RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 HS3ST1O14792 307 aa11.91□□□□□ -0.5
SF1-201ENST00000227503 DNPH1O43598 174 aa11.91□□□□□ -0.5
SF1-201ENST00000227503 TDGF1P13385 188 aa11.91□□□□□ -0.5
SF1-201ENST00000227503 SOX8P57073 446 aa11.91□□□□□ -0.5
SF1-201ENST00000227503 SERF2P84101 59 aa11.91□□□□□ -0.5
SF1-201ENST00000227503 LYG1Q8N1E2 194 aa11.91□□□□□ -0.5
SF1-201ENST00000227503 FGFBP3Q8TAT2 258 aa11.91□□□□□ -0.5
SF1-201ENST00000227503 CPT1CQ8TCG5 803 aa11.91□□□□□ -0.5
SF1-201ENST00000227503 GJE1A6NN92 205 aa11.9□□□□□ -0.5
SF1-201ENST00000227503 CCL4P13236 92 aa11.9□□□□□ -0.5
SF1-201ENST00000227503 HBG1P69891 147 aa11.9□□□□□ -0.5
SF1-201ENST00000227503 HBG2P69892 147 aa11.9□□□□□ -0.5
SF1-201ENST00000227503 PSG4Q00888 419 aa11.9□□□□□ -0.5
SF1-201ENST00000227503 MSMO1Q15800 293 aa11.9□□□□□ -0.5
SF1-201ENST00000227503 SPATA45Q537H7 98 aa11.9□□□□□ -0.5
SF1-201ENST00000227503 TMEM144Q7Z5S9 345 aa11.9□□□□□ -0.5
SF1-201ENST00000227503 YRDCQ86U90 279 aaKnown RBP11.9□□□□□ -0.5
SF1-201ENST00000227503 GGNQ86UU5 652 aa11.9□□□□□ -0.5
SF1-201ENST00000227503 SAXO1Q8IYX7 474 aa11.9□□□□□ -0.5
SF1-201ENST00000227503 RDH5Q92781 318 aa11.9□□□□□ -0.5
SF1-201ENST00000227503 TRBV20OR9-2A0A075B6H5 130 aa11.9□□□□□ -0.5
SF1-201ENST00000227503 KIAA1644Q3SXP7 199 aa11.9□□□□□ -0.5
SF1-201ENST00000227503 Q6ZN92 141 aa11.9□□□□□ -0.5
SF1-201ENST00000227503 OR5AU1Q8NGC0 362 aa11.9□□□□□ -0.5
SF1-201ENST00000227503 PSMF1Q92530 271 aa11.9□□□□□ -0.5
SF1-201ENST00000227503 TXN2Q99757 166 aa11.9□□□□□ -0.5
SF1-201ENST00000227503 PLSCR2Q9NRY7 297 aa11.9□□□□□ -0.5
SF1-201ENST00000227503 IL36GQ9NZH8 169 aa11.9□□□□□ -0.5
SF1-201ENST00000227503 LOC102724200A0A096LPH7 203 aaPredicted RBP11.89□□□□□ -0.51
SF1-201ENST00000227503 TRAV38-1A0A0B4J264 116 aa11.89□□□□□ -0.51
SF1-201ENST00000227503 hCG_38984A0A1B0GV85 526 aa11.89□□□□□ -0.51
SF1-201ENST00000227503 CRISP2P16562 243 aa11.89□□□□□ -0.51
SF1-201ENST00000227503 LHX2P50458 406 aa11.89□□□□□ -0.51
SF1-201ENST00000227503 SAPCD1Q5SSQ6 148 aa11.89□□□□□ -0.51
SF1-201ENST00000227503 LEMD1Q68G75 181 aa11.89□□□□□ -0.51
SF1-201ENST00000227503 OR2Y1Q8NGV0 311 aa11.89□□□□□ -0.51
SF1-201ENST00000227503 OR1L1Q8NH94 360 aa11.89□□□□□ -0.51
SF1-201ENST00000227503 CLN8Q9UBY8 286 aa11.89□□□□□ -0.51
SF1-201ENST00000227503 PILRBQ9UKJ0 227 aa11.89□□□□□ -0.51
SF1-201ENST00000227503 ATP23Q9Y6H3 246 aa11.89□□□□□ -0.51
SF1-201ENST00000227503 OR2H1Q9GZK4 316 aa11.89□□□□□ -0.51
SF1-201ENST00000227503 R4GN57 208 aa11.89□□□□□ -0.51
SF1-201ENST00000227503 PMCHP20382 165 aa11.89□□□□□ -0.51
SF1-201ENST00000227503 CCNOP22674 350 aa11.89□□□□□ -0.51
SF1-201ENST00000227503 SRD5A2P31213 254 aa11.89□□□□□ -0.51
SF1-201ENST00000227503 FUT6P51993 359 aa11.89□□□□□ -0.51
SF1-201ENST00000227503 SLC35B1P78383 322 aa11.89□□□□□ -0.51
SF1-201ENST00000227503 AAED1Q7RTV5 226 aa11.89□□□□□ -0.51
SF1-201ENST00000227503 PINX1Q96BK5 328 aaKnown RBP11.89□□□□□ -0.51
SF1-201ENST00000227503 MRPL18Q9H0U6 180 aaKnown RBP11.89□□□□□ -0.51
SF1-201ENST00000227503 KCNS2Q9ULS6 477 aa11.89□□□□□ -0.51
SF1-201ENST00000227503 CTXND1A0A1B0GTU2 59 aa11.88□□□□□ -0.51
SF1-201ENST00000227503 DIRC3C9JPN6 131 aa11.88□□□□□ -0.51
SF1-201ENST00000227503 CCL2P13500 99 aa11.88□□□□□ -0.51
SF1-201ENST00000227503 UBE2NP61088 152 aaKnown RBP11.88□□□□□ -0.51
SF1-201ENST00000227503 HLA-DRB5Q30154 266 aa11.88□□□□□ -0.51
SF1-201ENST00000227503 MED12LQ86YW9 2145 aa11.88□□□□□ -0.51
SF1-201ENST00000227503 ZNF391Q9UJN7 358 aa11.88□□□□□ -0.51
SF1-201ENST00000227503 RBM7Q9Y580 266 aaKnown RBP11.88□□□□□ -0.51
SF1-201ENST00000227503 LOC105371242A0A075B767 164 aa11.88□□□□□ -0.51
SF1-201ENST00000227503 MLNRO43193 412 aa11.88□□□□□ -0.51
SF1-201ENST00000227503 CXCL13O43927 109 aa11.88□□□□□ -0.51
SF1-201ENST00000227503 WDR1O75083 606 aa11.88□□□□□ -0.51
SF1-201ENST00000227503 TUSC2O75896 110 aa11.88□□□□□ -0.51
SF1-201ENST00000227503 IGHEP01854 428 aa11.88□□□□□ -0.51
SF1-201ENST00000227503 IER3P46695 156 aa11.88□□□□□ -0.51
SF1-201ENST00000227503 GPM6AP51674 278 aa11.88□□□□□ -0.51
SF1-201ENST00000227503 SELENOTP62341 195 aa11.88□□□□□ -0.51
SF1-201ENST00000227503 LCN2P80188 198 aa11.88□□□□□ -0.51
SF1-201ENST00000227503 OR8B8Q15620 311 aa11.88□□□□□ -0.51
SF1-201ENST00000227503 KRTCAP3Q53RY4 240 aa11.88□□□□□ -0.51
SF1-201ENST00000227503 SLC23A3Q6PIS1 610 aa11.88□□□□□ -0.51
SF1-201ENST00000227503 PCSK4Q6UW60 755 aa11.88□□□□□ -0.51
SF1-201ENST00000227503 KCNE4Q8WWG9 221 aa11.88□□□□□ -0.51
SF1-201ENST00000227503 FOXB1Q99853 325 aa11.88□□□□□ -0.51
SF1-201ENST00000227503 CBY3A6NI87 242 aa11.87□□□□□ -0.51
SF1-201ENST00000227503 IGHV3-9P01782 118 aa11.87□□□□□ -0.51
SF1-201ENST00000227503 RFPL3SP0C7P2 107 aa11.87□□□□□ -0.51
SF1-201ENST00000227503 SSPNQ14714 243 aa11.87□□□□□ -0.51
SF1-201ENST00000227503 CEACAM16Q2WEN9 425 aa11.87□□□□□ -0.51
SF1-201ENST00000227503 TRIM61Q5EBN2 209 aa11.87□□□□□ -0.51
SF1-201ENST00000227503 PMS2CLQ68D20 193 aa11.87□□□□□ -0.51
SF1-201ENST00000227503 FAM53AQ6NSI3 398 aaPredicted RBP11.87□□□□□ -0.51
SF1-201ENST00000227503 Q8N976 141 aa11.87□□□□□ -0.51
SF1-201ENST00000227503 APH1AQ96BI3 265 aa11.87□□□□□ -0.51
SF1-201ENST00000227503 SFRP2Q96HF1 295 aa11.87□□□□□ -0.51
SF1-201ENST00000227503 FGF23Q9GZV9 251 aaPredicted RBP11.87□□□□□ -0.51
SF1-201ENST00000227503 DOCK10Q96BY6 2186 aa11.87□□□□□ -0.51
SF1-201ENST00000227503 NTN3O00634 580 aaPredicted RBP11.87□□□□□ -0.51
SF1-201ENST00000227503 CLDN15P56746 228 aa11.87□□□□□ -0.51
SF1-201ENST00000227503 MCEMP1Q8IX19 187 aa11.87□□□□□ -0.51
SF1-201ENST00000227503 ST6GALNAC3Q8NDV1 305 aa11.87□□□□□ -0.51
SF1-201ENST00000227503 ZDHHC16Q969W1 377 aa11.87□□□□□ -0.51
SF1-201ENST00000227503 ALKBH7Q9BT30 221 aaPredicted RBP11.87□□□□□ -0.51
SF1-201ENST00000227503 SIT1Q9Y3P8 196 aa11.87□□□□□ -0.51
SF1-201ENST00000227503 WIPI2Q9Y4P8 454 aa11.87□□□□□ -0.51
SF1-201ENST00000227503 LNP1A1A4G5 178 aa11.86□□□□□ -0.51
SF1-201ENST00000227503 NKX6-3A6NJ46 265 aa11.86□□□□□ -0.51
SF1-201ENST00000227503 HYPMO75409 117 aa11.86□□□□□ -0.51
SF1-201ENST00000227503 HNRNPA3P51991 378 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms