RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 AQP10Q96PS8 301 aa7.2□□□□□ -1.26
VPS4B-201ENST00000238497 RSRP1Q9BUV0 290 aa7.2□□□□□ -1.26
VPS4B-201ENST00000238497 FAM212BQ9NTI7 297 aaPredicted RBP7.2□□□□□ -1.26
VPS4B-201ENST00000238497 LPAR3Q9UBY5 353 aa7.2□□□□□ -1.26
VPS4B-201ENST00000238497 TMEM30CPA0ZSE6 113 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 IGSF23A1L1A6 192 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 IFNA17P01571 189 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 FGF2P09038 288 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 MUC1P15941 1255 aaPredicted RBP7.19□□□□□ -1.26
VPS4B-201ENST00000238497 VDAC1P21796 283 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 PRDX2P32119 198 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 PDLIM4P50479 330 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 KLF3P57682 345 aaPredicted RBP7.19□□□□□ -1.26
VPS4B-201ENST00000238497 Q6ZRM9 215 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 DMBX1Q8NFW5 382 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 PUS1Q9Y606 427 aaKnown RBP eCLIP7.19□□□□□ -1.26
VPS4B-201ENST00000238497 TNCP24821 2201 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 CEACAM18A8MTB9 384 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 IGLV1-44P01699 117 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 PGA5P0DJD9 388 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 RPS23P62266 143 aaKnown RBP7.19□□□□□ -1.26
VPS4B-201ENST00000238497 MSMPQ1L6U9 139 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 SMIM21Q3B7S5 101 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 Q6P435 159 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 DUX4L9Q6RFH8 374 aaPredicted RBP7.19□□□□□ -1.26
VPS4B-201ENST00000238497 LCN15Q6UWW0 184 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 WDR82Q6UXN9 313 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 Q6ZSR3 168 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 ZFP82Q8N141 532 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 DRAM1Q8N682 238 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 GALNT14Q96FL9 552 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 NRIP2Q9BQI9 281 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 RIMS4Q9H426 269 aaPredicted RBP7.19□□□□□ -1.26
VPS4B-201ENST00000238497 PLEKHA2Q9HB19 425 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 RPS10P5Q9NQ39 176 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 MALRD1Q5VYJ5 2156 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 CEBPZOSA8MTT3 80 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 GPR137BO60478 399 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 FCGR3BO75015 233 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 EGR1P18146 543 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 FGF8P55075 233 aaPredicted RBP7.19□□□□□ -1.26
VPS4B-201ENST00000238497 OR2B8PP59922 312 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 C11orf71Q6IPW1 123 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 HSD17B13Q7Z5P4 300 aaPredicted RBP7.19□□□□□ -1.26
VPS4B-201ENST00000238497 STX12Q86Y82 276 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 FGFRL1Q8N441 504 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 TMEM252Q8N6L7 170 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 OR4A4PQ8NGN8 299 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 SCGB1C1Q8TD33 95 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 IGFBPL1Q8WX77 278 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 H1FXQ92522 213 aaKnown RBP7.19□□□□□ -1.26
VPS4B-201ENST00000238497 CCL13Q99616 98 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 PIMREGQ9BSJ6 248 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 RSG1Q9BU20 258 aa7.19□□□□□ -1.26
VPS4B-201ENST00000238497 MRPL37Q9BZE1 423 aaKnown RBP7.19□□□□□ -1.26
VPS4B-201ENST00000238497 NKX6-2Q9C056 277 aaPredicted RBP7.19□□□□□ -1.26
VPS4B-201ENST00000238497 CHD3Q12873 2000 aaKnown RBP7.18□□□□□ -1.26
VPS4B-201ENST00000238497 TMEM218A2RU14 115 aa7.18□□□□□ -1.26
VPS4B-201ENST00000238497 RNASEK-C17orf49H0YIS7 233 aa7.18□□□□□ -1.26
VPS4B-201ENST00000238497 SHOXO15266 292 aa7.18□□□□□ -1.26
VPS4B-201ENST00000238497 RPL23AP62750 156 aaKnown RBP7.18□□□□□ -1.26
VPS4B-201ENST00000238497 AKR1C8PQ5T2L2 129 aa7.18□□□□□ -1.26
VPS4B-201ENST00000238497 GPR157Q5UAW9 335 aa7.18□□□□□ -1.26
VPS4B-201ENST00000238497 SAXO1Q8IYX7 474 aa7.18□□□□□ -1.26
VPS4B-201ENST00000238497 PKIBQ9C010 78 aa7.18□□□□□ -1.26
VPS4B-201ENST00000238497 PSENENQ9NZ42 101 aa7.18□□□□□ -1.26
VPS4B-201ENST00000238497 CLN8Q9UBY8 286 aa7.18□□□□□ -1.26
VPS4B-201ENST00000238497 A8MXK9 166 aa7.18□□□□□ -1.26
VPS4B-201ENST00000238497 IQCF6A8MYZ5 107 aa7.18□□□□□ -1.26
VPS4B-201ENST00000238497 TMPRSS2O15393 492 aa7.18□□□□□ -1.26
VPS4B-201ENST00000238497 SPINT2O43291 252 aa7.18□□□□□ -1.26
VPS4B-201ENST00000238497 TMEM50AO95807 157 aa7.18□□□□□ -1.26
VPS4B-201ENST00000238497 IFNA5P01569 189 aa7.18□□□□□ -1.26
VPS4B-201ENST00000238497 GYPAP02724 150 aa7.18□□□□□ -1.26
VPS4B-201ENST00000238497 FBP1P09467 338 aa7.18□□□□□ -1.26
VPS4B-201ENST00000238497 ATP6V0CP27449 155 aa7.18□□□□□ -1.26
VPS4B-201ENST00000238497 TNFAIP6P98066 277 aaPredicted RBP7.18□□□□□ -1.26
VPS4B-201ENST00000238497 MST1LQ2TV78 715 aa7.18□□□□□ -1.26
VPS4B-201ENST00000238497 ACP7Q6ZNF0 438 aa7.18□□□□□ -1.26
VPS4B-201ENST00000238497 Q8IYB0 196 aa7.18□□□□□ -1.26
VPS4B-201ENST00000238497 PUSL1Q8N0Z8 303 aaKnown RBP7.18□□□□□ -1.26
VPS4B-201ENST00000238497 SDSLQ96GA7 329 aa7.18□□□□□ -1.26
VPS4B-201ENST00000238497 ZDHHC8Q9ULC8 765 aa7.18□□□□□ -1.26
VPS4B-201ENST00000238497 PLXNB1O43157 2135 aa7.18□□□□□ -1.26
VPS4B-201ENST00000238497 ZFP92A6NM28 416 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 M0R1X1 148 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 SFTA3P0C7M3 94 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 USF1P22415 310 aaPredicted RBP7.17□□□□□ -1.26
VPS4B-201ENST00000238497 GLRXP35754 106 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 PJVKQ0ZLH3 352 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 IL13RA2Q14627 380 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 OR5T1Q8NG75 326 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 PHYHIPLQ96FC7 376 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 BPESC1Q9GZL8 116 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 LPAR2Q9HBW0 351 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 UQCC1Q9NVA1 299 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 POMT1Q9Y6A1 747 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 TRBV6-7A0A0A0MS04 114 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 TAAR5O14804 337 aa7.17□□□□□ -1.26
VPS4B-201ENST00000238497 CDS2O95674 445 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms