RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 ZNF841Q6ZN19 808 aa3.45□□□□□ -1.86
RNF38-201ENST00000259605 SLC22A18ASQ8N1D0 253 aa3.45□□□□□ -1.86
RNF38-201ENST00000259605 PIP4P2Q8N4L2 257 aa3.45□□□□□ -1.86
RNF38-201ENST00000259605 TMEM37Q8WXS4 190 aa3.45□□□□□ -1.86
RNF38-201ENST00000259605 RHOVQ96L33 236 aa3.45□□□□□ -1.86
RNF38-201ENST00000259605 MMP28Q9H239 520 aa3.45□□□□□ -1.86
RNF38-201ENST00000259605 BET1LQ9NYM9 111 aa3.45□□□□□ -1.86
RNF38-201ENST00000259605 TNFSF18Q9UNG2 199 aa3.45□□□□□ -1.86
RNF38-201ENST00000259605 IGHV2OR16-5A0A0B4J2B6 119 aa3.45□□□□□ -1.86
RNF38-201ENST00000259605 C5orf52A6NGY3 159 aa3.45□□□□□ -1.86
RNF38-201ENST00000259605 RPL36A-HNRNPH2H7BZ11 118 aa3.45□□□□□ -1.86
RNF38-201ENST00000259605 NTN3O00634 580 aaPredicted RBP3.45□□□□□ -1.86
RNF38-201ENST00000259605 OVOL1O14753 267 aa3.45□□□□□ -1.86
RNF38-201ENST00000259605 UPK3AO75631 287 aa3.45□□□□□ -1.86
RNF38-201ENST00000259605 ZNF708P17019 499 aa3.45□□□□□ -1.86
RNF38-201ENST00000259605 CNTFRP26992 372 aa3.45□□□□□ -1.86
RNF38-201ENST00000259605 RPS10P46783 165 aaKnown RBP3.45□□□□□ -1.86
RNF38-201ENST00000259605 SURF2Q15527 256 aaPredicted RBP3.45□□□□□ -1.86
RNF38-201ENST00000259605 KHDC1Q4VXA5 237 aaKnown RBP3.45□□□□□ -1.86
RNF38-201ENST00000259605 FAM78BQ5VT40 261 aa3.45□□□□□ -1.86
RNF38-201ENST00000259605 SPSB3Q6PJ21 355 aa3.45□□□□□ -1.86
RNF38-201ENST00000259605 ZDHHC22Q8N966 263 aa3.45□□□□□ -1.86
RNF38-201ENST00000259605 OR2D3Q8NGH3 330 aa3.45□□□□□ -1.86
RNF38-201ENST00000259605 TMEM190Q8WZ59 177 aa3.45□□□□□ -1.86
RNF38-201ENST00000259605 ALG14Q96F25 216 aa3.45□□□□□ -1.86
RNF38-201ENST00000259605 ABHD14BQ96IU4 210 aa3.45□□□□□ -1.86
RNF38-201ENST00000259605 SLC2A9Q9NRM0 540 aa3.45□□□□□ -1.86
RNF38-201ENST00000259605 FLRT3Q9NZU0 649 aa3.45□□□□□ -1.86
RNF38-201ENST00000259605 OPN4Q9UHM6 478 aa3.45□□□□□ -1.86
RNF38-201ENST00000259605 ST6GALNAC2Q9UJ37 374 aa3.45□□□□□ -1.86
RNF38-201ENST00000259605 ZNF256Q9Y2P7 627 aaPredicted RBP3.45□□□□□ -1.86
RNF38-201ENST00000259605 MYH1P12882 1939 aa3.45□□□□□ -1.86
RNF38-201ENST00000259605 NAV1Q8NEY1 1877 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 ELOA3CA0A087WX78 387 aaPredicted RBP3.44□□□□□ -1.86
RNF38-201ENST00000259605 LOC102724200A0A096LPH7 203 aaPredicted RBP3.44□□□□□ -1.86
RNF38-201ENST00000259605 TRAV14DV4A0A0A6YYC5 116 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 A0A0U1RQV5 110 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 TMEM250H0YL14 139 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 FSHBP01225 129 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 INSP01308 110 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 IGHV3-11P01762 117 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 RPL12P30050 165 aaKnown RBP3.44□□□□□ -1.86
RNF38-201ENST00000259605 SULT1A1P50225 295 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 RPL32P62910 135 aaKnown RBP3.44□□□□□ -1.86
RNF38-201ENST00000259605 PMS2P11Q13670 270 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 FAM74A4Q5TZK3 123 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 MRPL14Q6P1L8 145 aaKnown RBP3.44□□□□□ -1.86
RNF38-201ENST00000259605 CD200R1LQ6Q8B3 271 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 BCDIN3DQ7Z5W3 292 aaKnown RBP3.44□□□□□ -1.86
RNF38-201ENST00000259605 OR11H4Q8NGC9 324 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 EAF1Q96JC9 268 aaPredicted RBP3.44□□□□□ -1.86
RNF38-201ENST00000259605 TMEM204Q9BSN7 226 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 C19orf24Q9BVV8 132 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 WNT10AQ9GZT5 417 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 TSSC4Q9Y5U2 329 aaPredicted RBP3.44□□□□□ -1.86
RNF38-201ENST00000259605 OR9G9P0C7N8 305 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 PSG1P11464 419 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 DCTDP32321 178 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 EVX1P49640 407 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 RPL36AP83881 106 aaKnown RBP3.44□□□□□ -1.86
RNF38-201ENST00000259605 SERF2P84101 59 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 PSG4Q00888 419 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 IL24Q13007 206 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 TMEM128Q5BJH2 165 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 ZNF660Q6AZW8 331 aaPredicted RBP3.44□□□□□ -1.86
RNF38-201ENST00000259605 TEX261Q6UWH6 196 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 CLEC18BQ6UXF7 455 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 PRSS41Q7RTY9 318 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 ATG4DQ86TL0 474 aaPredicted RBP3.44□□□□□ -1.86
RNF38-201ENST00000259605 OR5AU1Q8NGC0 362 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 OR10W1Q8NGF6 305 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 OR5AN1Q8NGI8 311 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 NUDCD2Q8WVJ2 157 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 RPL36ALQ969Q0 106 aaKnown RBP3.44□□□□□ -1.86
RNF38-201ENST00000259605 FCRL1Q96LA6 429 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 CHST5Q9GZS9 411 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 NPVFQ9HCQ7 196 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 PGPEP1Q9NXJ5 209 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 TNRC6CQ9HCJ0 1690 aaKnown RBP3.44□□□□□ -1.86
RNF38-201ENST00000259605 MEX3AA1L020 520 aaKnown RBP3.44□□□□□ -1.86
RNF38-201ENST00000259605 F5H768 121 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 CD160O95971 181 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 CST4P01036 141 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 GZMBP10144 247 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 SCGB1A1P11684 91 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 FOXF2Q12947 444 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 TMEM187Q14656 261 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 MIDNQ504T8 468 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 FOXB2Q5VYV0 432 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 FAM90A2PQ658T7 463 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 TMUB2Q71RG4 321 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 C9orf106Q8NAJ2 232 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 OR52I1Q8NGK6 324 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 TAF15Q92804 592 aaKnown RBP eCLIP3.44□□□□□ -1.86
RNF38-201ENST00000259605 WDYHV1Q96HA8 205 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 ZNF488Q96MN9 340 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 TMPRSS13Q9BYE2 586 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 RIF1Q5UIP0 2472 aaKnown RBP3.44□□□□□ -1.86
RNF38-201ENST00000259605 NUP188Q5SRE5 1749 aa3.44□□□□□ -1.86
RNF38-201ENST00000259605 ZC3H12DA2A288 527 aaKnown RBP3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms