RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 TEX36Q5VZQ5 186 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 C12orf54Q6X4T0 127 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 FAM183BPQ6ZVS7 135 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 OAFQ86UD1 273 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 ZNF567Q8N184 647 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 FAM24BQ8N5W8 94 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 NPWQ8N729 165 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 OR5A1Q8NGJ0 315 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 PTX4Q96A99 478 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 ISOC1Q96CN7 298 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 DIRAS2Q96HU8 199 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 FAM19A4Q96LR4 140 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 RDH12Q96NR8 316 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 REG4Q9BYZ8 158 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 OR51I1Q9H343 314 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 VSIRQ9H7M9 311 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 UBQLN4Q9NRR5 601 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 CISHQ9NSE2 258 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 RBFOX1Q9NWB1 397 aaKnown RBP2.85□□□□□ -1.95
CCDC54-201ENST00000261058 DNAJC27Q9NZQ0 273 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 XCL2Q9UBD3 114 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 NAT8BQ9UHF3 227 aa2.85□□□□□ -1.95
CCDC54-201ENST00000261058 MYH7P12883 1935 aa2.84□□□□□ -1.95
CCDC54-201ENST00000261058 NALCNQ8IZF0 1738 aa2.84□□□□□ -1.95
CCDC54-201ENST00000261058 TOP2AP11388 1531 aaKnown RBP2.84□□□□□ -1.95
CCDC54-201ENST00000261058 NAIPQ13075 1403 aa2.84□□□□□ -1.95
CCDC54-201ENST00000261058 TNS3Q68CZ2 1445 aa2.84□□□□□ -1.95
CCDC54-201ENST00000261058 A0A0U1RQV1 116 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 A0A1B0GX51 115 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 MFNGO00587 321 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 KLF8O95600 359 aaPredicted RBP2.84□□□□□ -1.96
CCDC54-201ENST00000261058 NRASP01111 189 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 GYPCP04921 128 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 CD2P06729 351 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 GGT1P19440 569 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 TCN2P20062 427 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 NPY1RP25929 384 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 BTCP35070 178 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 LHX2P50458 406 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 HSPE1P61604 102 aaKnown RBP2.84□□□□□ -1.96
CCDC54-201ENST00000261058 CAV1Q03135 178 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 PPP1R1AQ13522 171 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 KIAA0087Q14695 138 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 OR8B8Q15620 311 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 SSX1Q16384 188 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 MESTQ5EB52 335 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 TMEM255AQ5JRV8 349 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 C1orf195Q5TG92 126 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 TMEM215Q68D42 235 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 EIF5AL1Q6IS14 154 aaKnown RBP2.84□□□□□ -1.96
CCDC54-201ENST00000261058 Q6ZVH6 145 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 MRPL55Q7Z7F7 128 aaKnown RBP2.84□□□□□ -1.96
CCDC54-201ENST00000261058 CALHM3Q86XJ0 350 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 TMEM61Q8N0U2 210 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 UMODL1-AS1Q8N2C9 162 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 OSR2Q8N2R0 312 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 SVBPQ8N300 66 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 OR52L1Q8NGH7 329 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 OR1L8Q8NGR8 309 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 OR2K2Q8NGT1 345 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 ZNF418Q8TF45 676 aaPredicted RBP2.84□□□□□ -1.96
CCDC54-201ENST00000261058 AURKBQ96GD4 344 aaPredicted RBP2.84□□□□□ -1.96
CCDC54-201ENST00000261058 DCUN1D1Q96GG9 259 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 CCDC115Q96NT0 180 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 OR2M4Q96R27 311 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 EBPLQ9BY08 206 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 SLC17A9Q9BYT1 436 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 GPR84Q9NQS5 396 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 NAT8Q9UHE5 227 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 VAX2Q9UIW0 290 aa2.84□□□□□ -1.96
CCDC54-201ENST00000261058 MCTS1Q9ULC4 181 aaKnown RBP2.84□□□□□ -1.96
CCDC54-201ENST00000261058 RTEL1-TNFRSF6BF6WH68 1400 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 NSD3Q9BZ95 1437 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 CCDC88BA6NC98 1476 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 DENND4BO75064 1496 aaPredicted RBP2.83□□□□□ -1.96
CCDC54-201ENST00000261058 SETD1AO15047 1707 aaKnown RBP2.83□□□□□ -1.96
CCDC54-201ENST00000261058 PALLDQ8WX93 1383 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 A0A087WXM4 84 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 IGHV3-64DA0A0J9YX35 117 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 RBMY1BA6NDE4 496 aaKnown RBP2.83□□□□□ -1.96
CCDC54-201ENST00000261058 RBMY1EA6NEQ0 496 aaKnown RBP2.83□□□□□ -1.96
CCDC54-201ENST00000261058 J3KT08 172 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 M0R2Z0 102 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 PDCD5O14737 125 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 MRPS14O60783 128 aaKnown RBP2.83□□□□□ -1.96
CCDC54-201ENST00000261058 APODP05090 189 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 MMP7P09237 267 aaPredicted RBP2.83□□□□□ -1.96
CCDC54-201ENST00000261058 RBMY1DP0C7P1 496 aaKnown RBP2.83□□□□□ -1.96
CCDC54-201ENST00000261058 RBMY1A1P0DJD3 496 aaKnown RBP2.83□□□□□ -1.96
CCDC54-201ENST00000261058 ATF1P18846 271 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 EVI2AP22794 236 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 GLRXP35754 106 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 MTPNP58546 118 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 NCS1P62166 190 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 PRR3P79522 188 aaKnown RBP2.83□□□□□ -1.96
CCDC54-201ENST00000261058 FZD2Q14332 565 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 ZNF404Q494X3 552 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 FAM74A1Q5RGS3 127 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 Q6P435 159 aa2.83□□□□□ -1.96
CCDC54-201ENST00000261058 PRSS54Q6PEW0 395 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms