RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 CCKARP32238 428 aa17.3■□□□□ 0.36
SNX3-201ENST00000230085 SRP14P37108 136 aaKnown RBP17.3■□□□□ 0.36
SNX3-201ENST00000230085 COL10A1Q03692 680 aa17.3■□□□□ 0.36
SNX3-201ENST00000230085 TMEM267Q0VDI3 215 aaPredicted RBP17.3■□□□□ 0.36
SNX3-201ENST00000230085 TMEM249Q2WGJ8 235 aa17.3■□□□□ 0.36
SNX3-201ENST00000230085 BSXQ3C1V8 233 aa17.3■□□□□ 0.36
SNX3-201ENST00000230085 PDZD11Q5EBL8 140 aa17.3■□□□□ 0.36
SNX3-201ENST00000230085 LCN15Q6UWW0 184 aa17.3■□□□□ 0.36
SNX3-201ENST00000230085 CPEB3Q8NE35 698 aaKnown RBP17.3■□□□□ 0.36
SNX3-201ENST00000230085 OR10V1Q8NGI7 309 aa17.3■□□□□ 0.36
SNX3-201ENST00000230085 SMIM7Q9BQ49 75 aa17.3■□□□□ 0.36
SNX3-201ENST00000230085 VSIRQ9H7M9 311 aa17.3■□□□□ 0.36
SNX3-201ENST00000230085 LIN7CQ9NUP9 197 aaKnown RBP17.3■□□□□ 0.36
SNX3-201ENST00000230085 TRGV8A0A0C4DH27 118 aa17.29■□□□□ 0.36
SNX3-201ENST00000230085 CEBPZOSA8MTT3 80 aa17.29■□□□□ 0.36
SNX3-201ENST00000230085 ZNF737O75373 536 aa17.29■□□□□ 0.36
SNX3-201ENST00000230085 HRASP01112 189 aa17.29■□□□□ 0.36
SNX3-201ENST00000230085 HLA-HP01893 362 aa17.29■□□□□ 0.36
SNX3-201ENST00000230085 METTL15P1P0C7V9 234 aa17.29■□□□□ 0.36
SNX3-201ENST00000230085 PSG2P11465 335 aa17.29■□□□□ 0.36
SNX3-201ENST00000230085 LCN2P80188 198 aa17.29■□□□□ 0.36
SNX3-201ENST00000230085 ACTL10Q5JWF8 245 aa17.29■□□□□ 0.36
SNX3-201ENST00000230085 C16orf82Q7Z2V1 217 aa17.29■□□□□ 0.36
SNX3-201ENST00000230085 OR10D3Q8NH80 312 aa17.29■□□□□ 0.36
SNX3-201ENST00000230085 APOBEC3DQ96AK3 386 aaPredicted RBP17.29■□□□□ 0.36
SNX3-201ENST00000230085 PKIBQ9C010 78 aa17.29■□□□□ 0.36
SNX3-201ENST00000230085 RBKSQ9H477 322 aa17.29■□□□□ 0.36
SNX3-201ENST00000230085 CACNG5Q9UF02 275 aa17.29■□□□□ 0.36
SNX3-201ENST00000230085 OR5B21A6NL26 309 aa17.28■□□□□ 0.36
SNX3-201ENST00000230085 CD300LBA8K4G0 201 aa17.28■□□□□ 0.36
SNX3-201ENST00000230085 AHRRA9YTQ3 701 aa17.28■□□□□ 0.36
SNX3-201ENST00000230085 PPP5D1E7EU14 171 aa17.28■□□□□ 0.36
SNX3-201ENST00000230085 IGKV1-5P01602 117 aa17.28■□□□□ 0.36
SNX3-201ENST00000230085 IGLV2-14P01704 120 aa17.28■□□□□ 0.36
SNX3-201ENST00000230085 PATE4P0C8F1 98 aa17.28■□□□□ 0.36
SNX3-201ENST00000230085 SELLP14151 372 aa17.28■□□□□ 0.36
SNX3-201ENST00000230085 CD99P14209 185 aa17.28■□□□□ 0.36
SNX3-201ENST00000230085 PRSS12P56730 875 aa17.28■□□□□ 0.36
SNX3-201ENST00000230085 RPL23P62829 140 aaKnown RBP17.28■□□□□ 0.36
SNX3-201ENST00000230085 RPRMLQ8N4K4 120 aa17.28■□□□□ 0.36
SNX3-201ENST00000230085 CTXND1A0A1B0GTU2 59 aa17.28■□□□□ 0.36
SNX3-201ENST00000230085 OR5B12Q96R08 314 aa17.28■□□□□ 0.36
SNX3-201ENST00000230085 OR4C12Q96R67 309 aa17.28■□□□□ 0.36
SNX3-201ENST00000230085 IMMP2LQ96T52 175 aa17.28■□□□□ 0.36
SNX3-201ENST00000230085 H7BYZ3 331 aa17.27■□□□□ 0.35
SNX3-201ENST00000230085 CXCL13O43927 109 aa17.27■□□□□ 0.35
SNX3-201ENST00000230085 WDR1O75083 606 aa17.27■□□□□ 0.35
SNX3-201ENST00000230085 CA7P43166 264 aa17.27■□□□□ 0.35
SNX3-201ENST00000230085 MRPL52Q86TS9 123 aaKnown RBP17.27■□□□□ 0.35
SNX3-201ENST00000230085 ZNF664Q8N3J9 261 aa17.27■□□□□ 0.35
SNX3-201ENST00000230085 LHX4Q969G2 390 aa17.27■□□□□ 0.35
SNX3-201ENST00000230085 HIST1H2AAQ96QV6 131 aa17.27■□□□□ 0.35
SNX3-201ENST00000230085 TRIB1Q96RU8 372 aa17.27■□□□□ 0.35
SNX3-201ENST00000230085 NEU1Q99519 415 aa17.27■□□□□ 0.35
SNX3-201ENST00000230085 MRPL37Q9BZE1 423 aaKnown RBP17.27■□□□□ 0.35
SNX3-201ENST00000230085 FAM215AQ9Y5M1 114 aa17.27■□□□□ 0.35
SNX3-201ENST00000230085 MPC1Q9Y5U8 109 aa17.27■□□□□ 0.35
SNX3-201ENST00000230085 HIVEP3Q5T1R4 2406 aa17.26■□□□□ 0.35
SNX3-201ENST00000230085 SOX15O60248 233 aa17.26■□□□□ 0.35
SNX3-201ENST00000230085 PSMB3P49720 205 aa17.26■□□□□ 0.35
SNX3-201ENST00000230085 MSMO1Q15800 293 aa17.26■□□□□ 0.35
SNX3-201ENST00000230085 RPP25LQ8N5L8 163 aaKnown RBP17.26■□□□□ 0.35
SNX3-201ENST00000230085 NAXEQ8NCW5 288 aa17.26■□□□□ 0.35
SNX3-201ENST00000230085 HS3ST6Q96QI5 342 aa17.26■□□□□ 0.35
SNX3-201ENST00000230085 CHODLQ9H9P2 273 aa17.26■□□□□ 0.35
SNX3-201ENST00000230085 SLC39A9Q9NUM3 307 aa17.26■□□□□ 0.35
SNX3-201ENST00000230085 TRAV24A0A0B4J272 114 aa17.25■□□□□ 0.35
SNX3-201ENST00000230085 RNF212BA8MTL3 300 aa17.25■□□□□ 0.35
SNX3-201ENST00000230085 H3BP45 60 aa17.25■□□□□ 0.35
SNX3-201ENST00000230085 PLA2G2AP14555 144 aa17.25■□□□□ 0.35
SNX3-201ENST00000230085 GALR1P47211 349 aa17.25■□□□□ 0.35
SNX3-201ENST00000230085 CASP6P55212 293 aa17.25■□□□□ 0.35
SNX3-201ENST00000230085 ZNF585BQ52M93 769 aa17.25■□□□□ 0.35
SNX3-201ENST00000230085 C4orf17Q53FE4 359 aa17.25■□□□□ 0.35
SNX3-201ENST00000230085 C20orf204Q6ZNR8 217 aa17.25■□□□□ 0.35
SNX3-201ENST00000230085 ZNF573Q86YE8 665 aa17.25■□□□□ 0.35
SNX3-201ENST00000230085 LILRB2Q8N423 598 aa17.25■□□□□ 0.35
SNX3-201ENST00000230085 OR5P3Q8WZ94 311 aa17.25■□□□□ 0.35
SNX3-201ENST00000230085 TMEM18Q96B42 140 aa17.25■□□□□ 0.35
SNX3-201ENST00000230085 GPHA2Q96T91 129 aa17.25■□□□□ 0.35
SNX3-201ENST00000230085 ERRFI1Q9UJM3 462 aaPredicted RBP17.25■□□□□ 0.35
SNX3-201ENST00000230085 PCNX1Q96RV3 2341 aa17.25■□□□□ 0.35
SNX3-201ENST00000230085 P0C879 139 aa17.25■□□□□ 0.35
SNX3-201ENST00000230085 RNF224P0DH78 156 aa17.25■□□□□ 0.35
SNX3-201ENST00000230085 GPM6AP51674 278 aa17.25■□□□□ 0.35
SNX3-201ENST00000230085 TESK1Q15569 626 aa17.25■□□□□ 0.35
SNX3-201ENST00000230085 ZNF124Q15973 351 aa17.25■□□□□ 0.35
SNX3-201ENST00000230085 SSX2Q16385 188 aa17.25■□□□□ 0.35
SNX3-201ENST00000230085 VWC2Q2TAL6 325 aa17.25■□□□□ 0.35
SNX3-201ENST00000230085 SEM1Q6ZVN7 128 aa17.25■□□□□ 0.35
SNX3-201ENST00000230085 MRPL21Q7Z2W9 205 aaKnown RBP17.25■□□□□ 0.35
SNX3-201ENST00000230085 C5orf24Q7Z6I8 188 aa17.25■□□□□ 0.35
SNX3-201ENST00000230085 ZBTB34Q8NCN2 500 aa17.25■□□□□ 0.35
SNX3-201ENST00000230085 NEK7Q8TDX7 302 aa17.25■□□□□ 0.35
SNX3-201ENST00000230085 PRO1933Q9H354 126 aa17.25■□□□□ 0.35
SNX3-201ENST00000230085 OR6C3Q9NZP0 311 aa17.25■□□□□ 0.35
SNX3-201ENST00000230085 HSPB7Q9UBY9 170 aa17.25■□□□□ 0.35
SNX3-201ENST00000230085 ARHGAP21Q5T5U3 1957 aa17.25■□□□□ 0.35
SNX3-201ENST00000230085 XKRY2A2RUG3 117 aa17.24■□□□□ 0.35
SNX3-201ENST00000230085 IL18BPO95998 194 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms