RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 KIF26AQ9ULI4 1882 aaPredicted RBP6.55□□□□□ -1.36
GPNMB-201ENST00000258733 DUXBA0A1W2PPF3 345 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 OTOL1A6NHN0 477 aaPredicted RBP6.55□□□□□ -1.36
GPNMB-201ENST00000258733 A8MZ25 164 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 H3BMH7 237 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 FGF10O15520 208 aaPredicted RBP6.55□□□□□ -1.36
GPNMB-201ENST00000258733 ARL6IP5O75915 188 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 AMY2AP04746 511 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 IFITM1P13164 125 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 IL3RAP26951 378 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 AQP1P29972 269 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 DRD3P35462 400 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 LY6DQ14210 128 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 TTC32Q5I0X7 151 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 TP53INP2Q8IXH6 220 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 OR5P3Q8WZ94 311 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 B9D1Q9UPM9 204 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 PKIGQ9Y2B9 76 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 HEBP2Q9Y5Z4 205 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 IGLV3-22A0A075B6J6 115 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 GCM2O75603 506 aaPredicted RBP6.55□□□□□ -1.36
GPNMB-201ENST00000258733 EML2O95834 649 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 CRYGDP07320 174 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 CT62P0C5K7 136 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 ACRV1P26436 265 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 NTF4P34130 210 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 G6PCP35575 357 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 CA7P43166 264 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 HHEXQ03014 270 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 GCSAMQ8N6F7 178 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 CLDND2Q8NHS1 167 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 ZNF501Q96CX3 271 aaPredicted RBP6.55□□□□□ -1.36
GPNMB-201ENST00000258733 RBMXL1Q96E39 390 aaKnown RBP6.55□□□□□ -1.36
GPNMB-201ENST00000258733 SLC25A10Q9UBX3 287 aaPredicted RBP6.55□□□□□ -1.36
GPNMB-201ENST00000258733 POLR1DQ9Y2S0 133 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 RAXQ9Y2V3 346 aa6.55□□□□□ -1.36
GPNMB-201ENST00000258733 POLR2AP24928 1970 aaKnown RBP6.54□□□□□ -1.36
GPNMB-201ENST00000258733 ANKRD36A6QL64 1941 aa6.54□□□□□ -1.36
GPNMB-201ENST00000258733 A0A087X0K7 114 aa6.54□□□□□ -1.36
GPNMB-201ENST00000258733 A0A1W2PPK0 400 aa6.54□□□□□ -1.36
GPNMB-201ENST00000258733 NPFFO15130 113 aa6.54□□□□□ -1.36
GPNMB-201ENST00000258733 KBTBD11O94819 623 aa6.54□□□□□ -1.36
GPNMB-201ENST00000258733 TACSTD2P09758 323 aa6.54□□□□□ -1.36
GPNMB-201ENST00000258733 FSTP19883 344 aa6.54□□□□□ -1.36
GPNMB-201ENST00000258733 AADACP22760 399 aa6.54□□□□□ -1.36
GPNMB-201ENST00000258733 CRYBB3P26998 211 aa6.54□□□□□ -1.36
GPNMB-201ENST00000258733 BLVRBP30043 206 aaPredicted RBP6.54□□□□□ -1.36
GPNMB-201ENST00000258733 RPL27P61353 136 aaKnown RBP6.54□□□□□ -1.36
GPNMB-201ENST00000258733 SLC35B1P78383 322 aa6.54□□□□□ -1.36
GPNMB-201ENST00000258733 RNPS1Q15287 305 aaKnown RBP6.54□□□□□ -1.36
GPNMB-201ENST00000258733 ZNF74Q16587 644 aa6.54□□□□□ -1.36
GPNMB-201ENST00000258733 ZNF841Q6ZN19 808 aa6.54□□□□□ -1.36
GPNMB-201ENST00000258733 C18orf32Q8TCD1 76 aa6.54□□□□□ -1.36
GPNMB-201ENST00000258733 VGLL1Q99990 258 aa6.54□□□□□ -1.36
GPNMB-201ENST00000258733 CISHQ9NSE2 258 aa6.54□□□□□ -1.36
GPNMB-201ENST00000258733 LIN7CQ9NUP9 197 aaKnown RBP6.54□□□□□ -1.36
GPNMB-201ENST00000258733 LHX3Q9UBR4 397 aa6.54□□□□□ -1.36
GPNMB-201ENST00000258733 MEIS3P1A6NDR6 274 aa6.54□□□□□ -1.36
GPNMB-201ENST00000258733 ZNF43P17038 809 aa6.54□□□□□ -1.36
GPNMB-201ENST00000258733 CD38P28907 300 aa6.54□□□□□ -1.36
GPNMB-201ENST00000258733 LGALS4P56470 323 aa6.54□□□□□ -1.36
GPNMB-201ENST00000258733 TAS2R46P59540 309 aa6.54□□□□□ -1.36
GPNMB-201ENST00000258733 RPS28P62857 69 aaKnown RBP6.54□□□□□ -1.36
GPNMB-201ENST00000258733 RPL38P63173 70 aaKnown RBP6.54□□□□□ -1.36
GPNMB-201ENST00000258733 SSBP1Q04837 148 aaKnown RBP6.54□□□□□ -1.36
GPNMB-201ENST00000258733 Q0VG73 95 aa6.54□□□□□ -1.36
GPNMB-201ENST00000258733 ENTPD8Q5MY95 495 aa6.54□□□□□ -1.36
GPNMB-201ENST00000258733 PIP4P1Q86T03 277 aa6.54□□□□□ -1.36
GPNMB-201ENST00000258733 SFXN3Q9BWM7 321 aa6.54□□□□□ -1.36
GPNMB-201ENST00000258733 SH3BGRL3Q9H299 93 aa6.54□□□□□ -1.36
GPNMB-201ENST00000258733 FAM124BQ9H5Z6 455 aaPredicted RBP6.54□□□□□ -1.36
GPNMB-201ENST00000258733 DHDHQ9UQ10 334 aa6.54□□□□□ -1.36
GPNMB-201ENST00000258733 INSL5Q9Y5Q6 135 aa6.54□□□□□ -1.36
GPNMB-201ENST00000258733 SSC5DA1L4H1 1573 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 CRYAAP02489 173 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 GPR183P32249 361 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 S100A3P33764 101 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 IER3P46695 156 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 CR1LQ2VPA4 569 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 LCN12Q6JVE5 192 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 HRCT1Q6UXD1 115 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 ZNF550Q7Z398 422 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 PPP1R27Q86WC6 154 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 SLC22A18ASQ8N1D0 253 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 VN1R2Q8NFZ6 395 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 OR4C13Q8NGP0 309 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 ARPC1AQ92747 370 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 BORCS7Q96B45 105 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 ZG16BQ96DA0 208 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 SNRNP40Q96DI7 357 aaKnown RBP6.53□□□□□ -1.36
GPNMB-201ENST00000258733 RNF181Q9P0P0 153 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 ST6GALNAC2Q9UJ37 374 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 PRNDQ9UKY0 176 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 RCL1Q9Y2P8 373 aaKnown RBP6.53□□□□□ -1.36
GPNMB-201ENST00000258733 TNRC18O15417 2968 aaPredicted RBP6.53□□□□□ -1.36
GPNMB-201ENST00000258733 TRPM6Q9BX84 2022 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 LOC102723971A0A1B0GUV8 181 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 ZG16O60844 167 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 ZNF737O75373 536 aa6.53□□□□□ -1.36
GPNMB-201ENST00000258733 MEOX1P50221 254 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms