RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 KIF26BQ2KJY2 2108 aa16.12■□□□□ 0.17
MBD3-201ENST00000156825 SGMS2Q8NHU3 365 aa16.12■□□□□ 0.17
MBD3-201ENST00000156825 BDP1A6H8Y1 2624 aa16.12■□□□□ 0.17
MBD3-201ENST00000156825 SLC35E4Q6ICL7 350 aa16.11■□□□□ 0.17
MBD3-201ENST00000156825 FDX2Q6P4F2 183 aa16.11■□□□□ 0.17
MBD3-201ENST00000156825 RBPMS2Q6ZRY4 209 aaKnown RBP16.11■□□□□ 0.17
MBD3-201ENST00000156825 DOCK10Q96BY6 2186 aa16.11■□□□□ 0.17
MBD3-201ENST00000156825 PPIAL4CA0A0B4J2A2 164 aa16.11■□□□□ 0.17
MBD3-201ENST00000156825 PDE6DO43924 150 aa16.11■□□□□ 0.17
MBD3-201ENST00000156825 PPIAL4GP0DN37 164 aa16.11■□□□□ 0.17
MBD3-201ENST00000156825 KHDC3LQ587J8 217 aa16.11■□□□□ 0.17
MBD3-201ENST00000156825 DPPA3Q6W0C5 159 aa16.11■□□□□ 0.17
MBD3-201ENST00000156825 ANAPC16Q96DE5 110 aa16.11■□□□□ 0.17
MBD3-201ENST00000156825 SNRNP40Q96DI7 357 aaKnown RBP16.11■□□□□ 0.17
MBD3-201ENST00000156825 RALGAPA1Q6GYQ0 2036 aa16.11■□□□□ 0.17
MBD3-201ENST00000156825 LINC00862A6NCI5 91 aa16.11■□□□□ 0.17
MBD3-201ENST00000156825 MARCH11A6NNE9 402 aa16.11■□□□□ 0.17
MBD3-201ENST00000156825 HSPB1P04792 205 aaKnown RBP16.11■□□□□ 0.17
MBD3-201ENST00000156825 ACSF3Q4G176 576 aaPredicted RBP16.11■□□□□ 0.17
MBD3-201ENST00000156825 TMEM105Q8N8V8 129 aa16.11■□□□□ 0.17
MBD3-201ENST00000156825 PKIBQ9C010 78 aa16.11■□□□□ 0.17
MBD3-201ENST00000156825 ZDHHC8Q9ULC8 765 aa16.11■□□□□ 0.17
MBD3-201ENST00000156825 CREBBPQ92793 2442 aa16.11■□□□□ 0.17
MBD3-201ENST00000156825 OR2T8A6NH00 312 aa16.11■□□□□ 0.17
MBD3-201ENST00000156825 BCL2P10415 239 aa16.11■□□□□ 0.17
MBD3-201ENST00000156825 NPIPB9F8W1W9 429 aa16.1■□□□□ 0.17
MBD3-201ENST00000156825 PGA5P0DJD9 388 aa16.1■□□□□ 0.17
MBD3-201ENST00000156825 MFAP2P55001 183 aa16.1■□□□□ 0.17
MBD3-201ENST00000156825 GCSAMQ8N6F7 178 aa16.1■□□□□ 0.17
MBD3-201ENST00000156825 DIRC2Q96SL1 478 aa16.1■□□□□ 0.17
MBD3-201ENST00000156825 RTN4RQ9BZR6 473 aa16.1■□□□□ 0.17
MBD3-201ENST00000156825 IFI6P09912 130 aa16.1■□□□□ 0.17
MBD3-201ENST00000156825 MUC15Q8N387 334 aa16.1■□□□□ 0.17
MBD3-201ENST00000156825 NRIP2Q9BQI9 281 aa16.1■□□□□ 0.17
MBD3-201ENST00000156825 SIPA1L1O43166 1804 aa16.1■□□□□ 0.17
MBD3-201ENST00000156825 TMEM14DPA8MWL7 114 aa16.1■□□□□ 0.17
MBD3-201ENST00000156825 SELENOHQ8IZQ5 122 aaKnown RBP16.1■□□□□ 0.17
MBD3-201ENST00000156825 WNK2Q9Y3S1 2297 aa16.1■□□□□ 0.17
MBD3-201ENST00000156825 A0A087WV48 116 aa16.1■□□□□ 0.17
MBD3-201ENST00000156825 COX6B1P14854 86 aa16.1■□□□□ 0.17
MBD3-201ENST00000156825 FHITP49789 147 aa16.1■□□□□ 0.17
MBD3-201ENST00000156825 UNQ5815/PRO19632Q6UWF5 114 aa16.1■□□□□ 0.17
MBD3-201ENST00000156825 OR4A5Q8NH83 315 aa16.1■□□□□ 0.17
MBD3-201ENST00000156825 SH3BGRL3Q9H299 93 aa16.1■□□□□ 0.17
MBD3-201ENST00000156825 NPDC1Q9NQX5 325 aaPredicted RBP16.1■□□□□ 0.17
MBD3-201ENST00000156825 CRIPAKQ8N1N5 446 aa16.09■□□□□ 0.17
MBD3-201ENST00000156825 OR5AU1Q8NGC0 362 aa16.09■□□□□ 0.17
MBD3-201ENST00000156825 HKR1P10072 659 aa16.09■□□□□ 0.17
MBD3-201ENST00000156825 TMEM183BQ1AE95 376 aa16.09■□□□□ 0.17
MBD3-201ENST00000156825 Q6ZT83 130 aa16.09■□□□□ 0.17
MBD3-201ENST00000156825 C1orf174Q8IYL3 243 aa16.09■□□□□ 0.17
MBD3-201ENST00000156825 IDI2-AS1Q9NZ38 188 aa16.09■□□□□ 0.17
MBD3-201ENST00000156825 A1L4Q6 167 aa16.09■□□□□ 0.17
MBD3-201ENST00000156825 SMPD2O60906 423 aa16.09■□□□□ 0.17
MBD3-201ENST00000156825 OR2A4O95047 310 aa16.09■□□□□ 0.17
MBD3-201ENST00000156825 HIST1H1BP16401 226 aaKnown RBP16.09■□□□□ 0.17
MBD3-201ENST00000156825 ATP5J2P56134 94 aa16.09■□□□□ 0.17
MBD3-201ENST00000156825 TMEM54Q969K7 222 aa16.09■□□□□ 0.17
MBD3-201ENST00000156825 ABHD17AQ96GS6 310 aa16.09■□□□□ 0.17
MBD3-201ENST00000156825 OR2A7Q96R45 310 aa16.09■□□□□ 0.17
MBD3-201ENST00000156825 LOC389332A0A1B0GUA5 103 aa16.09■□□□□ 0.17
MBD3-201ENST00000156825 STPG2Q8N412 459 aa16.09■□□□□ 0.17
MBD3-201ENST00000156825 STXBP6Q8NFX7 210 aa16.09■□□□□ 0.17
MBD3-201ENST00000156825 C10orf128Q5T292 105 aa16.08■□□□□ 0.17
MBD3-201ENST00000156825 CALHM1Q8IU99 346 aa16.08■□□□□ 0.17
MBD3-201ENST00000156825 SHISA5Q8N114 240 aa16.08■□□□□ 0.17
MBD3-201ENST00000156825 PACRGQ96M98 296 aaPredicted RBP16.08■□□□□ 0.17
MBD3-201ENST00000156825 SULT1A2P50226 295 aa16.08■□□□□ 0.17
MBD3-201ENST00000156825 FAM3BP58499 235 aaPredicted RBP16.08■□□□□ 0.17
MBD3-201ENST00000156825 H1FOOQ8IZA3 346 aaPredicted RBP16.08■□□□□ 0.17
MBD3-201ENST00000156825 TCTEX1D1Q8N7M0 179 aa16.08■□□□□ 0.17
MBD3-201ENST00000156825 IL19Q9UHD0 177 aa16.08■□□□□ 0.17
MBD3-201ENST00000156825 IGHV3OR16-13A0A075B7E8 117 aa16.08■□□□□ 0.16
MBD3-201ENST00000156825 IGHV3-74A0A0B4J1X5 117 aa16.08■□□□□ 0.16
MBD3-201ENST00000156825 CECR9P0C854 216 aa16.08■□□□□ 0.16
MBD3-201ENST00000156825 MC5RP33032 325 aa16.08■□□□□ 0.16
MBD3-201ENST00000156825 CSRP2Q16527 193 aa16.08■□□□□ 0.16
MBD3-201ENST00000156825 OR8A1Q8NGG7 326 aa16.08■□□□□ 0.16
MBD3-201ENST00000156825 TUBD1Q9UJT1 453 aa16.08■□□□□ 0.16
MBD3-201ENST00000156825 SYNGR3O43761 229 aa16.08■□□□□ 0.16
MBD3-201ENST00000156825 UMODP07911 640 aa16.08■□□□□ 0.16
MBD3-201ENST00000156825 SERF2P84101 59 aa16.08■□□□□ 0.16
MBD3-201ENST00000156825 RIGQ13278 110 aa16.08■□□□□ 0.16
MBD3-201ENST00000156825 PEAR1Q5VY43 1037 aaPredicted RBP16.08■□□□□ 0.16
MBD3-201ENST00000156825 TAF15Q92804 592 aaKnown RBP eCLIP16.08■□□□□ 0.16
MBD3-201ENST00000156825 CD81P60033 236 aa16.08■□□□□ 0.16
MBD3-201ENST00000156825 SPANXN1Q5VSR9 72 aa16.08■□□□□ 0.16
MBD3-201ENST00000156825 ASPHD2Q6ICH7 369 aa16.08■□□□□ 0.16
MBD3-201ENST00000156825 PCNX1Q96RV3 2341 aa16.07■□□□□ 0.16
MBD3-201ENST00000156825 RGPD3A6NKT7 1758 aaPredicted RBP16.07■□□□□ 0.16
MBD3-201ENST00000156825 RPL39P5Q59GN2 51 aa16.07■□□□□ 0.16
MBD3-201ENST00000156825 DRAM1Q8N682 238 aa16.07■□□□□ 0.16
MBD3-201ENST00000156825 AUP1Q9Y679 476 aa16.07■□□□□ 0.16
MBD3-201ENST00000156825 PRB3Q04118 309 aaPredicted RBP16.07■□□□□ 0.16
MBD3-201ENST00000156825 PNKDQ8N490 385 aa16.07■□□□□ 0.16
MBD3-201ENST00000156825 DCTN5Q9BTE1 182 aa16.07■□□□□ 0.16
MBD3-201ENST00000156825 IGKV3D-15A0A087WSY6 115 aa16.07■□□□□ 0.16
MBD3-201ENST00000156825 IGKV3-15P01624 115 aa16.07■□□□□ 0.16
MBD3-201ENST00000156825 FAM106CPP0CH98 169 aa16.07■□□□□ 0.16
MBD3-201ENST00000156825 POM121Q96HA1 1249 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms