RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 LY6G5BQ8NDX9 201 aa12.45□□□□□ -0.42
HDHD3-201ENST00000238379 ZNF680Q8NEM1 530 aa12.45□□□□□ -0.42
HDHD3-201ENST00000238379 DMBX1Q8NFW5 382 aa12.45□□□□□ -0.42
HDHD3-201ENST00000238379 RNASE11Q8TAA1 199 aaKnown RBP12.45□□□□□ -0.42
HDHD3-201ENST00000238379 ZNF596Q8TC21 504 aa12.45□□□□□ -0.42
HDHD3-201ENST00000238379 NARFLQ9H6Q4 476 aa12.45□□□□□ -0.42
HDHD3-201ENST00000238379 RCL1Q9Y2P8 373 aaKnown RBP12.45□□□□□ -0.42
HDHD3-201ENST00000238379 MMP24Q9Y5R2 645 aa12.45□□□□□ -0.42
HDHD3-201ENST00000238379 KIAA1324LA8MWY0 1029 aaPredicted RBP12.44□□□□□ -0.42
HDHD3-201ENST00000238379 RBFOX2O43251 390 aaKnown RBP eCLIP12.44□□□□□ -0.42
HDHD3-201ENST00000238379 CFDP00746 253 aaPredicted RBP12.44□□□□□ -0.42
HDHD3-201ENST00000238379 KRASP01116 189 aa12.44□□□□□ -0.42
HDHD3-201ENST00000238379 C11orf1Q9H5F2 150 aa12.44□□□□□ -0.42
HDHD3-201ENST00000238379 CACNG5Q9UF02 275 aa12.44□□□□□ -0.42
HDHD3-201ENST00000238379 C22orf46C9J442 243 aa12.44□□□□□ -0.42
HDHD3-201ENST00000238379 E5RGE8 158 aa12.44□□□□□ -0.42
HDHD3-201ENST00000238379 FCGR3BO75015 233 aa12.44□□□□□ -0.42
HDHD3-201ENST00000238379 IGHV4-39P01824 125 aa12.44□□□□□ -0.42
HDHD3-201ENST00000238379 HKR1P10072 659 aa12.44□□□□□ -0.42
HDHD3-201ENST00000238379 G6PCP35575 357 aa12.44□□□□□ -0.42
HDHD3-201ENST00000238379 POLR2GP62487 172 aaKnown RBP eCLIP12.44□□□□□ -0.42
HDHD3-201ENST00000238379 GNB2P62879 340 aa12.44□□□□□ -0.42
HDHD3-201ENST00000238379 SP5Q6BEB4 398 aaPredicted RBP12.44□□□□□ -0.42
HDHD3-201ENST00000238379 ZNF767PQ75MW2 155 aa12.44□□□□□ -0.42
HDHD3-201ENST00000238379 LINC00311Q8N616 119 aa12.44□□□□□ -0.42
HDHD3-201ENST00000238379 ZNF525Q8N782 197 aa12.44□□□□□ -0.42
HDHD3-201ENST00000238379 PLEKHA2Q9HB19 425 aa12.44□□□□□ -0.42
HDHD3-201ENST00000238379 NSG2Q9Y328 171 aa12.44□□□□□ -0.42
HDHD3-201ENST00000238379 PRELID3BQ9Y3B1 194 aa12.44□□□□□ -0.42
HDHD3-201ENST00000238379 A0A1W2PPH5 198 aa12.43□□□□□ -0.42
HDHD3-201ENST00000238379 J3QR06 171 aa12.43□□□□□ -0.42
HDHD3-201ENST00000238379 BCL2L11O43521 198 aa12.43□□□□□ -0.42
HDHD3-201ENST00000238379 ATG12O94817 140 aa12.43□□□□□ -0.42
HDHD3-201ENST00000238379 RBP4P02753 201 aa12.43□□□□□ -0.42
HDHD3-201ENST00000238379 NUP62P37198 522 aaPredicted RBP12.43□□□□□ -0.42
HDHD3-201ENST00000238379 THBS3P49746 956 aa12.43□□□□□ -0.42
HDHD3-201ENST00000238379 ZNF833PQ6ZTB9 187 aa12.43□□□□□ -0.42
HDHD3-201ENST00000238379 ZNF383Q8NA42 475 aa12.43□□□□□ -0.42
HDHD3-201ENST00000238379 S1PR3Q99500 378 aa12.43□□□□□ -0.42
HDHD3-201ENST00000238379 CCL19Q99731 98 aa12.43□□□□□ -0.42
HDHD3-201ENST00000238379 SSBP3Q9BWW4 388 aaPredicted RBP12.43□□□□□ -0.42
HDHD3-201ENST00000238379 TMEM133Q9H2Q1 129 aa12.43□□□□□ -0.42
HDHD3-201ENST00000238379 SESN1Q9Y6P5 492 aa12.43□□□□□ -0.42
HDHD3-201ENST00000238379 KANTRA0A1W2PQU2 76 aa12.42□□□□□ -0.42
HDHD3-201ENST00000238379 A1L4Q6 167 aa12.42□□□□□ -0.42
HDHD3-201ENST00000238379 HPRT1P00492 218 aa12.42□□□□□ -0.42
HDHD3-201ENST00000238379 LIPFP07098 398 aa12.42□□□□□ -0.42
HDHD3-201ENST00000238379 RPL12P30050 165 aaKnown RBP12.42□□□□□ -0.42
HDHD3-201ENST00000238379 KIR2DS2P43631 304 aa12.42□□□□□ -0.42
HDHD3-201ENST00000238379 SLC51BQ86UW2 128 aa12.42□□□□□ -0.42
HDHD3-201ENST00000238379 ABHD12Q8N2K0 398 aa12.42□□□□□ -0.42
HDHD3-201ENST00000238379 OR9G1Q8NH87 305 aa12.42□□□□□ -0.42
HDHD3-201ENST00000238379 ADTRPQ96IZ2 230 aa12.42□□□□□ -0.42
HDHD3-201ENST00000238379 MAGT1Q9H0U3 335 aa12.42□□□□□ -0.42
HDHD3-201ENST00000238379 COA4Q9NYJ1 87 aa12.42□□□□□ -0.42
HDHD3-201ENST00000238379 NXPH3O95157 252 aa12.41□□□□□ -0.42
HDHD3-201ENST00000238379 CT45A6P0DMU7 189 aa12.41□□□□□ -0.42
HDHD3-201ENST00000238379 CT45A5P0DMU8 189 aa12.41□□□□□ -0.42
HDHD3-201ENST00000238379 CT45A7P0DMV0 189 aa12.41□□□□□ -0.42
HDHD3-201ENST00000238379 COX6B1P14854 86 aa12.41□□□□□ -0.42
HDHD3-201ENST00000238379 P2RY1P47900 373 aa12.41□□□□□ -0.42
HDHD3-201ENST00000238379 EXOSC2Q13868 293 aaKnown RBP12.41□□□□□ -0.42
HDHD3-201ENST00000238379 TACC2O95359 2948 aa12.41□□□□□ -0.42
HDHD3-201ENST00000238379 LOC105371242A0A075B767 164 aa12.41□□□□□ -0.42
HDHD3-201ENST00000238379 MARCH11A6NNE9 402 aa12.41□□□□□ -0.42
HDHD3-201ENST00000238379 MIDNQ504T8 468 aa12.41□□□□□ -0.42
HDHD3-201ENST00000238379 ST6GALNAC6Q969X2 333 aa12.41□□□□□ -0.42
HDHD3-201ENST00000238379 R3HDM4Q96D70 268 aa12.41□□□□□ -0.42
HDHD3-201ENST00000238379 ARPC5LQ9BPX5 153 aa12.41□□□□□ -0.42
HDHD3-201ENST00000238379 BPESC1Q9GZL8 116 aa12.41□□□□□ -0.42
HDHD3-201ENST00000238379 SPG11Q96JI7 2443 aa12.4□□□□□ -0.42
HDHD3-201ENST00000238379 SSSCA1O60232 199 aa12.4□□□□□ -0.42
HDHD3-201ENST00000238379 TMEM50AO95807 157 aa12.4□□□□□ -0.42
HDHD3-201ENST00000238379 IFNA7P01567 189 aa12.4□□□□□ -0.42
HDHD3-201ENST00000238379 IGHV2-5P01817 119 aa12.4□□□□□ -0.42
HDHD3-201ENST00000238379 ZNF137PP52743 207 aa12.4□□□□□ -0.42
HDHD3-201ENST00000238379 ZNF295-AS1Q8N0V1 137 aa12.4□□□□□ -0.42
HDHD3-201ENST00000238379 OR10X1Q8NGY0 326 aa12.4□□□□□ -0.42
HDHD3-201ENST00000238379 OR4S2Q8NH73 311 aa12.4□□□□□ -0.42
HDHD3-201ENST00000238379 IGHV2-26A0A0B4J1V2 119 aa12.39□□□□□ -0.43
HDHD3-201ENST00000238379 CHST1O43916 411 aa12.39□□□□□ -0.43
HDHD3-201ENST00000238379 MMP9P14780 707 aa12.39□□□□□ -0.43
HDHD3-201ENST00000238379 PVALBP20472 110 aaPredicted RBP12.39□□□□□ -0.43
HDHD3-201ENST00000238379 DLX1P56177 255 aa12.39□□□□□ -0.43
HDHD3-201ENST00000238379 GPR157Q5UAW9 335 aa12.39□□□□□ -0.43
HDHD3-201ENST00000238379 H2BFWTQ7Z2G1 175 aa12.39□□□□□ -0.43
HDHD3-201ENST00000238379 Q8N7P7 452 aa12.39□□□□□ -0.43
HDHD3-201ENST00000238379 TNFRSF14Q92956 283 aa12.39□□□□□ -0.43
HDHD3-201ENST00000238379 TMEM186Q96B77 213 aa12.39□□□□□ -0.43
HDHD3-201ENST00000238379 CYTL1Q9NRR1 136 aa12.39□□□□□ -0.43
HDHD3-201ENST00000238379 hCG_1809904A0A1W2PP81 198 aa12.39□□□□□ -0.43
HDHD3-201ENST00000238379 A0A1W2PPE2 198 aa12.39□□□□□ -0.43
HDHD3-201ENST00000238379 A0A1W2PR64 198 aa12.39□□□□□ -0.43
HDHD3-201ENST00000238379 A0A1W2PRV1 198 aa12.39□□□□□ -0.43
HDHD3-201ENST00000238379 TOR1AO14656 332 aa12.39□□□□□ -0.43
HDHD3-201ENST00000238379 SPDEFO95238 335 aa12.39□□□□□ -0.43
HDHD3-201ENST00000238379 IGLV1-47P01700 117 aa12.39□□□□□ -0.43
HDHD3-201ENST00000238379 ZFP36P26651 326 aaKnown RBP12.39□□□□□ -0.43
HDHD3-201ENST00000238379 PDLIM4P50479 330 aa12.39□□□□□ -0.43
HDHD3-201ENST00000238379 PAX9P55771 341 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms