□□□□ 0.62
MCF2L-201ENST00000261963 ANAPC16Q96DE5 110 aa18.95■□□□□ 0.62
MCF2L-201ENST00000261963 ZNF705FA8MVS1 300 aaPredicted RBP18.95■□□□□ 0.62
MCF2L-201ENST00000261963 IFNL4K9M1U5 179 aa18.95■□□□□ 0.62
MCF2L-201ENST00000261963 TYMSP04818 313 aa18.95■□□□□ 0.62
MCF2L-201ENST00000261963 ZNF705DP0CH99 300 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms