RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 ATP5G2Q06055 141 aa10.43□□□□□ -0.74
SPG11-201ENST00000261866 OR10G8Q8NGN5 311 aa10.43□□□□□ -0.74
SPG11-201ENST00000261866 LYNX1G3V0Z9 82 aa10.43□□□□□ -0.74
SPG11-201ENST00000261866 CLDN34H7C241 214 aa10.43□□□□□ -0.74
SPG11-201ENST00000261866 SIGLEC5O15389 551 aa10.43□□□□□ -0.74
SPG11-201ENST00000261866 LYNX1P0DP58 116 aa10.43□□□□□ -0.74
SPG11-201ENST00000261866 RPL39P5Q59GN2 51 aa10.43□□□□□ -0.74
SPG11-201ENST00000261866 NEU1Q99519 415 aa10.43□□□□□ -0.74
SPG11-201ENST00000261866 DLL3Q9NYJ7 618 aa10.43□□□□□ -0.74
SPG11-201ENST00000261866 CBY1Q9Y3M2 126 aa10.43□□□□□ -0.74
SPG11-201ENST00000261866 HOGA1Q86XE5 327 aa10.43□□□□□ -0.74
SPG11-201ENST00000261866 TMEM127O75204 238 aa10.42□□□□□ -0.74
SPG11-201ENST00000261866 FAM53AQ6NSI3 398 aaPredicted RBP10.42□□□□□ -0.74
SPG11-201ENST00000261866 MARVELD3Q96A59 401 aa10.42□□□□□ -0.74
SPG11-201ENST00000261866 MANBALQ9NQG1 85 aa10.42□□□□□ -0.74
SPG11-201ENST00000261866 RGS13O14921 159 aa10.42□□□□□ -0.74
SPG11-201ENST00000261866 TGFAP01135 160 aa10.42□□□□□ -0.74
SPG11-201ENST00000261866 C8orf82Q6P1X6 216 aaPredicted RBP10.42□□□□□ -0.74
SPG11-201ENST00000261866 SLC35E3Q7Z769 313 aa10.42□□□□□ -0.74
SPG11-201ENST00000261866 VWCEQ96DN2 955 aa10.42□□□□□ -0.74
SPG11-201ENST00000261866 MIOXQ9UGB7 285 aa10.42□□□□□ -0.74
SPG11-201ENST00000261866 NAT8Q9UHE5 227 aa10.42□□□□□ -0.74
SPG11-201ENST00000261866 PXMP4Q9Y6I8 212 aa10.42□□□□□ -0.74
SPG11-201ENST00000261866 A0A0B4J293 547 aa10.42□□□□□ -0.74
SPG11-201ENST00000261866 RND2P52198 227 aa10.42□□□□□ -0.74
SPG11-201ENST00000261866 NFAM1Q8NET5 270 aaPredicted RBP10.42□□□□□ -0.74
SPG11-201ENST00000261866 MRPL13Q9BYD1 178 aaKnown RBP10.42□□□□□ -0.74
SPG11-201ENST00000261866 F12P00748 615 aaPredicted RBP10.42□□□□□ -0.74
SPG11-201ENST00000261866 APCSP02743 223 aa10.42□□□□□ -0.74
SPG11-201ENST00000261866 BSXQ3C1V8 233 aa10.42□□□□□ -0.74
SPG11-201ENST00000261866 DDB2Q92466 427 aa10.42□□□□□ -0.74
SPG11-201ENST00000261866 ODAMA1E959 279 aa10.42□□□□□ -0.74
SPG11-201ENST00000261866 MMP9P14780 707 aa10.42□□□□□ -0.74
SPG11-201ENST00000261866 LINC00299Q6ZSB3 139 aa10.42□□□□□ -0.74
SPG11-201ENST00000261866 WDFY1Q8IWB7 410 aa10.42□□□□□ -0.74
SPG11-201ENST00000261866 FAM181AQ8N9Y4 354 aa10.42□□□□□ -0.74
SPG11-201ENST00000261866 GPR61Q9BZJ8 451 aa10.42□□□□□ -0.74
SPG11-201ENST00000261866 DOCK3Q8IZD9 2030 aa10.42□□□□□ -0.74
SPG11-201ENST00000261866 MUC21A0A0G2JKD1 596 aa10.42□□□□□ -0.74
SPG11-201ENST00000261866 MUC21A0A140T8X8 626 aa10.42□□□□□ -0.74
SPG11-201ENST00000261866 KLF7O75840 302 aaPredicted RBP10.42□□□□□ -0.74
SPG11-201ENST00000261866 WISP3O95389 354 aaPredicted RBP10.42□□□□□ -0.74
SPG11-201ENST00000261866 ZNF735P0CB33 412 aa10.42□□□□□ -0.74
SPG11-201ENST00000261866 MUC21Q5SSG8 566 aa10.42□□□□□ -0.74
SPG11-201ENST00000261866 ESPL1Q14674 2120 aa10.42□□□□□ -0.74
SPG11-201ENST00000261866 LINC00869P0C866 280 aa10.41□□□□□ -0.74
SPG11-201ENST00000261866 KLK2P20151 261 aa10.41□□□□□ -0.74
SPG11-201ENST00000261866 RPL8P62917 257 aaKnown RBP10.41□□□□□ -0.74
SPG11-201ENST00000261866 AWAT1Q58HT5 328 aa10.41□□□□□ -0.74
SPG11-201ENST00000261866 SYNGR3O43761 229 aa10.41□□□□□ -0.74
SPG11-201ENST00000261866 CXorf1O96002 111 aa10.41□□□□□ -0.74
SPG11-201ENST00000261866 CD24P25063 80 aa10.41□□□□□ -0.74
SPG11-201ENST00000261866 SCAND1P57086 179 aa10.41□□□□□ -0.74
SPG11-201ENST00000261866 DNLZQ5SXM8 178 aa10.41□□□□□ -0.74
SPG11-201ENST00000261866 ZNF703Q9H7S9 590 aaPredicted RBP10.41□□□□□ -0.74
SPG11-201ENST00000261866 OR5AC2Q9NZP5 309 aa10.41□□□□□ -0.74
SPG11-201ENST00000261866 IGKV1D-42A0A075B6H8 117 aa10.41□□□□□ -0.74
SPG11-201ENST00000261866 IGLV1-36A0A0B4J1U3 117 aa10.41□□□□□ -0.74
SPG11-201ENST00000261866 LIMS1P48059 325 aa10.41□□□□□ -0.74
SPG11-201ENST00000261866 MIC13Q5XKP0 118 aa10.41□□□□□ -0.74
SPG11-201ENST00000261866 SBF2Q86WG5 1849 aa10.41□□□□□ -0.74
SPG11-201ENST00000261866 A0A0U1RQV5 110 aa10.41□□□□□ -0.74
SPG11-201ENST00000261866 TMEM78Q5T7P6 136 aa10.41□□□□□ -0.74
SPG11-201ENST00000261866 C9JCJ5 164 aa10.41□□□□□ -0.74
SPG11-201ENST00000261866 HIST1H1BP16401 226 aaKnown RBP10.41□□□□□ -0.74
SPG11-201ENST00000261866 CXorf66Q5JRM2 361 aaPredicted RBP10.41□□□□□ -0.74
SPG11-201ENST00000261866 PGLYRP4Q96LB8 373 aa10.41□□□□□ -0.74
SPG11-201ENST00000261866 S1PR2O95136 353 aa10.41□□□□□ -0.74
SPG11-201ENST00000261866 UNC119Q13432 240 aa10.41□□□□□ -0.74
SPG11-201ENST00000261866 LRRC75BQ2VPJ9 315 aa10.41□□□□□ -0.74
SPG11-201ENST00000261866 SNURFLB1AK76 121 aa10.41□□□□□ -0.74
SPG11-201ENST00000261866 DEDDO75618 318 aa10.41□□□□□ -0.74
SPG11-201ENST00000261866 OR2A4O95047 310 aa10.41□□□□□ -0.74
SPG11-201ENST00000261866 MOSP00540 346 aa10.41□□□□□ -0.74
SPG11-201ENST00000261866 FXYD3Q14802 87 aa10.41□□□□□ -0.74
SPG11-201ENST00000261866 MEIG1Q5JSS6 88 aa10.41□□□□□ -0.74
SPG11-201ENST00000261866 C1orf174Q8IYL3 243 aa10.41□□□□□ -0.74
SPG11-201ENST00000261866 OR2A7Q96R45 310 aa10.41□□□□□ -0.74
SPG11-201ENST00000261866 MPDU1O75352 247 aa10.4□□□□□ -0.74
SPG11-201ENST00000261866 GCM2O75603 506 aaPredicted RBP10.4□□□□□ -0.74
SPG11-201ENST00000261866 RIGQ13278 110 aa10.4□□□□□ -0.74
SPG11-201ENST00000261866 UBE2V2Q15819 145 aa10.4□□□□□ -0.74
SPG11-201ENST00000261866 ZXDCQ2QGD7 858 aaPredicted RBP10.4□□□□□ -0.74
SPG11-201ENST00000261866 APOBEC3AP31941 199 aaPredicted RBP10.4□□□□□ -0.74
SPG11-201ENST00000261866 ABLIM2Q6H8Q1 611 aa10.4□□□□□ -0.74
SPG11-201ENST00000261866 PCSK4Q6UW60 755 aa10.4□□□□□ -0.74
SPG11-201ENST00000261866 FAM168AQ92567 244 aa10.4□□□□□ -0.74
SPG11-201ENST00000261866 FAM131CQ96AQ9 280 aa10.4□□□□□ -0.74
SPG11-201ENST00000261866 CHCHD2Q9Y6H1 151 aaPredicted RBP10.4□□□□□ -0.74
SPG11-201ENST00000261866 DUXBA0A1W2PPF3 345 aa10.4□□□□□ -0.74
SPG11-201ENST00000261866 TGFBR3LH3BV60 316 aa10.4□□□□□ -0.74
SPG11-201ENST00000261866 CORTO00230 105 aa10.4□□□□□ -0.74
SPG11-201ENST00000261866 PGLYRP1O75594 196 aaPredicted RBP10.4□□□□□ -0.74
SPG11-201ENST00000261866 ZP3P21754 424 aa10.4□□□□□ -0.74
SPG11-201ENST00000261866 ATP6V0CP27449 155 aa10.4□□□□□ -0.74
SPG11-201ENST00000261866 RNF212Q495C1 297 aa10.4□□□□□ -0.74
SPG11-201ENST00000261866 SSBP3Q9BWW4 388 aaPredicted RBP10.4□□□□□ -0.74
SPG11-201ENST00000261866 SEC11CQ9BY50 192 aa10.4□□□□□ -0.74
SPG11-201ENST00000261866 COL5A1-AS1Q5SY13 56 aa10.4□□□□□ -0.74
SPG11-201ENST00000261866 GCSAMQ8N6F7 178 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms