RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 LINC00205P59089 165 aa11.33□□□□□ -0.6
SEC61B-201ENST00000223641 TAS2R31P59538 309 aa11.33□□□□□ -0.6
SEC61B-201ENST00000223641 TRIM16LQ309B1 348 aa11.33□□□□□ -0.6
SEC61B-201ENST00000223641 TMED4Q7Z7H5 227 aa11.33□□□□□ -0.6
SEC61B-201ENST00000223641 TCTEX1D1Q8N7M0 179 aa11.33□□□□□ -0.6
SEC61B-201ENST00000223641 ZNF383Q8NA42 475 aa11.33□□□□□ -0.6
SEC61B-201ENST00000223641 OR5AN1Q8NGI8 311 aa11.33□□□□□ -0.6
SEC61B-201ENST00000223641 CAPSLQ8WWF8 208 aa11.33□□□□□ -0.6
SEC61B-201ENST00000223641 CFHR4Q92496 578 aa11.33□□□□□ -0.6
SEC61B-201ENST00000223641 RPEQ96AT9 228 aa11.33□□□□□ -0.6
SEC61B-201ENST00000223641 ADTRPQ96IZ2 230 aa11.33□□□□□ -0.6
SEC61B-201ENST00000223641 NAA60Q9H7X0 242 aa11.33□□□□□ -0.6
SEC61B-201ENST00000223641 YAE1D1Q9NRH1 226 aa11.33□□□□□ -0.6
SEC61B-201ENST00000223641 TLN2Q9Y4G6 2542 aa11.33□□□□□ -0.6
SEC61B-201ENST00000223641 RNF212BA8MTL3 300 aa11.32□□□□□ -0.6
SEC61B-201ENST00000223641 B3GALNT1O75752 331 aa11.32□□□□□ -0.6
SEC61B-201ENST00000223641 OR4E1P0C645 316 aa11.32□□□□□ -0.6
SEC61B-201ENST00000223641 AKR1C4P17516 323 aa11.32□□□□□ -0.6
SEC61B-201ENST00000223641 REG1BP48304 166 aa11.32□□□□□ -0.6
SEC61B-201ENST00000223641 TAGLNQ01995 201 aaKnown RBP11.32□□□□□ -0.6
SEC61B-201ENST00000223641 CATR1Q13166 79 aa11.32□□□□□ -0.6
SEC61B-201ENST00000223641 SSX2Q16385 188 aa11.32□□□□□ -0.6
SEC61B-201ENST00000223641 CCDC144NLQ6NUI1 221 aa11.32□□□□□ -0.6
SEC61B-201ENST00000223641 DRAXINQ8NBI3 349 aaPredicted RBP11.32□□□□□ -0.6
SEC61B-201ENST00000223641 MRPL20Q9BYC9 149 aaKnown RBP11.32□□□□□ -0.6
SEC61B-201ENST00000223641 HILPDAQ9Y5L2 63 aa11.32□□□□□ -0.6
SEC61B-201ENST00000223641 MXRA5Q9NR99 2828 aa11.32□□□□□ -0.6
SEC61B-201ENST00000223641 A0A0B4J293 547 aa11.31□□□□□ -0.6
SEC61B-201ENST00000223641 A0A0U1RQK1 487 aa11.31□□□□□ -0.6
SEC61B-201ENST00000223641 C3orf85A0A1B0GTC6 90 aa11.31□□□□□ -0.6
SEC61B-201ENST00000223641 FAM90A9PA6NNJ1 464 aa11.31□□□□□ -0.6
SEC61B-201ENST00000223641 VGLL3A8MV65 326 aa11.31□□□□□ -0.6
SEC61B-201ENST00000223641 H0Y980 276 aa11.31□□□□□ -0.6
SEC61B-201ENST00000223641 H0YJW9 148 aa11.31□□□□□ -0.6
SEC61B-201ENST00000223641 RBFOX2O43251 390 aaKnown RBP eCLIP11.31□□□□□ -0.6
SEC61B-201ENST00000223641 PRAF2O60831 178 aa11.31□□□□□ -0.6
SEC61B-201ENST00000223641 DHFRP00374 187 aa11.31□□□□□ -0.6
SEC61B-201ENST00000223641 DYNLT3P51808 116 aa11.31□□□□□ -0.6
SEC61B-201ENST00000223641 RAB25P57735 213 aa11.31□□□□□ -0.6
SEC61B-201ENST00000223641 PPP1R1AQ13522 171 aa11.31□□□□□ -0.6
SEC61B-201ENST00000223641 ZNF585BQ52M93 769 aa11.31□□□□□ -0.6
SEC61B-201ENST00000223641 CLEC9AQ6UXN8 241 aa11.31□□□□□ -0.6
SEC61B-201ENST00000223641 GLDNQ6ZMI3 551 aaPredicted RBP11.31□□□□□ -0.6
SEC61B-201ENST00000223641 SGPP2Q8IWX5 399 aa11.31□□□□□ -0.6
SEC61B-201ENST00000223641 GLYATL2Q8WU03 294 aa11.31□□□□□ -0.6
SEC61B-201ENST00000223641 TP53RKQ96S44 253 aa11.31□□□□□ -0.6
SEC61B-201ENST00000223641 PRDM13Q9H4Q3 707 aa11.31□□□□□ -0.6
SEC61B-201ENST00000223641 LIN7CQ9NUP9 197 aaKnown RBP11.31□□□□□ -0.6
SEC61B-201ENST00000223641 TEX13DA0A0J9YY54 714 aaPredicted RBP11.3□□□□□ -0.6
SEC61B-201ENST00000223641 C9orf170A2RU37 121 aa11.3□□□□□ -0.6
SEC61B-201ENST00000223641 C7orf66A4D0T2 115 aa11.3□□□□□ -0.6
SEC61B-201ENST00000223641 TIMM23O14925 209 aa11.3□□□□□ -0.6
SEC61B-201ENST00000223641 SFT2D2O95562 160 aa11.3□□□□□ -0.6
SEC61B-201ENST00000223641 UCP1P25874 307 aa11.3□□□□□ -0.6
SEC61B-201ENST00000223641 PAX6P26367 422 aa11.3□□□□□ -0.6
SEC61B-201ENST00000223641 CD1BP29016 333 aa11.3□□□□□ -0.6
SEC61B-201ENST00000223641 MC5RP33032 325 aa11.3□□□□□ -0.6
SEC61B-201ENST00000223641 DHRS2Q13268 280 aa11.3□□□□□ -0.6
SEC61B-201ENST00000223641 EBI3Q14213 229 aa11.3□□□□□ -0.6
SEC61B-201ENST00000223641 TMEM187Q14656 261 aa11.3□□□□□ -0.6
SEC61B-201ENST00000223641 LYG2Q86SG7 212 aa11.3□□□□□ -0.6
SEC61B-201ENST00000223641 BCL6BQ8N143 479 aaPredicted RBP11.3□□□□□ -0.6
SEC61B-201ENST00000223641 OR51H1Q8NH63 302 aa11.3□□□□□ -0.6
SEC61B-201ENST00000223641 TCTEX1D2Q8WW35 142 aa11.3□□□□□ -0.6
SEC61B-201ENST00000223641 BEX2Q9BXY8 128 aa11.3□□□□□ -0.6
SEC61B-201ENST00000223641 MS4A7Q9GZW8 240 aaPredicted RBP11.3□□□□□ -0.6
SEC61B-201ENST00000223641 BEX1Q9HBH7 125 aa11.3□□□□□ -0.6
SEC61B-201ENST00000223641 KCNIP3Q9Y2W7 256 aa11.3□□□□□ -0.6
SEC61B-201ENST00000223641 PRELID3BQ9Y3B1 194 aa11.3□□□□□ -0.6
SEC61B-201ENST00000223641 SOX21Q9Y651 276 aaPredicted RBP11.3□□□□□ -0.6
SEC61B-201ENST00000223641 SNRPGP15A8MWD9 76 aa11.29□□□□□ -0.6
SEC61B-201ENST00000223641 RAMP3O60896 148 aa11.29□□□□□ -0.6
SEC61B-201ENST00000223641 DUS4LO95620 317 aaKnown RBP11.29□□□□□ -0.6
SEC61B-201ENST00000223641 CDS2O95674 445 aa11.29□□□□□ -0.6
SEC61B-201ENST00000223641 FBP1P09467 338 aa11.29□□□□□ -0.6
SEC61B-201ENST00000223641 OR5AC1P0C628 307 aa11.29□□□□□ -0.6
SEC61B-201ENST00000223641 RRASP10301 218 aa11.29□□□□□ -0.6
SEC61B-201ENST00000223641 KIR2DS2P43631 304 aa11.29□□□□□ -0.6
SEC61B-201ENST00000223641 AANATQ16613 207 aa11.29□□□□□ -0.6
SEC61B-201ENST00000223641 C11orf88Q6PI97 169 aa11.29□□□□□ -0.6
SEC61B-201ENST00000223641 Q6ZNX1 250 aa11.29□□□□□ -0.6
SEC61B-201ENST00000223641 SPAG16Q8N0X2 631 aa11.29□□□□□ -0.6
SEC61B-201ENST00000223641 CD300LFQ8TDQ1 290 aa11.29□□□□□ -0.6
SEC61B-201ENST00000223641 TMEM56Q96MV1 263 aa11.29□□□□□ -0.6
SEC61B-201ENST00000223641 TMEM222Q9H0R3 208 aa11.29□□□□□ -0.6
SEC61B-201ENST00000223641 SLC35D1Q9NTN3 355 aa11.29□□□□□ -0.6
SEC61B-201ENST00000223641 TMEM56-RWDD3S4R434 201 aa11.29□□□□□ -0.6
SEC61B-201ENST00000223641 FCGR3BO75015 233 aa11.28□□□□□ -0.6
SEC61B-201ENST00000223641 IFNA2P01563 188 aa11.28□□□□□ -0.6
SEC61B-201ENST00000223641 HLA-AP01891 365 aaKnown RBP11.28□□□□□ -0.6
SEC61B-201ENST00000223641 RPA2P15927 270 aa11.28□□□□□ -0.6
SEC61B-201ENST00000223641 HNF1AP20823 631 aa11.28□□□□□ -0.6
SEC61B-201ENST00000223641 TATDN3Q17R31 274 aa11.28□□□□□ -0.6
SEC61B-201ENST00000223641 SP6Q3SY56 376 aa11.28□□□□□ -0.6
SEC61B-201ENST00000223641 C4orf46Q504U0 113 aa11.28□□□□□ -0.6
SEC61B-201ENST00000223641 TMEM177Q53S58 311 aa11.28□□□□□ -0.6
SEC61B-201ENST00000223641 DHRS7BQ6IAN0 325 aaPredicted RBP11.28□□□□□ -0.6
SEC61B-201ENST00000223641 IL17RELQ6ZVW7 336 aa11.28□□□□□ -0.6
SEC61B-201ENST00000223641 MOB3BQ86TA1 216 aa11.28□□□□□ -0.6
SEC61B-201ENST00000223641 THNSL2Q86YJ6 484 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms