RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 SIGMAR1Q99720 223 aa11.58□□□□□ -0.56
GABPB1-201ENST00000220429 PBOV1Q9GZY1 135 aa11.58□□□□□ -0.56
GABPB1-201ENST00000220429 GTSF1LQ9H1H1 148 aa11.58□□□□□ -0.56
GABPB1-201ENST00000220429 COL27A1Q8IZC6 1860 aaPredicted RBP11.57□□□□□ -0.56
GABPB1-201ENST00000220429 TMEM267Q0VDI3 215 aaPredicted RBP11.57□□□□□ -0.56
GABPB1-201ENST00000220429 Q0VG73 95 aa11.57□□□□□ -0.56
GABPB1-201ENST00000220429 C5orf64Q2M2E5 130 aa11.57□□□□□ -0.56
GABPB1-201ENST00000220429 PET117Q6UWS5 81 aa11.57□□□□□ -0.56
GABPB1-201ENST00000220429 C1orf210Q8IVY1 113 aa11.57□□□□□ -0.56
GABPB1-201ENST00000220429 POM121L2Q96KW2 1035 aa11.57□□□□□ -0.56
GABPB1-201ENST00000220429 WASHC3Q9Y3C0 194 aa11.57□□□□□ -0.56
GABPB1-201ENST00000220429 TRAV8-6A0A0B4J262 113 aa11.57□□□□□ -0.56
GABPB1-201ENST00000220429 HAND1O96004 215 aa11.57□□□□□ -0.56
GABPB1-201ENST00000220429 C3orf79P0CE67 100 aa11.57□□□□□ -0.56
GABPB1-201ENST00000220429 AMTP48728 403 aa11.57□□□□□ -0.56
GABPB1-201ENST00000220429 ADAT3Q96EY9 351 aaPredicted RBP11.57□□□□□ -0.56
GABPB1-201ENST00000220429 BANF2Q9H503 90 aa11.57□□□□□ -0.56
GABPB1-201ENST00000220429 POLR1DQ9Y2S0 133 aa11.57□□□□□ -0.56
GABPB1-201ENST00000220429 ZNF878C9JN71 531 aa11.56□□□□□ -0.56
GABPB1-201ENST00000220429 TNFSF12O43508 249 aa11.56□□□□□ -0.56
GABPB1-201ENST00000220429 VENTXO95231 258 aa11.56□□□□□ -0.56
GABPB1-201ENST00000220429 GLI4P10075 376 aa11.56□□□□□ -0.56
GABPB1-201ENST00000220429 SLC23A3Q6PIS1 610 aa11.56□□□□□ -0.56
GABPB1-201ENST00000220429 WDR82Q6UXN9 313 aa11.56□□□□□ -0.56
GABPB1-201ENST00000220429 OR8I2Q8N0Y5 310 aa11.56□□□□□ -0.56
GABPB1-201ENST00000220429 DEFB123Q8N688 67 aa11.56□□□□□ -0.56
GABPB1-201ENST00000220429 OR4P4Q8NGL7 312 aa11.56□□□□□ -0.56
GABPB1-201ENST00000220429 RTN4IP1Q8WWV3 396 aaPredicted RBP11.56□□□□□ -0.56
GABPB1-201ENST00000220429 LIN37Q96GY3 246 aaPredicted RBP11.56□□□□□ -0.56
GABPB1-201ENST00000220429 TM2D1Q9BX74 207 aa11.56□□□□□ -0.56
GABPB1-201ENST00000220429 VSIRQ9H7M9 311 aa11.56□□□□□ -0.56
GABPB1-201ENST00000220429 GAGE10A6NGK3 116 aa11.56□□□□□ -0.56
GABPB1-201ENST00000220429 SSSCA1O60232 199 aa11.56□□□□□ -0.56
GABPB1-201ENST00000220429 NRASP01111 189 aa11.56□□□□□ -0.56
GABPB1-201ENST00000220429 KRASP01116 189 aa11.56□□□□□ -0.56
GABPB1-201ENST00000220429 OR10J4P0C629 311 aa11.56□□□□□ -0.56
GABPB1-201ENST00000220429 NKX2-1P43699 371 aaPredicted RBP11.56□□□□□ -0.56
GABPB1-201ENST00000220429 ZNF83P51522 516 aa11.56□□□□□ -0.56
GABPB1-201ENST00000220429 PHYHD1Q5SRE7 291 aa11.56□□□□□ -0.56
GABPB1-201ENST00000220429 TSPO2Q5TGU0 170 aa11.56□□□□□ -0.56
GABPB1-201ENST00000220429 STUMQ69YW2 141 aa11.56□□□□□ -0.56
GABPB1-201ENST00000220429 SUMF1Q8NBK3 374 aa11.56□□□□□ -0.56
GABPB1-201ENST00000220429 MRPL30Q8TCC3 161 aaKnown RBP11.56□□□□□ -0.56
GABPB1-201ENST00000220429 SH2D2AQ9NP31 389 aa11.56□□□□□ -0.56
GABPB1-201ENST00000220429 PEF1Q9UBV8 284 aaKnown RBP11.56□□□□□ -0.56
GABPB1-201ENST00000220429 NCKAP5O14513 1909 aa11.56□□□□□ -0.56
GABPB1-201ENST00000220429 MYO7BQ6PIF6 2116 aa11.56□□□□□ -0.56
GABPB1-201ENST00000220429 LOC102725191A0A1B0GVB3 256 aa11.55□□□□□ -0.56
GABPB1-201ENST00000220429 FKBP2P26885 142 aaKnown RBP11.55□□□□□ -0.56
GABPB1-201ENST00000220429 SSR4P51571 173 aa11.55□□□□□ -0.56
GABPB1-201ENST00000220429 HTD2P86397 168 aa11.55□□□□□ -0.56
GABPB1-201ENST00000220429 TLE1Q04724 770 aa11.55□□□□□ -0.56
GABPB1-201ENST00000220429 PMCHL1Q16048 86 aa11.55□□□□□ -0.56
GABPB1-201ENST00000220429 ABCA11PQ4W5N1 156 aa11.55□□□□□ -0.56
GABPB1-201ENST00000220429 BVES-AS1Q5T3Y7 98 aa11.55□□□□□ -0.56
GABPB1-201ENST00000220429 GLIPR1L1Q6UWM5 242 aa11.55□□□□□ -0.56
GABPB1-201ENST00000220429 ODF3L1Q8IXM7 274 aa11.55□□□□□ -0.56
GABPB1-201ENST00000220429 OR2V2Q96R30 315 aa11.55□□□□□ -0.56
GABPB1-201ENST00000220429 TMEM59Q9BXS4 323 aa11.55□□□□□ -0.56
GABPB1-201ENST00000220429 PECRQ9BY49 303 aa11.55□□□□□ -0.56
GABPB1-201ENST00000220429 CHODLQ9H9P2 273 aa11.55□□□□□ -0.56
GABPB1-201ENST00000220429 DOCK10Q96BY6 2186 aa11.55□□□□□ -0.56
GABPB1-201ENST00000220429 M0R1X1 148 aa11.55□□□□□ -0.56
GABPB1-201ENST00000220429 LIFP15018 202 aa11.55□□□□□ -0.56
GABPB1-201ENST00000220429 CBLN1P23435 193 aa11.55□□□□□ -0.56
GABPB1-201ENST00000220429 CLDN17P56750 224 aa11.55□□□□□ -0.56
GABPB1-201ENST00000220429 ZNF154Q13106 437 aa11.55□□□□□ -0.56
GABPB1-201ENST00000220429 LPAL2Q16609 132 aa11.55□□□□□ -0.56
GABPB1-201ENST00000220429 CDCP2Q5VXM1 449 aa11.55□□□□□ -0.56
GABPB1-201ENST00000220429 SGMS2Q8NHU3 365 aa11.55□□□□□ -0.56
GABPB1-201ENST00000220429 OR51E1Q8TCB6 317 aa11.55□□□□□ -0.56
GABPB1-201ENST00000220429 MSI2Q96DH6 328 aaKnown RBP11.55□□□□□ -0.56
GABPB1-201ENST00000220429 MRPL18Q9H0U6 180 aaKnown RBP11.55□□□□□ -0.56
GABPB1-201ENST00000220429 PNRC2Q9NPJ4 139 aaKnown RBP11.55□□□□□ -0.56
GABPB1-201ENST00000220429 DECR2Q9NUI1 292 aa11.55□□□□□ -0.56
GABPB1-201ENST00000220429 SLC33A1O00400 549 aaPredicted RBP11.54□□□□□ -0.56
GABPB1-201ENST00000220429 RER1O15258 196 aa11.54□□□□□ -0.56
GABPB1-201ENST00000220429 ZIC3O60481 467 aa11.54□□□□□ -0.56
GABPB1-201ENST00000220429 NUDT3O95989 172 aa11.54□□□□□ -0.56
GABPB1-201ENST00000220429 ZNF16P17020 682 aaPredicted RBP11.54□□□□□ -0.56
GABPB1-201ENST00000220429 ZNF20P17024 532 aa11.54□□□□□ -0.56
GABPB1-201ENST00000220429 ZNF133P52736 654 aaPredicted RBP11.54□□□□□ -0.56
GABPB1-201ENST00000220429 RPS19BP1Q86WX3 136 aaKnown RBP11.54□□□□□ -0.56
GABPB1-201ENST00000220429 TRAV9-2A0A087WT02 112 aa11.54□□□□□ -0.56
GABPB1-201ENST00000220429 MUC21A0A0G2JKD1 596 aa11.54□□□□□ -0.56
GABPB1-201ENST00000220429 MUC21A0A140T8X8 626 aa11.54□□□□□ -0.56
GABPB1-201ENST00000220429 IFNA5P01569 189 aa11.54□□□□□ -0.56
GABPB1-201ENST00000220429 OPRM1P35372 400 aa11.54□□□□□ -0.56
GABPB1-201ENST00000220429 FOLR3P41439 243 aa11.54□□□□□ -0.56
GABPB1-201ENST00000220429 TESK1Q15569 626 aa11.54□□□□□ -0.56
GABPB1-201ENST00000220429 MUC21Q5SSG8 566 aa11.54□□□□□ -0.56
GABPB1-201ENST00000220429 PRAMEF5Q5TYX0 476 aa11.54□□□□□ -0.56
GABPB1-201ENST00000220429 PRAMEF6Q5VXH4 476 aa11.54□□□□□ -0.56
GABPB1-201ENST00000220429 MRPL21Q7Z2W9 205 aaKnown RBP11.54□□□□□ -0.56
GABPB1-201ENST00000220429 NEGR1Q7Z3B1 354 aa11.54□□□□□ -0.56
GABPB1-201ENST00000220429 ZNF286AQ9HBT8 521 aa11.54□□□□□ -0.56
GABPB1-201ENST00000220429 IGHV3-15A0A0B4J1V0 119 aa11.53□□□□□ -0.56
GABPB1-201ENST00000220429 C17orf112F2Z3M2 114 aa11.53□□□□□ -0.56
GABPB1-201ENST00000220429 PMCHP20382 165 aa11.53□□□□□ -0.56
GABPB1-201ENST00000220429 DSCR4P56555 118 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms