RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 LOC102723971A0A1B0GUV8 181 aa15.95■□□□□ 0.14
COL4A3BP-201ENST00000261415 TEX43Q6ZNM6 134 aa15.95■□□□□ 0.14
COL4A3BP-201ENST00000261415 SSX8Q7RTT4 187 aa15.95■□□□□ 0.14
COL4A3BP-201ENST00000261415 PCGF1Q9BSM1 259 aa15.95■□□□□ 0.14
COL4A3BP-201ENST00000261415 LAMP3Q9UQV4 416 aa15.95■□□□□ 0.14
COL4A3BP-201ENST00000261415 KNG1P01042 644 aa15.94■□□□□ 0.14
COL4A3BP-201ENST00000261415 TFPI2P48307 235 aa15.94■□□□□ 0.14
COL4A3BP-201ENST00000261415 ERVS71-1P61550 626 aa15.94■□□□□ 0.14
COL4A3BP-201ENST00000261415 RAB11AP62491 216 aa15.94■□□□□ 0.14
COL4A3BP-201ENST00000261415 ACTL10Q5JWF8 245 aa15.94■□□□□ 0.14
COL4A3BP-201ENST00000261415 WFDC8Q8IUA0 241 aa15.94■□□□□ 0.14
COL4A3BP-201ENST00000261415 OR56B2PQ8NGI1 322 aa15.94■□□□□ 0.14
COL4A3BP-201ENST00000261415 MOB3AQ96BX8 217 aa15.94■□□□□ 0.14
COL4A3BP-201ENST00000261415 OR5B12Q96R08 314 aa15.94■□□□□ 0.14
COL4A3BP-201ENST00000261415 VSIG8P0DPA2 414 aa15.94■□□□□ 0.14
COL4A3BP-201ENST00000261415 AMY2BP19961 511 aa15.94■□□□□ 0.14
COL4A3BP-201ENST00000261415 ATP6V0CP27449 155 aa15.94■□□□□ 0.14
COL4A3BP-201ENST00000261415 GRNP28799 593 aaKnown RBP15.94■□□□□ 0.14
COL4A3BP-201ENST00000261415 FAM189A2Q15884 450 aa15.94■□□□□ 0.14
COL4A3BP-201ENST00000261415 RNF151Q2KHN1 245 aa15.94■□□□□ 0.14
COL4A3BP-201ENST00000261415 ZG16O60844 167 aa15.93■□□□□ 0.14
COL4A3BP-201ENST00000261415 CRYAAP02489 173 aa15.93■□□□□ 0.14
COL4A3BP-201ENST00000261415 OR5AS1Q8N127 324 aa15.93■□□□□ 0.14
COL4A3BP-201ENST00000261415 SLC25A40Q8TBP6 338 aa15.93■□□□□ 0.14
COL4A3BP-201ENST00000261415 MRPL24Q96A35 216 aaKnown RBP15.93■□□□□ 0.14
COL4A3BP-201ENST00000261415 GNPNAT1Q96EK6 184 aaPredicted RBP15.93■□□□□ 0.14
COL4A3BP-201ENST00000261415 PLK3Q9H4B4 646 aa15.93■□□□□ 0.14
COL4A3BP-201ENST00000261415 ANKHD1Q8IWZ3 2542 aaKnown RBP15.93■□□□□ 0.14
COL4A3BP-201ENST00000261415 IGKV1-9A0A0C4DH69 117 aa15.93■□□□□ 0.14
COL4A3BP-201ENST00000261415 CNN1P51911 297 aaKnown RBP15.93■□□□□ 0.14
COL4A3BP-201ENST00000261415 DMRTC1Q5HYR2 192 aa15.93■□□□□ 0.14
COL4A3BP-201ENST00000261415 TMEM37Q8WXS4 190 aa15.93■□□□□ 0.14
COL4A3BP-201ENST00000261415 Q9N2K0 584 aa15.93■□□□□ 0.14
COL4A3BP-201ENST00000261415 CISD1Q9NZ45 108 aaKnown RBP15.93■□□□□ 0.14
COL4A3BP-201ENST00000261415 RCL1Q9Y2P8 373 aaKnown RBP15.93■□□□□ 0.14
COL4A3BP-201ENST00000261415 ZNF462Q96JM2 2506 aa15.92■□□□□ 0.14
COL4A3BP-201ENST00000261415 TRAV1-1A0A0B4J248 108 aa15.92■□□□□ 0.14
COL4A3BP-201ENST00000261415 ZNF816-ZNF321PA0A0X1KG74 233 aa15.92■□□□□ 0.14
COL4A3BP-201ENST00000261415 TOMM40O96008 361 aa15.92■□□□□ 0.14
COL4A3BP-201ENST00000261415 CD40P25942 277 aa15.92■□□□□ 0.14
COL4A3BP-201ENST00000261415 TMEM42Q69YG0 159 aa15.92■□□□□ 0.14
COL4A3BP-201ENST00000261415 P2RX4Q99571 388 aa15.92■□□□□ 0.14
COL4A3BP-201ENST00000261415 LYRM2Q9NU23 88 aaPredicted RBP15.92■□□□□ 0.14
COL4A3BP-201ENST00000261415 MAP1LC3B2A6NCE7 125 aa15.92■□□□□ 0.14
COL4A3BP-201ENST00000261415 CBY3A6NI87 242 aa15.92■□□□□ 0.14
COL4A3BP-201ENST00000261415 TMEM14DPA8MWL7 114 aa15.92■□□□□ 0.14
COL4A3BP-201ENST00000261415 NDUFS8O00217 210 aa15.92■□□□□ 0.14
COL4A3BP-201ENST00000261415 HIST1H1DP16402 221 aaKnown RBP15.92■□□□□ 0.14
COL4A3BP-201ENST00000261415 TFF3Q07654 80 aa15.92■□□□□ 0.14
COL4A3BP-201ENST00000261415 TMEM108Q6UXF1 575 aa15.92■□□□□ 0.14
COL4A3BP-201ENST00000261415 LYG1Q8N1E2 194 aa15.92■□□□□ 0.14
COL4A3BP-201ENST00000261415 OR51G1Q8NGK1 321 aa15.92■□□□□ 0.14
COL4A3BP-201ENST00000261415 ITLN2Q8WWU7 325 aaPredicted RBP15.92■□□□□ 0.14
COL4A3BP-201ENST00000261415 CIB3Q96Q77 187 aaPredicted RBP15.92■□□□□ 0.14
COL4A3BP-201ENST00000261415 ABHD14AQ9BUJ0 271 aa15.92■□□□□ 0.14
COL4A3BP-201ENST00000261415 MAP1LC3BQ9GZQ8 125 aa15.92■□□□□ 0.14
COL4A3BP-201ENST00000261415 CD300LBA8K4G0 201 aa15.91■□□□□ 0.14
COL4A3BP-201ENST00000261415 ST8SIA3O43173 380 aa15.91■□□□□ 0.14
COL4A3BP-201ENST00000261415 LINC01551Q86U37 167 aa15.91■□□□□ 0.14
COL4A3BP-201ENST00000261415 FBXL14Q8N1E6 418 aa15.91■□□□□ 0.14
COL4A3BP-201ENST00000261415 CSNK2A3Q8NEV1 391 aa15.91■□□□□ 0.14
COL4A3BP-201ENST00000261415 OR1L6Q8NGR2 347 aa15.91■□□□□ 0.14
COL4A3BP-201ENST00000261415 SDSLQ96GA7 329 aa15.91■□□□□ 0.14
COL4A3BP-201ENST00000261415 VAMP8Q9BV40 100 aa15.91■□□□□ 0.14
COL4A3BP-201ENST00000261415 EHFQ9NZC4 300 aa15.91■□□□□ 0.14
COL4A3BP-201ENST00000261415 CLEC18AA5D8T8 446 aa15.91■□□□□ 0.14
COL4A3BP-201ENST00000261415 CRYM-AS1A6NIL9 109 aa15.91■□□□□ 0.14
COL4A3BP-201ENST00000261415 ZNF732B4DXR9 585 aa15.91■□□□□ 0.14
COL4A3BP-201ENST00000261415 GNMTQ14749 295 aa15.91■□□□□ 0.14
COL4A3BP-201ENST00000261415 TOMM20LQ6UXN7 152 aa15.91■□□□□ 0.14
COL4A3BP-201ENST00000261415 CLEC18CQ8NCF0 446 aa15.91■□□□□ 0.14
COL4A3BP-201ENST00000261415 KLF14Q8TD94 323 aaPredicted RBP15.91■□□□□ 0.14
COL4A3BP-201ENST00000261415 SPACA5Q96QH8 159 aa15.91■□□□□ 0.14
COL4A3BP-201ENST00000261415 VPS25Q9BRG1 176 aa15.91■□□□□ 0.14
COL4A3BP-201ENST00000261415 CSTL1Q9H114 145 aa15.91■□□□□ 0.14
COL4A3BP-201ENST00000261415 ELL3Q9HB65 397 aaPredicted RBP15.91■□□□□ 0.14
COL4A3BP-201ENST00000261415 TMEM106BQ9NUM4 274 aa15.91■□□□□ 0.14
COL4A3BP-201ENST00000261415 CRIM1Q9NZV1 1036 aa15.91■□□□□ 0.14
COL4A3BP-201ENST00000261415 FUT9Q9Y231 359 aa15.91■□□□□ 0.14
COL4A3BP-201ENST00000261415 TMEM238C9JI98 176 aa15.9■□□□□ 0.14
COL4A3BP-201ENST00000261415 NRASP01111 189 aa15.9■□□□□ 0.14
COL4A3BP-201ENST00000261415 CTSDP07339 412 aaPredicted RBP15.9■□□□□ 0.14
COL4A3BP-201ENST00000261415 TUBG1P23258 451 aa15.9■□□□□ 0.14
COL4A3BP-201ENST00000261415 EWSR1Q01844 656 aaKnown RBP eCLIP15.9■□□□□ 0.14
COL4A3BP-201ENST00000261415 C1orf174Q8IYL3 243 aa15.9■□□□□ 0.14
COL4A3BP-201ENST00000261415 PIGCQ92535 297 aa15.9■□□□□ 0.14
COL4A3BP-201ENST00000261415 TUBG2Q9NRH3 451 aa15.9■□□□□ 0.14
COL4A3BP-201ENST00000261415 ICE1Q9Y2F5 2266 aa15.9■□□□□ 0.14
COL4A3BP-201ENST00000261415 PITX3O75364 302 aa15.89■□□□□ 0.13
COL4A3BP-201ENST00000261415 TYMSP04818 313 aa15.89■□□□□ 0.13
COL4A3BP-201ENST00000261415 GALR1P47211 349 aa15.89■□□□□ 0.13
COL4A3BP-201ENST00000261415 GNB2P62879 340 aa15.89■□□□□ 0.13
COL4A3BP-201ENST00000261415 CENPVQ7Z7K6 275 aaPredicted RBP15.89■□□□□ 0.13
COL4A3BP-201ENST00000261415 ZNF808Q8N4W9 903 aaPredicted RBP15.89■□□□□ 0.13
COL4A3BP-201ENST00000261415 SSC4DQ8WTU2 575 aa15.89■□□□□ 0.13
COL4A3BP-201ENST00000261415 FAM208BQ5VWN6 2430 aa15.89■□□□□ 0.13
COL4A3BP-201ENST00000261415 FLNCQ14315 2725 aa15.89■□□□□ 0.13
COL4A3BP-201ENST00000261415 CHD6Q8TD26 2715 aa15.89■□□□□ 0.13
COL4A3BP-201ENST00000261415 DPRXA6NFQ7 191 aa15.89■□□□□ 0.13
COL4A3BP-201ENST00000261415 YPEL1O60688 119 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms