RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 CALHM1Q8IU99 346 aa9.11□□□□□ -0.95
CHRNA1-201ENST00000261007 OR4F5Q8NH21 305 aa9.11□□□□□ -0.95
CHRNA1-201ENST00000261007 OR4F4Q96R69 305 aa9.11□□□□□ -0.95
CHRNA1-201ENST00000261007 TBX15Q96SF7 602 aa9.11□□□□□ -0.95
CHRNA1-201ENST00000261007 PKIBQ9C010 78 aa9.11□□□□□ -0.95
CHRNA1-201ENST00000261007 PARD6AQ9NPB6 346 aa9.11□□□□□ -0.95
CHRNA1-201ENST00000261007 OR2W1Q9Y3N9 320 aa9.11□□□□□ -0.95
CHRNA1-201ENST00000261007 AHCTF1Q8WYP5 2266 aa9.11□□□□□ -0.95
CHRNA1-201ENST00000261007 PCNX2A6NKB5 2137 aa9.11□□□□□ -0.95
CHRNA1-201ENST00000261007 IGKV1-6A0A0C4DH72 117 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 AQP7O14520 342 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 TMPRSS2O15393 492 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 SOX15O60248 233 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 YPEL1O60688 119 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 LILRA1O75019 489 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 ESDP10768 282 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 IL3RAP26951 378 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 BRS3P32247 399 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 FOXG1P55316 489 aaPredicted RBP9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 RTP5Q14D33 572 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 ZNF324BQ6AW86 544 aaPredicted RBP9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 PCSK4Q6UW60 755 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 Q6ZRM9 215 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 OR5P3Q8WZ94 311 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 YPEL2Q96QA6 119 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 GPHA2Q96T91 129 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 C12orf49Q9H741 205 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 CHODLQ9H9P2 273 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 TMEM106BQ9NUM4 274 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 CLCF1Q9UBD9 225 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 CACNG5Q9UF02 275 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 KNTC1P50748 2209 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 ARHGAP21Q5T5U3 1957 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 IGKV1D-33P01593 117 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 IGKV1-33P01594 117 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 NPSP0C0P6 89 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 IAPPP10997 89 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 PSG2P11465 335 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 SELEP16581 610 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 GPM6AP51674 278 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 PRSS12P56730 875 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 YPEL3P61236 119 aaPredicted RBP9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 PPP1CBP62140 327 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 SELENOTP62341 195 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 SLC38A11Q08AI6 406 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 RNFT1Q5M7Z0 435 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 TMEM14EPQ6UXP3 125 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 SARAFQ96BY9 339 aa9.1□□□□□ -0.95
CHRNA1-201ENST00000261007 MED13Q9UHV7 2174 aa9.09□□□□□ -0.95
CHRNA1-201ENST00000261007 A0A0U1RQK1 487 aa9.09□□□□□ -0.95
CHRNA1-201ENST00000261007 SPAARA0A1B0GVQ0 90 aa9.09□□□□□ -0.95
CHRNA1-201ENST00000261007 ZNF320A2RRD8 509 aa9.09□□□□□ -0.95
CHRNA1-201ENST00000261007 ZNF503-AS2A6NEH8 195 aa9.09□□□□□ -0.95
CHRNA1-201ENST00000261007 ZNF891A8MT65 544 aaPredicted RBP9.09□□□□□ -0.95
CHRNA1-201ENST00000261007 NPIPB11E5RHQ5 1161 aa9.09□□□□□ -0.95
CHRNA1-201ENST00000261007 TNFSF12O43508 249 aa9.09□□□□□ -0.95
CHRNA1-201ENST00000261007 IRF2P14316 349 aa9.09□□□□□ -0.95
CHRNA1-201ENST00000261007 BCL3P20749 454 aa9.09□□□□□ -0.95
CHRNA1-201ENST00000261007 CCL11P51671 97 aa9.09□□□□□ -0.95
CHRNA1-201ENST00000261007 TPPP2P59282 170 aa9.09□□□□□ -0.95
CHRNA1-201ENST00000261007 TESK1Q15569 626 aa9.09□□□□□ -0.95
CHRNA1-201ENST00000261007 TMEM183BQ1AE95 376 aa9.09□□□□□ -0.95
CHRNA1-201ENST00000261007 CLEC12BQ2HXU8 276 aa9.09□□□□□ -0.95
CHRNA1-201ENST00000261007 FAM78BQ5VT40 261 aa9.09□□□□□ -0.95
CHRNA1-201ENST00000261007 INO80CQ6PI98 192 aaPredicted RBP9.09□□□□□ -0.95
CHRNA1-201ENST00000261007 MDP1Q86V88 176 aa9.09□□□□□ -0.95
CHRNA1-201ENST00000261007 Q8IYB0 196 aa9.09□□□□□ -0.95
CHRNA1-201ENST00000261007 C1orf162Q8NEQ5 155 aaPredicted RBP9.09□□□□□ -0.95
CHRNA1-201ENST00000261007 LPAR2Q9HBW0 351 aa9.09□□□□□ -0.95
CHRNA1-201ENST00000261007 TUBG2Q9NRH3 451 aa9.09□□□□□ -0.95
CHRNA1-201ENST00000261007 SHANK1Q9Y566 2161 aa9.09□□□□□ -0.95
CHRNA1-201ENST00000261007 NKX2-8O15522 239 aa9.08□□□□□ -0.96
CHRNA1-201ENST00000261007 PDE6DO43924 150 aa9.08□□□□□ -0.96
CHRNA1-201ENST00000261007 NGFP01138 241 aa9.08□□□□□ -0.96
CHRNA1-201ENST00000261007 IGKV1-39P01597 117 aa9.08□□□□□ -0.96
CHRNA1-201ENST00000261007 IGKV1D-39P04432 117 aa9.08□□□□□ -0.96
CHRNA1-201ENST00000261007 CCL2P13500 99 aa9.08□□□□□ -0.96
CHRNA1-201ENST00000261007 PCP4P48539 62 aa9.08□□□□□ -0.96
CHRNA1-201ENST00000261007 TMEM249Q2WGJ8 235 aa9.08□□□□□ -0.96
CHRNA1-201ENST00000261007 ARSJQ5FYB0 599 aaPredicted RBP9.08□□□□□ -0.96
CHRNA1-201ENST00000261007 ACSM6Q6P461 480 aa9.08□□□□□ -0.96
CHRNA1-201ENST00000261007 FAM214BQ7L5A3 538 aa9.08□□□□□ -0.96
CHRNA1-201ENST00000261007 VASH2Q86V25 355 aa9.08□□□□□ -0.96
CHRNA1-201ENST00000261007 TMEM256Q8N2U0 113 aa9.08□□□□□ -0.96
CHRNA1-201ENST00000261007 FDCSPQ8NFU4 85 aa9.08□□□□□ -0.96
CHRNA1-201ENST00000261007 OR10G9Q8NGN4 311 aa9.08□□□□□ -0.96
CHRNA1-201ENST00000261007 OR10G7Q8NGN6 311 aa9.08□□□□□ -0.96
CHRNA1-201ENST00000261007 CMTM2Q8TAZ6 248 aa9.08□□□□□ -0.96
CHRNA1-201ENST00000261007 RTL8AQ9BWD3 113 aa9.08□□□□□ -0.96
CHRNA1-201ENST00000261007 OR51B6Q9H340 312 aa9.08□□□□□ -0.96
CHRNA1-201ENST00000261007 GPR179Q6PRD1 2367 aa9.08□□□□□ -0.96
CHRNA1-201ENST00000261007 CNTRLQ7Z7A1 2325 aa9.08□□□□□ -0.96
CHRNA1-201ENST00000261007 TRAV9-1A0A075B6T8 112 aa9.08□□□□□ -0.96
CHRNA1-201ENST00000261007 UBE2L5PA0A1B0GUS4 154 aa9.08□□□□□ -0.96
CHRNA1-201ENST00000261007 J3QT63 122 aa9.08□□□□□ -0.96
CHRNA1-201ENST00000261007 HS3ST1O14792 307 aa9.08□□□□□ -0.96
CHRNA1-201ENST00000261007 IGKV1-5P01602 117 aa9.08□□□□□ -0.96
CHRNA1-201ENST00000261007 IL6RP08887 468 aaPredicted RBP9.08□□□□□ -0.96
CHRNA1-201ENST00000261007 COX5AP20674 150 aa9.08□□□□□ -0.96
CHRNA1-201ENST00000261007 WNT5AP41221 380 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms