RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 RHBDL2Q9NX52 303 aa16.52■□□□□ 0.24
HCFC1R1-201ENST00000248089 FCN1O00602 326 aa16.51■□□□□ 0.23
HCFC1R1-201ENST00000248089 PPIFP30405 207 aaKnown RBP16.51■□□□□ 0.23
HCFC1R1-201ENST00000248089 CX3CL1P78423 397 aa16.51■□□□□ 0.23
HCFC1R1-201ENST00000248089 PSG5Q15238 335 aa16.51■□□□□ 0.23
HCFC1R1-201ENST00000248089 Q6ZS49 121 aa16.51■□□□□ 0.23
HCFC1R1-201ENST00000248089 C4orf3Q8WVX3 66 aa16.51■□□□□ 0.23
HCFC1R1-201ENST00000248089 DPF1Q92782 380 aa16.51■□□□□ 0.23
HCFC1R1-201ENST00000248089 RNF5Q99942 180 aa16.51■□□□□ 0.23
HCFC1R1-201ENST00000248089 GPR61Q9BZJ8 451 aa16.51■□□□□ 0.23
HCFC1R1-201ENST00000248089 KLK15Q9H2R5 256 aa16.51■□□□□ 0.23
HCFC1R1-201ENST00000248089 A0A1W2PN81 502 aa16.5■□□□□ 0.23
HCFC1R1-201ENST00000248089 CHRNA7P36544 502 aa16.5■□□□□ 0.23
HCFC1R1-201ENST00000248089 SRSF7Q16629 238 aaKnown RBP eCLIP16.5■□□□□ 0.23
HCFC1R1-201ENST00000248089 ZNF660Q6AZW8 331 aaPredicted RBP16.5■□□□□ 0.23
HCFC1R1-201ENST00000248089 OR5H6Q8NGV6 325 aa16.5■□□□□ 0.23
HCFC1R1-201ENST00000248089 FLYWCH2Q96CP2 140 aaKnown RBP16.5■□□□□ 0.23
HCFC1R1-201ENST00000248089 C5orf30Q96GV9 206 aa16.5■□□□□ 0.23
HCFC1R1-201ENST00000248089 VCX3AQ9NNX9 186 aa16.5■□□□□ 0.23
HCFC1R1-201ENST00000248089 GAB2Q9UQC2 676 aa16.5■□□□□ 0.23
HCFC1R1-201ENST00000248089 ETV7Q9Y603 341 aa16.5■□□□□ 0.23
HCFC1R1-201ENST00000248089 J3QRK9 145 aa16.49■□□□□ 0.23
HCFC1R1-201ENST00000248089 SLC25A17O43808 307 aa16.49■□□□□ 0.23
HCFC1R1-201ENST00000248089 SPDEFO95238 335 aa16.49■□□□□ 0.23
HCFC1R1-201ENST00000248089 CA2P00918 260 aa16.49■□□□□ 0.23
HCFC1R1-201ENST00000248089 PITPNAQ00169 270 aa16.49■□□□□ 0.23
HCFC1R1-201ENST00000248089 CBX3Q13185 183 aa16.49■□□□□ 0.23
HCFC1R1-201ENST00000248089 H1FOOQ8IZA3 346 aaPredicted RBP16.49■□□□□ 0.23
HCFC1R1-201ENST00000248089 TSPAN14Q8NG11 270 aa16.49■□□□□ 0.23
HCFC1R1-201ENST00000248089 SLC25A38Q96DW6 304 aa16.49■□□□□ 0.23
HCFC1R1-201ENST00000248089 OR5B12Q96R08 314 aa16.49■□□□□ 0.23
HCFC1R1-201ENST00000248089 FAM103A1Q9BTL3 118 aaKnown RBP16.49■□□□□ 0.23
HCFC1R1-201ENST00000248089 MCRIP2Q9BUT9 160 aaKnown RBP16.49■□□□□ 0.23
HCFC1R1-201ENST00000248089 GNB4Q9HAV0 340 aa16.49■□□□□ 0.23
HCFC1R1-201ENST00000248089 TPSG1Q9NRR2 321 aa16.49■□□□□ 0.23
HCFC1R1-201ENST00000248089 TNFAIP8O95379 198 aa16.48■□□□□ 0.23
HCFC1R1-201ENST00000248089 IGLV1-40P01703 118 aa16.48■□□□□ 0.23
HCFC1R1-201ENST00000248089 KRTAP10-11P60412 298 aa16.48■□□□□ 0.23
HCFC1R1-201ENST00000248089 TIMM50Q3ZCQ8 353 aa16.48■□□□□ 0.23
HCFC1R1-201ENST00000248089 ZNF260Q3ZCT1 412 aa16.48■□□□□ 0.23
HCFC1R1-201ENST00000248089 MYOZ3Q8TDC0 251 aa16.48■□□□□ 0.23
HCFC1R1-201ENST00000248089 CASTOR1Q8WTX7 329 aa16.48■□□□□ 0.23
HCFC1R1-201ENST00000248089 FOXA2Q9Y261 457 aaPredicted RBP16.48■□□□□ 0.23
HCFC1R1-201ENST00000248089 A0A087WXM4 84 aa16.47■□□□□ 0.23
HCFC1R1-201ENST00000248089 TGFBR1P36897 503 aa16.47■□□□□ 0.23
HCFC1R1-201ENST00000248089 SCAND1P57086 179 aa16.47■□□□□ 0.23
HCFC1R1-201ENST00000248089 RTL8BQ17RB0 113 aa16.47■□□□□ 0.23
HCFC1R1-201ENST00000248089 PPP1R27Q86WC6 154 aa16.47■□□□□ 0.23
HCFC1R1-201ENST00000248089 MINDY2Q8NBR6 621 aa16.47■□□□□ 0.23
HCFC1R1-201ENST00000248089 BVESQ8NE79 360 aa16.47■□□□□ 0.23
HCFC1R1-201ENST00000248089 OR5M8Q8NGP6 311 aa16.47■□□□□ 0.23
HCFC1R1-201ENST00000248089 GRPEL2Q8TAA5 225 aa16.47■□□□□ 0.23
HCFC1R1-201ENST00000248089 HARBI1Q96MB7 349 aa16.47■□□□□ 0.23
HCFC1R1-201ENST00000248089 DCSTAMPQ9H295 470 aa16.47■□□□□ 0.23
HCFC1R1-201ENST00000248089 VSIG4Q9Y279 399 aa16.47■□□□□ 0.23
HCFC1R1-201ENST00000248089 TRAV18A0A075B6X5 111 aa16.46■□□□□ 0.23
HCFC1R1-201ENST00000248089 AIREO43918 545 aa16.46■□□□□ 0.23
HCFC1R1-201ENST00000248089 SSX5O60225 188 aa16.46■□□□□ 0.23
HCFC1R1-201ENST00000248089 EGR2P11161 476 aaPredicted RBP16.46■□□□□ 0.23
HCFC1R1-201ENST00000248089 NFYAP23511 347 aaPredicted RBP16.46■□□□□ 0.23
HCFC1R1-201ENST00000248089 RAB9AP51151 201 aa16.46■□□□□ 0.23
HCFC1R1-201ENST00000248089 CRIP2P52943 208 aaPredicted RBP16.46■□□□□ 0.23
HCFC1R1-201ENST00000248089 GNB1P62873 340 aa16.46■□□□□ 0.23
HCFC1R1-201ENST00000248089 TMEM267Q0VDI3 215 aaPredicted RBP16.46■□□□□ 0.23
HCFC1R1-201ENST00000248089 C19orf54Q5BKX5 351 aa16.46■□□□□ 0.23
HCFC1R1-201ENST00000248089 UNQ5815/PRO19632Q6UWF5 114 aa16.46■□□□□ 0.23
HCFC1R1-201ENST00000248089 ZNF491Q8N8L2 437 aa16.46■□□□□ 0.23
HCFC1R1-201ENST00000248089 OR11H1Q8NG94 326 aa16.46■□□□□ 0.23
HCFC1R1-201ENST00000248089 ARPC1AQ92747 370 aa16.46■□□□□ 0.23
HCFC1R1-201ENST00000248089 UBE2E2Q96LR5 201 aa16.46■□□□□ 0.23
HCFC1R1-201ENST00000248089 SHOXO15266 292 aa16.45■□□□□ 0.22
HCFC1R1-201ENST00000248089 SOX15O60248 233 aa16.45■□□□□ 0.22
HCFC1R1-201ENST00000248089 LSM3P62310 102 aaKnown RBP16.45■□□□□ 0.22
HCFC1R1-201ENST00000248089 ACTBL2Q562R1 376 aa16.45■□□□□ 0.22
HCFC1R1-201ENST00000248089 TCTEX1D1Q8N7M0 179 aa16.45■□□□□ 0.22
HCFC1R1-201ENST00000248089 CNIH1O95406 144 aa16.44■□□□□ 0.22
HCFC1R1-201ENST00000248089 IGLV2-23P01705 113 aa16.44■□□□□ 0.22
HCFC1R1-201ENST00000248089 CTXN2P0C2S0 81 aa16.44■□□□□ 0.22
HCFC1R1-201ENST00000248089 LUMP51884 338 aaPredicted RBP16.44■□□□□ 0.22
HCFC1R1-201ENST00000248089 TAGLNQ01995 201 aaKnown RBP16.44■□□□□ 0.22
HCFC1R1-201ENST00000248089 EGFEM1PQ0D2K5 195 aa16.44■□□□□ 0.22
HCFC1R1-201ENST00000248089 KIAA0141Q14154 515 aaPredicted RBP16.44■□□□□ 0.22
HCFC1R1-201ENST00000248089 FXYD3Q14802 87 aa16.44■□□□□ 0.22
HCFC1R1-201ENST00000248089 CNIH2Q6PI25 160 aa16.44■□□□□ 0.22
HCFC1R1-201ENST00000248089 ZNF562Q6V9R5 426 aa16.44■□□□□ 0.22
HCFC1R1-201ENST00000248089 ZNF645Q8N7E2 425 aa16.44■□□□□ 0.22
HCFC1R1-201ENST00000248089 LFNGQ8NES3 379 aa16.44■□□□□ 0.22
HCFC1R1-201ENST00000248089 YIPF6Q96EC8 236 aa16.44■□□□□ 0.22
HCFC1R1-201ENST00000248089 ADTRPQ96IZ2 230 aa16.44■□□□□ 0.22
HCFC1R1-201ENST00000248089 ANXA10Q9UJ72 324 aa16.44■□□□□ 0.22
HCFC1R1-201ENST00000248089 OR2W1Q9Y3N9 320 aa16.44■□□□□ 0.22
HCFC1R1-201ENST00000248089 NUBP2Q9Y5Y2 271 aa16.44■□□□□ 0.22
HCFC1R1-201ENST00000248089 K7EIL1 84 aa16.43■□□□□ 0.22
HCFC1R1-201ENST00000248089 CRYZL1O95825 349 aa16.43■□□□□ 0.22
HCFC1R1-201ENST00000248089 DUTP33316 252 aaKnown RBP16.43■□□□□ 0.22
HCFC1R1-201ENST00000248089 LGALS7P47929 136 aa16.43■□□□□ 0.22
HCFC1R1-201ENST00000248089 ARPC4P59998 168 aa16.43■□□□□ 0.22
HCFC1R1-201ENST00000248089 FHL3Q13643 280 aa16.43■□□□□ 0.22
HCFC1R1-201ENST00000248089 TMEM177Q53S58 311 aa16.43■□□□□ 0.22
HCFC1R1-201ENST00000248089 MS4A10Q96PG2 267 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms