RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 Q8N7P7 452 aa11.76□□□□□ -0.53
SCNN1A-201ENST00000228916 ZNF709Q8N972 641 aa11.76□□□□□ -0.53
SCNN1A-201ENST00000228916 SDSLQ96GA7 329 aa11.76□□□□□ -0.53
SCNN1A-201ENST00000228916 GOLT1BQ9Y3E0 138 aa11.76□□□□□ -0.53
SCNN1A-201ENST00000228916 MPC1Q9Y5U8 109 aa11.76□□□□□ -0.53
SCNN1A-201ENST00000228916 MRPL33O75394 65 aaKnown RBP11.76□□□□□ -0.53
SCNN1A-201ENST00000228916 RHBDL1O75783 438 aa11.76□□□□□ -0.53
SCNN1A-201ENST00000228916 EGR1P18146 543 aa11.76□□□□□ -0.53
SCNN1A-201ENST00000228916 SPINK2P20155 84 aa11.76□□□□□ -0.53
SCNN1A-201ENST00000228916 ADMP35318 185 aa11.76□□□□□ -0.53
SCNN1A-201ENST00000228916 ZNF705AQ6ZN79 300 aaPredicted RBP11.76□□□□□ -0.53
SCNN1A-201ENST00000228916 ZNF114Q8NC26 417 aa11.76□□□□□ -0.53
SCNN1A-201ENST00000228916 SGMS2Q8NHU3 365 aa11.76□□□□□ -0.53
SCNN1A-201ENST00000228916 CMTM2Q8TAZ6 248 aa11.76□□□□□ -0.53
SCNN1A-201ENST00000228916 UBALD1Q8TB05 177 aa11.76□□□□□ -0.53
SCNN1A-201ENST00000228916 KCNIP2Q9NS61 270 aa11.76□□□□□ -0.53
SCNN1A-201ENST00000228916 MBNL3Q9NUK0 354 aaKnown RBP11.76□□□□□ -0.53
SCNN1A-201ENST00000228916 AURKAIP1Q9NWT8 199 aaPredicted RBP11.76□□□□□ -0.53
SCNN1A-201ENST00000228916 IGKV3D-15A0A087WSY6 115 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 ODAMA1E959 279 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 RAMP3O60896 148 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 IL11RAQ14626 422 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 TPTE2P1Q5T6R2 138 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 CST9LP1Q5W188 147 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 Q6ZWC4 215 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 SFRP2Q96HF1 295 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 MIEN1Q9BRT3 115 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 DERL1Q9BUN8 251 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 IL17BQ9UHF5 180 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 TRAPPC2LQ9UL33 140 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 TP53TG3Q9ULZ0 132 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 DIDO1Q9BTC0 2240 aaKnown RBP11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 ANKRD30BLA7E2S9 258 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 RBFOX2O43251 390 aaKnown RBP eCLIP11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 NDUFB4O95168 129 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 CRYAAP02489 173 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 ESDP10768 282 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 G6PCP35575 357 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 ATP5G3P48201 142 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 C9orf135Q5VTT2 229 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 POM121L2Q96KW2 1035 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 ESPL1Q14674 2120 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 C17orf112F2Z3M2 114 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 ZG16O60844 167 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 KRASP01116 189 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 IRF2P14316 349 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 LINC00310P59036 64 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 PAFAH1B2P68402 229 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 TRIP6Q15654 476 aaKnown RBP11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 TCF23Q7RTU1 214 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 DTD1Q8TEA8 209 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 RAB1CQ92928 201 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 WIPI2Q9Y4P8 454 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 DOCK11Q5JSL3 2073 aa11.75□□□□□ -0.53
SCNN1A-201ENST00000228916 F6UZH7 168 aa11.74□□□□□ -0.53
SCNN1A-201ENST00000228916 J3QT63 122 aa11.74□□□□□ -0.53
SCNN1A-201ENST00000228916 TRAPPC6AO75865 159 aa11.74□□□□□ -0.53
SCNN1A-201ENST00000228916 EIF4EBP1Q13541 118 aaPredicted RBP11.74□□□□□ -0.53
SCNN1A-201ENST00000228916 OR2Y1Q8NGV0 311 aa11.74□□□□□ -0.53
SCNN1A-201ENST00000228916 CHODLQ9H9P2 273 aa11.74□□□□□ -0.53
SCNN1A-201ENST00000228916 NPSP0C0P6 89 aa11.74□□□□□ -0.53
SCNN1A-201ENST00000228916 FOXG1P55316 489 aaPredicted RBP11.74□□□□□ -0.53
SCNN1A-201ENST00000228916 GFRA1P56159 465 aa11.74□□□□□ -0.53
SCNN1A-201ENST00000228916 TDRG1Q3Y452 100 aa11.74□□□□□ -0.53
SCNN1A-201ENST00000228916 TOMM20LQ6UXN7 152 aa11.74□□□□□ -0.53
SCNN1A-201ENST00000228916 ZNF645Q8N7E2 425 aa11.74□□□□□ -0.53
SCNN1A-201ENST00000228916 ZBTB34Q8NCN2 500 aa11.74□□□□□ -0.53
SCNN1A-201ENST00000228916 IFI44Q8TCB0 444 aa11.74□□□□□ -0.53
SCNN1A-201ENST00000228916 ZDHHC16Q969W1 377 aa11.74□□□□□ -0.53
SCNN1A-201ENST00000228916 CIB3Q96Q77 187 aaPredicted RBP11.74□□□□□ -0.53
SCNN1A-201ENST00000228916 OR51B6Q9H340 312 aa11.74□□□□□ -0.53
SCNN1A-201ENST00000228916 MRPS18CQ9Y3D5 142 aaKnown RBP11.74□□□□□ -0.53
SCNN1A-201ENST00000228916 TRBV20OR9-2A0A075B6H5 130 aa11.73□□□□□ -0.53
SCNN1A-201ENST00000228916 A6NNC1 897 aa11.73□□□□□ -0.53
SCNN1A-201ENST00000228916 OR2H2O95918 312 aa11.73□□□□□ -0.53
SCNN1A-201ENST00000228916 LINC00614P0C842 121 aa11.73□□□□□ -0.53
SCNN1A-201ENST00000228916 TPPP2P59282 170 aa11.73□□□□□ -0.53
SCNN1A-201ENST00000228916 RPL30P62888 115 aaKnown RBP11.73□□□□□ -0.53
SCNN1A-201ENST00000228916 C5orf30Q96GV9 206 aa11.73□□□□□ -0.53
SCNN1A-201ENST00000228916 PARD6AQ9NPB6 346 aa11.73□□□□□ -0.53
SCNN1A-201ENST00000228916 DEPPQ9NTK1 212 aa11.73□□□□□ -0.53
SCNN1A-201ENST00000228916 GRIFINA4D1Z8 144 aa11.73□□□□□ -0.53
SCNN1A-201ENST00000228916 PGPEP1LA6NFU8 196 aa11.73□□□□□ -0.53
SCNN1A-201ENST00000228916 SIRPB1O00241 398 aa11.73□□□□□ -0.53
SCNN1A-201ENST00000228916 CD33P20138 364 aa11.73□□□□□ -0.53
SCNN1A-201ENST00000228916 CD82P27701 267 aa11.73□□□□□ -0.53
SCNN1A-201ENST00000228916 BRS3P32247 399 aa11.73□□□□□ -0.53
SCNN1A-201ENST00000228916 Q0VFX4 171 aa11.73□□□□□ -0.53
SCNN1A-201ENST00000228916 USF3Q68DE3 2245 aa11.73□□□□□ -0.53
SCNN1A-201ENST00000228916 LHX2P50458 406 aa11.73□□□□□ -0.53
SCNN1A-201ENST00000228916 UBE2G2P60604 165 aa11.73□□□□□ -0.53
SCNN1A-201ENST00000228916 RPS16P62249 146 aaKnown RBP11.73□□□□□ -0.53
SCNN1A-201ENST00000228916 ZDHHC11Q9H8X9 412 aa11.73□□□□□ -0.53
SCNN1A-201ENST00000228916 MDFIC2A0A1B0GVS7 189 aa11.72□□□□□ -0.53
SCNN1A-201ENST00000228916 S1PR2O95136 353 aa11.72□□□□□ -0.53
SCNN1A-201ENST00000228916 CXCL12P48061 93 aa11.72□□□□□ -0.53
SCNN1A-201ENST00000228916 BRWD1-AS2P59051 145 aa11.72□□□□□ -0.53
SCNN1A-201ENST00000228916 ZNF816Q0VGE8 651 aaPredicted RBP11.72□□□□□ -0.53
SCNN1A-201ENST00000228916 WDR83OSQ9Y284 106 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms