RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 HIST3H3Q16695 136 aa7.46□□□□□ -1.21
PTCD3-201ENST00000254630 C19orf54Q5BKX5 351 aa7.46□□□□□ -1.21
PTCD3-201ENST00000254630 OR5AU1Q8NGC0 362 aa7.46□□□□□ -1.21
PTCD3-201ENST00000254630 GPR146Q96CH1 333 aa7.46□□□□□ -1.21
PTCD3-201ENST00000254630 OR2A7Q96R45 310 aa7.46□□□□□ -1.21
PTCD3-201ENST00000254630 NCMAPQ5T1S8 102 aa7.46□□□□□ -1.21
PTCD3-201ENST00000254630 C10orf128Q5T292 105 aa7.46□□□□□ -1.21
PTCD3-201ENST00000254630 MUC15Q8N387 334 aa7.46□□□□□ -1.21
PTCD3-201ENST00000254630 ISOC2Q96AB3 205 aa7.46□□□□□ -1.21
PTCD3-201ENST00000254630 AURKAIP1Q9NWT8 199 aaPredicted RBP7.46□□□□□ -1.21
PTCD3-201ENST00000254630 SLC25A17O43808 307 aa7.46□□□□□ -1.22
PTCD3-201ENST00000254630 MPDU1O75352 247 aa7.46□□□□□ -1.22
PTCD3-201ENST00000254630 THY1P04216 161 aa7.46□□□□□ -1.22
PTCD3-201ENST00000254630 MAS1LP35410 378 aa7.46□□□□□ -1.22
PTCD3-201ENST00000254630 ARF6P62330 175 aa7.46□□□□□ -1.22
PTCD3-201ENST00000254630 CENPVQ7Z7K6 275 aaPredicted RBP7.46□□□□□ -1.22
PTCD3-201ENST00000254630 TMEM186Q96B77 213 aa7.46□□□□□ -1.22
PTCD3-201ENST00000254630 PITPNC1Q9UKF7 332 aa7.46□□□□□ -1.22
PTCD3-201ENST00000254630 A0A1W2PP11 408 aa7.46□□□□□ -1.22
PTCD3-201ENST00000254630 ZNF343Q6P1L6 599 aa7.46□□□□□ -1.22
PTCD3-201ENST00000254630 PACRGQ96M98 296 aaPredicted RBP7.46□□□□□ -1.22
PTCD3-201ENST00000254630 RECKO95980 971 aa7.46□□□□□ -1.22
PTCD3-201ENST00000254630 CD74P04233 296 aa7.46□□□□□ -1.22
PTCD3-201ENST00000254630 AMY1AP04745 511 aa7.46□□□□□ -1.22
PTCD3-201ENST00000254630 BCL2P10415 239 aa7.46□□□□□ -1.22
PTCD3-201ENST00000254630 HERPUD1Q15011 391 aa7.46□□□□□ -1.22
PTCD3-201ENST00000254630 ZNF146Q15072 292 aa7.46□□□□□ -1.22
PTCD3-201ENST00000254630 OR9G1Q8NH87 305 aa7.46□□□□□ -1.22
PTCD3-201ENST00000254630 FAM57AQ8TBR7 257 aa7.46□□□□□ -1.22
PTCD3-201ENST00000254630 ATG101Q9BSB4 218 aa7.46□□□□□ -1.22
PTCD3-201ENST00000254630 S1PR2O95136 353 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 DCAF12L2Q5VW00 463 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 Q6ZT83 130 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 OR52M1Q8NGK5 317 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 LSM10Q969L4 123 aaKnown RBP7.45□□□□□ -1.22
PTCD3-201ENST00000254630 CTHRC1Q96CG8 243 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 Q96M66 194 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 RSG1Q9BU20 258 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 QTRT1Q9BXR0 403 aaKnown RBP7.45□□□□□ -1.22
PTCD3-201ENST00000254630 HSF4Q9ULV5 492 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 CHCHD2Q9Y6H1 151 aaPredicted RBP7.45□□□□□ -1.22
PTCD3-201ENST00000254630 ZSWIM8A7E2V4 1837 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 FAM74A7A6NL05 159 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 KLF7O75840 302 aaPredicted RBP7.45□□□□□ -1.22
PTCD3-201ENST00000254630 CX3CL1P78423 397 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 SPSB2Q99619 263 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 NYNRINQ9P2P1 1898 aaKnown RBP7.45□□□□□ -1.22
PTCD3-201ENST00000254630 IGKV3D-15A0A087WSY6 115 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 NPIPB11E5RHQ5 1161 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 M0R143 59 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 GCM2O75603 506 aaPredicted RBP7.45□□□□□ -1.22
PTCD3-201ENST00000254630 IGKV3-15P01624 115 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 CELA3AP09093 270 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 PTGDSP41222 190 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 SERF2P84101 59 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 RUNX1Q01196 453 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 AMMECR1LQ6DCA0 310 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 A0A0G2JMM0 328 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 A0A1W2PPB8 328 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 A0A1W2PRS3 328 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 FAM181BA6NEQ2 426 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 KIR3DP1A8MWS1 328 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 H3BVH4 76 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 ZNF207O43670 478 aaKnown RBP7.45□□□□□ -1.22
PTCD3-201ENST00000254630 PLAUP00749 431 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 BTF3P20290 206 aaKnown RBP7.45□□□□□ -1.22
PTCD3-201ENST00000254630 SIGIRRQ6IA17 410 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 ZFP30Q9Y2G7 519 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 CASP8AP2Q9UKL3 1982 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 CEACAM1P13688 526 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 GLIPR1P48060 266 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 LCN2P80188 198 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 RIPPLY2Q5TAB7 128 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 SIAH2O43255 324 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 C1orf100Q5SVJ3 147 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 ZNF818PQ6ZRF7 136 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 CHRNA10Q9GZZ6 450 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 HSPB7Q9UBY9 170 aa7.45□□□□□ -1.22
PTCD3-201ENST00000254630 M0R3E3 92 aa7.44□□□□□ -1.22
PTCD3-201ENST00000254630 RFPL3SP0C7P2 107 aa7.44□□□□□ -1.22
PTCD3-201ENST00000254630 CXCL2P19875 107 aa7.44□□□□□ -1.22
PTCD3-201ENST00000254630 PLAURQ03405 335 aa7.44□□□□□ -1.22
PTCD3-201ENST00000254630 SRSF9Q13242 221 aaKnown RBP eCLIP7.44□□□□□ -1.22
PTCD3-201ENST00000254630 FXYD3Q14802 87 aa7.44□□□□□ -1.22
PTCD3-201ENST00000254630 MIC13Q5XKP0 118 aa7.44□□□□□ -1.22
PTCD3-201ENST00000254630 SLC16A13Q7RTY0 426 aa7.44□□□□□ -1.22
PTCD3-201ENST00000254630 CBLN2Q8IUK8 224 aa7.44□□□□□ -1.22
PTCD3-201ENST00000254630 OR1N2Q8NGR9 330 aa7.44□□□□□ -1.22
PTCD3-201ENST00000254630 MEGF10Q96KG7 1140 aa7.44□□□□□ -1.22
PTCD3-201ENST00000254630 PGLYRP4Q96LB8 373 aa7.44□□□□□ -1.22
PTCD3-201ENST00000254630 ALX4Q9H161 411 aaPredicted RBP7.44□□□□□ -1.22
PTCD3-201ENST00000254630 TRPM6Q9BX84 2022 aa7.44□□□□□ -1.22
PTCD3-201ENST00000254630 ANOS1P23352 680 aa7.44□□□□□ -1.22
PTCD3-201ENST00000254630 RND2P52198 227 aa7.44□□□□□ -1.22
PTCD3-201ENST00000254630 BSPH1Q075Z2 132 aa7.44□□□□□ -1.22
PTCD3-201ENST00000254630 IBA57Q5T440 356 aaKnown RBP7.44□□□□□ -1.22
PTCD3-201ENST00000254630 ACP7Q6ZNF0 438 aa7.44□□□□□ -1.22
PTCD3-201ENST00000254630 VKORC1L1Q8N0U8 176 aa7.44□□□□□ -1.22
PTCD3-201ENST00000254630 FGFRL1Q8N441 504 aa7.44□□□□□ -1.22
PTCD3-201ENST00000254630 OR4C13Q8NGP0 309 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms