RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 KLHDC7BQ96G42 594 aa15.55■□□□□ 0.08
PTPN12-201ENST00000248594 G3V3Y1 287 aa15.55■□□□□ 0.08
PTPN12-201ENST00000248594 SNAI2O43623 268 aa15.55■□□□□ 0.08
PTPN12-201ENST00000248594 NUDT3O95989 172 aa15.55■□□□□ 0.08
PTPN12-201ENST00000248594 UCP1P25874 307 aa15.55■□□□□ 0.08
PTPN12-201ENST00000248594 CDC34P49427 236 aaPredicted RBP15.55■□□□□ 0.08
PTPN12-201ENST00000248594 GVINP1Q7Z2Y8 2422 aa15.54■□□□□ 0.08
PTPN12-201ENST00000248594 IGHV2-70DA0A0C4DH43 119 aa15.54■□□□□ 0.08
PTPN12-201ENST00000248594 DEFB133Q30KQ1 61 aa15.54■□□□□ 0.08
PTPN12-201ENST00000248594 ZNF841Q6ZN19 808 aa15.54■□□□□ 0.08
PTPN12-201ENST00000248594 MRPL52Q86TS9 123 aaKnown RBP15.54■□□□□ 0.08
PTPN12-201ENST00000248594 ZNF611Q8N823 705 aa15.54■□□□□ 0.08
PTPN12-201ENST00000248594 METTL7AQ9H8H3 244 aa15.54■□□□□ 0.08
PTPN12-201ENST00000248594 ALKBH4Q9NXW9 302 aa15.54■□□□□ 0.08
PTPN12-201ENST00000248594 R4GN57 208 aa15.54■□□□□ 0.08
PTPN12-201ENST00000248594 TRAF3IP2O43734 574 aaPredicted RBP15.54■□□□□ 0.08
PTPN12-201ENST00000248594 MSR1P21757 451 aa15.54■□□□□ 0.08
PTPN12-201ENST00000248594 AGBL5Q8NDL9 886 aa15.54■□□□□ 0.08
PTPN12-201ENST00000248594 SSC4DQ8WTU2 575 aa15.54■□□□□ 0.08
PTPN12-201ENST00000248594 CRIM1Q9NZV1 1036 aa15.54■□□□□ 0.08
PTPN12-201ENST00000248594 CNN3Q15417 329 aaKnown RBP15.53■□□□□ 0.08
PTPN12-201ENST00000248594 PLPPR5Q32ZL2 321 aa15.53■□□□□ 0.08
PTPN12-201ENST00000248594 PHYHD1Q5SRE7 291 aa15.53■□□□□ 0.08
PTPN12-201ENST00000248594 C7orf61Q8IZ16 206 aa15.53■□□□□ 0.08
PTPN12-201ENST00000248594 MRGPRX1Q96LB2 322 aa15.53■□□□□ 0.08
PTPN12-201ENST00000248594 MRPL13Q9BYD1 178 aaKnown RBP15.53■□□□□ 0.08
PTPN12-201ENST00000248594 ATP23Q9Y6H3 246 aa15.53■□□□□ 0.08
PTPN12-201ENST00000248594 DSPP15924 2871 aaKnown RBP15.53■□□□□ 0.08
PTPN12-201ENST00000248594 IGHV5-51A0A0C4DH38 117 aa15.53■□□□□ 0.08
PTPN12-201ENST00000248594 ZNF816Q0VGE8 651 aaPredicted RBP15.53■□□□□ 0.08
PTPN12-201ENST00000248594 SLC22A18ASQ8N1D0 253 aa15.53■□□□□ 0.08
PTPN12-201ENST00000248594 OR2Y1Q8NGV0 311 aa15.53■□□□□ 0.08
PTPN12-201ENST00000248594 SPTSSAQ969W0 71 aa15.53■□□□□ 0.08
PTPN12-201ENST00000248594 MCRIP2Q9BUT9 160 aaKnown RBP15.53■□□□□ 0.08
PTPN12-201ENST00000248594 CACNA1GO43497 2377 aa15.53■□□□□ 0.08
PTPN12-201ENST00000248594 IGLV3-21P80748 117 aaPredicted RBP15.53■□□□□ 0.08
PTPN12-201ENST00000248594 CFAP161Q6P656 301 aa15.53■□□□□ 0.08
PTPN12-201ENST00000248594 ABHD3Q8WU67 409 aa15.53■□□□□ 0.08
PTPN12-201ENST00000248594 ZNF488Q96MN9 340 aa15.53■□□□□ 0.08
PTPN12-201ENST00000248594 PSMG3Q9BT73 122 aaPredicted RBP15.53■□□□□ 0.08
PTPN12-201ENST00000248594 HSPB7Q9UBY9 170 aa15.53■□□□□ 0.08
PTPN12-201ENST00000248594 ADAMTS9Q9P2N4 1935 aa15.52■□□□□ 0.08
PTPN12-201ENST00000248594 A0A1W2PQF6 199 aa15.52■□□□□ 0.08
PTPN12-201ENST00000248594 RNF212BA8MTL3 300 aa15.52■□□□□ 0.08
PTPN12-201ENST00000248594 TNFP01375 233 aa15.52■□□□□ 0.08
PTPN12-201ENST00000248594 NIT1Q86X76 327 aa15.52■□□□□ 0.08
PTPN12-201ENST00000248594 STPG3Q8N7X2 389 aa15.52■□□□□ 0.08
PTPN12-201ENST00000248594 CEP250Q9BV73 2442 aa15.52■□□□□ 0.08
PTPN12-201ENST00000248594 HNRNPA1P09651 372 aaKnown RBP eCLIP15.52■□□□□ 0.07
PTPN12-201ENST00000248594 ZNF808Q8N4W9 903 aaPredicted RBP15.52■□□□□ 0.07
PTPN12-201ENST00000248594 TRBV20OR9-2A0A075B6H5 130 aa15.52■□□□□ 0.07
PTPN12-201ENST00000248594 K7ERU9 68 aa15.52■□□□□ 0.07
PTPN12-201ENST00000248594 IL23AQ9NPF7 189 aa15.52■□□□□ 0.07
PTPN12-201ENST00000248594 SLC25A47Q6Q0C1 308 aa15.51■□□□□ 0.07
PTPN12-201ENST00000248594 OR1L1Q8NH94 360 aa15.51■□□□□ 0.07
PTPN12-201ENST00000248594 DEPPQ9NTK1 212 aa15.51■□□□□ 0.07
PTPN12-201ENST00000248594 LTBP2Q14767 1821 aa15.51■□□□□ 0.07
PTPN12-201ENST00000248594 HSBP1O75506 76 aa15.51■□□□□ 0.07
PTPN12-201ENST00000248594 IGHV3-9P01782 118 aa15.51■□□□□ 0.07
PTPN12-201ENST00000248594 CCL1P22362 96 aa15.51■□□□□ 0.07
PTPN12-201ENST00000248594 C9orf135Q5VTT2 229 aa15.51■□□□□ 0.07
PTPN12-201ENST00000248594 Q6ZS52 159 aa15.51■□□□□ 0.07
PTPN12-201ENST00000248594 ZDHHC16Q969W1 377 aa15.51■□□□□ 0.07
PTPN12-201ENST00000248594 CLEC7AQ9BXN2 247 aa15.51■□□□□ 0.07
PTPN12-201ENST00000248594 GNG7O60262 68 aa15.5■□□□□ 0.07
PTPN12-201ENST00000248594 BCL3P20749 454 aa15.5■□□□□ 0.07
PTPN12-201ENST00000248594 KIR2DL1P43626 348 aaPredicted RBP15.5■□□□□ 0.07
PTPN12-201ENST00000248594 PPOXP50336 477 aa15.5■□□□□ 0.07
PTPN12-201ENST00000248594 ZNF83P51522 516 aa15.5■□□□□ 0.07
PTPN12-201ENST00000248594 RNASEKQ6P5S7 137 aaKnown RBP15.5■□□□□ 0.07
PTPN12-201ENST00000248594 ULBP2Q9BZM5 246 aa15.5■□□□□ 0.07
PTPN12-201ENST00000248594 GCM1Q9NP62 436 aa15.5■□□□□ 0.07
PTPN12-201ENST00000248594 OR1A1Q9P1Q5 309 aa15.5■□□□□ 0.07
PTPN12-201ENST00000248594 CLDN14O95500 239 aa15.5■□□□□ 0.07
PTPN12-201ENST00000248594 IGKV3-11P04433 115 aa15.5■□□□□ 0.07
PTPN12-201ENST00000248594 RBM11P57052 281 aaKnown RBP15.5■□□□□ 0.07
PTPN12-201ENST00000248594 C17orf67Q0P5P2 114 aa15.5■□□□□ 0.07
PTPN12-201ENST00000248594 IGFBP7Q16270 282 aa15.5■□□□□ 0.07
PTPN12-201ENST00000248594 TMEM144Q7Z5S9 345 aa15.5■□□□□ 0.07
PTPN12-201ENST00000248594 LMX1AQ8TE12 382 aa15.5■□□□□ 0.07
PTPN12-201ENST00000248594 A0A1W2PS18 150 aa15.5■□□□□ 0.07
PTPN12-201ENST00000248594 FAM166BA8MTA8 275 aa15.5■□□□□ 0.07
PTPN12-201ENST00000248594 VENTXO95231 258 aa15.49■□□□□ 0.07
PTPN12-201ENST00000248594 UQCRFS1P47985 274 aa15.49■□□□□ 0.07
PTPN12-201ENST00000248594 ACSF3Q4G176 576 aaPredicted RBP15.49■□□□□ 0.07
PTPN12-201ENST00000248594 TMEM240Q5SV17 173 aa15.49■□□□□ 0.07
PTPN12-201ENST00000248594 DOLPP1Q86YN1 238 aa15.49■□□□□ 0.07
PTPN12-201ENST00000248594 MMD2Q8IY49 270 aa15.49■□□□□ 0.07
PTPN12-201ENST00000248594 OR10P1Q8NGE3 313 aa15.49■□□□□ 0.07
PTPN12-201ENST00000248594 UCN2Q96RP3 112 aa15.49■□□□□ 0.07
PTPN12-201ENST00000248594 QTRT1Q9BXR0 403 aaKnown RBP15.49■□□□□ 0.07
PTPN12-201ENST00000248594 MUC21A0A0G2JKD1 596 aa15.49■□□□□ 0.07
PTPN12-201ENST00000248594 MUC21A0A140T8X8 626 aa15.49■□□□□ 0.07
PTPN12-201ENST00000248594 NPIPA3F8WFD2 350 aa15.49■□□□□ 0.07
PTPN12-201ENST00000248594 PMCHL1Q16048 86 aa15.49■□□□□ 0.07
PTPN12-201ENST00000248594 RSPO1Q2MKA7 263 aaPredicted RBP15.49■□□□□ 0.07
PTPN12-201ENST00000248594 MUC21Q5SSG8 566 aa15.49■□□□□ 0.07
PTPN12-201ENST00000248594 GAGE12BA1L429 117 aa15.49■□□□□ 0.07
PTPN12-201ENST00000248594 SYNGR4O95473 234 aa15.49■□□□□ 0.07
PTPN12-201ENST00000248594 B4GALT1P15291 398 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms