RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 FAM90A22PA8MWA6 464 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 FAM90A12PA8MX19 464 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 FAM90A5PA8MXJ8 464 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 FAM90A23PA8MXZ1 464 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 FAM90A15PP0C7V4 464 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 FAM90A13PP0C7W8 464 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 FAM90A14PP0C7W9 464 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 FAM90A24PP0C7X0 464 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 ZNF735P0CB33 412 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 FXYD3Q14802 87 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 FAM106AQ4KMX7 169 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 OR10J6PQ8NGY7 276 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 FAM210BQ96KR6 192 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 TMEM222Q9H0R3 208 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 C7orf69Q9H7B7 122 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 IL36RNQ9UBH0 155 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 IGHV3OR16-13A0A075B7E8 117 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 IGHV3-74A0A0B4J1X5 117 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 A0A1W2PS18 150 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 H0YL77 283 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 VSIG10L2P0DP72 767 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 C1orf100Q5SVJ3 147 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 GP6Q9HCN6 339 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 VAX2Q9UIW0 290 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 SS18L1O75177 396 aaPredicted RBP15.74■□□□□ 0.11
CLIP2-201ENST00000223398 OR2A4O95047 310 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 CXorf66Q5JRM2 361 aaPredicted RBP15.74■□□□□ 0.11
CLIP2-201ENST00000223398 TOMM20LQ6UXN7 152 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 OR2A7Q96R45 310 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 JPT1Q9UK76 154 aa15.74■□□□□ 0.11
CLIP2-201ENST00000223398 TRBV5-7A0A0A0MS05 114 aa15.73■□□□□ 0.11
CLIP2-201ENST00000223398 S1PR2O95136 353 aa15.73■□□□□ 0.11
CLIP2-201ENST00000223398 PEAR1Q5VY43 1037 aaPredicted RBP15.73■□□□□ 0.11
CLIP2-201ENST00000223398 ZNF880Q6PDB4 577 aa15.73■□□□□ 0.11
CLIP2-201ENST00000223398 ZCCHC24Q8N2G6 241 aaKnown RBP15.73■□□□□ 0.11
CLIP2-201ENST00000223398 FADS6Q8N9I5 356 aa15.73■□□□□ 0.11
CLIP2-201ENST00000223398 Q96M66 194 aa15.73■□□□□ 0.11
CLIP2-201ENST00000223398 RSG1Q9BU20 258 aa15.73■□□□□ 0.11
CLIP2-201ENST00000223398 TMEM78Q5T7P6 136 aa15.73■□□□□ 0.11
CLIP2-201ENST00000223398 OR2D3Q8NGH3 330 aa15.73■□□□□ 0.11
CLIP2-201ENST00000223398 ANGPTL6Q8NI99 470 aa15.73■□□□□ 0.11
CLIP2-201ENST00000223398 CCDC88CQ9P219 2028 aa15.73■□□□□ 0.11
CLIP2-201ENST00000223398 CRXO43186 299 aaPredicted RBP15.73■□□□□ 0.11
CLIP2-201ENST00000223398 RPL7P18124 248 aaKnown RBP15.73■□□□□ 0.11
CLIP2-201ENST00000223398 RPL39P5Q59GN2 51 aa15.73■□□□□ 0.11
CLIP2-201ENST00000223398 PSME4Q14997 1843 aa15.73■□□□□ 0.11
CLIP2-201ENST00000223398 PHOX2AO14813 284 aa15.73■□□□□ 0.11
CLIP2-201ENST00000223398 IGHV3-23P01764 117 aa15.73■□□□□ 0.11
CLIP2-201ENST00000223398 MFAP4P55083 255 aa15.73■□□□□ 0.11
CLIP2-201ENST00000223398 SDK2Q58EX2 2172 aa15.73■□□□□ 0.11
CLIP2-201ENST00000223398 PINLYPA6NC86 204 aa15.73■□□□□ 0.11
CLIP2-201ENST00000223398 BMPR1BO00238 502 aa15.73■□□□□ 0.11
CLIP2-201ENST00000223398 CSRP3P50461 194 aa15.73■□□□□ 0.11
CLIP2-201ENST00000223398 CLDN18P56856 261 aa15.73■□□□□ 0.11
CLIP2-201ENST00000223398 GBGT1Q8N5D6 347 aa15.73■□□□□ 0.11
CLIP2-201ENST00000223398 S4R3C0 116 aa15.73■□□□□ 0.11
CLIP2-201ENST00000223398 PTPRFP10586 1907 aa15.72■□□□□ 0.11
CLIP2-201ENST00000223398 CTXND1A0A1B0GTU2 59 aa15.72■□□□□ 0.11
CLIP2-201ENST00000223398 LHX2P50458 406 aa15.72■□□□□ 0.11
CLIP2-201ENST00000223398 SAXO1Q8IYX7 474 aa15.72■□□□□ 0.11
CLIP2-201ENST00000223398 GPR146Q96CH1 333 aa15.72■□□□□ 0.11
CLIP2-201ENST00000223398 MARCH11A6NNE9 402 aa15.72■□□□□ 0.11
CLIP2-201ENST00000223398 AQP3Q92482 292 aa15.72■□□□□ 0.11
CLIP2-201ENST00000223398 RNASE6Q93091 150 aaKnown RBP15.72■□□□□ 0.11
CLIP2-201ENST00000223398 TMEM186Q96B77 213 aa15.72■□□□□ 0.11
CLIP2-201ENST00000223398 MFSD2BA6NFX1 497 aa15.72■□□□□ 0.11
CLIP2-201ENST00000223398 H3BTX0 84 aa15.72■□□□□ 0.11
CLIP2-201ENST00000223398 RGS13O14921 159 aa15.72■□□□□ 0.11
CLIP2-201ENST00000223398 RIGQ13278 110 aa15.72■□□□□ 0.11
CLIP2-201ENST00000223398 TBR1Q16650 682 aa15.72■□□□□ 0.11
CLIP2-201ENST00000223398 NTN3O00634 580 aaPredicted RBP15.72■□□□□ 0.11
CLIP2-201ENST00000223398 ZP3P21754 424 aa15.72■□□□□ 0.11
CLIP2-201ENST00000223398 OR4C13Q8NGP0 309 aa15.72■□□□□ 0.11
CLIP2-201ENST00000223398 SCGB1C2P0DMR2 95 aa15.71■□□□□ 0.11
CLIP2-201ENST00000223398 MUC1P15941 1255 aaPredicted RBP15.71■□□□□ 0.11
CLIP2-201ENST00000223398 NEU4Q8WWR8 484 aaPredicted RBP15.71■□□□□ 0.11
CLIP2-201ENST00000223398 DUX5Q96PT3 197 aa15.71■□□□□ 0.11
CLIP2-201ENST00000223398 A0A1W2PRX2 142 aa15.71■□□□□ 0.11
CLIP2-201ENST00000223398 LAMTOR1Q6IAA8 161 aa15.71■□□□□ 0.11
CLIP2-201ENST00000223398 SLC25A38Q96DW6 304 aa15.71■□□□□ 0.11
CLIP2-201ENST00000223398 OR5AC2Q9NZP5 309 aa15.71■□□□□ 0.11
CLIP2-201ENST00000223398 IGLV3-12A0A075B6K2 115 aa15.71■□□□□ 0.11
CLIP2-201ENST00000223398 PSG7Q13046 419 aa15.71■□□□□ 0.11
CLIP2-201ENST00000223398 ACP7Q6ZNF0 438 aa15.71■□□□□ 0.11
CLIP2-201ENST00000223398 OR2T10Q8NGZ9 312 aa15.71■□□□□ 0.11
CLIP2-201ENST00000223398 MRPL37Q9BZE1 423 aaKnown RBP15.71■□□□□ 0.11
CLIP2-201ENST00000223398 CORTO00230 105 aa15.71■□□□□ 0.11
CLIP2-201ENST00000223398 IGKV3-20P01619 116 aa15.71■□□□□ 0.11
CLIP2-201ENST00000223398 QTRT1Q9BXR0 403 aaKnown RBP15.71■□□□□ 0.11
CLIP2-201ENST00000223398 ZG16O60844 167 aa15.7■□□□□ 0.1
CLIP2-201ENST00000223398 MIC13Q5XKP0 118 aa15.7■□□□□ 0.1
CLIP2-201ENST00000223398 TEX50A0A1B0GTY4 177 aa15.7■□□□□ 0.1
CLIP2-201ENST00000223398 LYNX1G3V0Z9 82 aa15.7■□□□□ 0.1
CLIP2-201ENST00000223398 KLF7O75840 302 aaPredicted RBP15.7■□□□□ 0.1
CLIP2-201ENST00000223398 LYNX1P0DP58 116 aa15.7■□□□□ 0.1
CLIP2-201ENST00000223398 WDR73Q6P4I2 378 aa15.7■□□□□ 0.1
CLIP2-201ENST00000223398 MRPL30Q8TCC3 161 aaKnown RBP15.7■□□□□ 0.1
CLIP2-201ENST00000223398 DDB2Q92466 427 aa15.7■□□□□ 0.1
CLIP2-201ENST00000223398 EIF3GO75821 320 aaKnown RBP eCLIP15.7■□□□□ 0.1
CLIP2-201ENST00000223398 SLC35E4Q6ICL7 350 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms