RNA–Protein interactions for RNA: ENST00000640769.1

RTTN-222, Transcript of rotatin, human

APPRIS P1 TSL 2 BASIC

Gene RTTN, Length 8,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-222	ENST00000640769	CDK2AP2	O75956	126 aa		7.54	□□□□□ -1.2
RTTN-222	ENST00000640769	CLLU1OS	Q5K130	101 aa		7.54	□□□□□ -1.2
RTTN-222	ENST00000640769	DCAF10	Q5QP82	559 aa		7.54	□□□□□ -1.2
RTTN-222	ENST00000640769	C6orf15	Q6UXA7	325 aa	Predicted RBP	7.54	□□□□□ -1.2
RTTN-222	ENST00000640769	BOD1L2	Q8IYS8	172 aa		7.54	□□□□□ -1.2
RTTN-222	ENST00000640769	MZB1	Q8WU39	189 aa		7.54	□□□□□ -1.2
RTTN-222	ENST00000640769	ST8SIA1	Q92185	356 aa		7.54	□□□□□ -1.2
RTTN-222	ENST00000640769	ZIC3	O60481	467 aa		7.53	□□□□□ -1.2
RTTN-222	ENST00000640769	NMB	P08949	121 aa		7.53	□□□□□ -1.2
RTTN-222	ENST00000640769	EFNB2	P52799	333 aa		7.53	□□□□□ -1.2
RTTN-222	ENST00000640769	TNFRSF1A	P19438	455 aa		7.53	□□□□□ -1.2
RTTN-222	ENST00000640769	CD33	P20138	364 aa		7.53	□□□□□ -1.2
RTTN-222	ENST00000640769	TMPRSS3	P57727	454 aa		7.53	□□□□□ -1.2
RTTN-222	ENST00000640769	HSPE1	P61604	102 aa	Known RBP	7.53	□□□□□ -1.2
RTTN-222	ENST00000640769	VKORC1L1	Q8N0U8	176 aa		7.53	□□□□□ -1.2
RTTN-222	ENST00000640769	C4orf45	Q96LM5	186 aa		7.53	□□□□□ -1.2
RTTN-222	ENST00000640769		R4GN57	208 aa		7.53	□□□□□ -1.2
RTTN-222	ENST00000640769	TRBV9	A0A0B4J1U6	114 aa		7.53	□□□□□ -1.2
RTTN-222	ENST00000640769	FGF9	P31371	208 aa	Predicted RBP	7.53	□□□□□ -1.2
RTTN-222	ENST00000640769	ZNF660	Q6AZW8	331 aa	Predicted RBP	7.53	□□□□□ -1.2
RTTN-222	ENST00000640769	MRGPRX4	Q96LA9	322 aa		7.53	□□□□□ -1.2
RTTN-222	ENST00000640769	KIR3DX1	Q9H7L2	352 aa		7.53	□□□□□ -1.2
RTTN-222	ENST00000640769		A0A1W2PRS3	328 aa		7.53	□□□□□ -1.2
RTTN-222	ENST00000640769		K7EQS6	105 aa		7.53	□□□□□ -1.2
RTTN-222	ENST00000640769	FDCSP	Q8NFU4	85 aa		7.53	□□□□□ -1.2
RTTN-222	ENST00000640769	PTGES	O14684	152 aa		7.53	□□□□□ -1.2
RTTN-222	ENST00000640769	NDUFS6	O75380	124 aa	Known RBP	7.53	□□□□□ -1.2
RTTN-222	ENST00000640769	PATE1	Q8WXA2	126 aa		7.53	□□□□□ -1.2
RTTN-222	ENST00000640769	ZNF625	Q96I27	306 aa	Predicted RBP	7.53	□□□□□ -1.2
RTTN-222	ENST00000640769	SLC26A1	Q9H2B4	701 aa		7.53	□□□□□ -1.2
RTTN-222	ENST00000640769	KLK13	Q9UKR3	277 aa		7.53	□□□□□ -1.2
RTTN-222	ENST00000640769	EGR1	P18146	543 aa		7.53	□□□□□ -1.2
RTTN-222	ENST00000640769	LEP	P41159	167 aa		7.53	□□□□□ -1.2
RTTN-222	ENST00000640769	ADAMTSL4	Q6UY14	1074 aa		7.53	□□□□□ -1.2
RTTN-222	ENST00000640769	ZBP1	Q9H171	429 aa		7.53	□□□□□ -1.2
RTTN-222	ENST00000640769	BRWD1	Q9NSI6	2320 aa		7.53	□□□□□ -1.2
RTTN-222	ENST00000640769	REG1A	P05451	166 aa		7.53	□□□□□ -1.2
RTTN-222	ENST00000640769	GLRX	P35754	106 aa		7.53	□□□□□ -1.2
RTTN-222	ENST00000640769	SUMO4	Q6EEV6	95 aa		7.53	□□□□□ -1.2
RTTN-222	ENST00000640769	C10orf111	Q8N326	155 aa		7.53	□□□□□ -1.2
RTTN-222	ENST00000640769	SHISA7	A6NL88	538 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769		C9JCJ5	164 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	SUMO3	P55854	103 aa	Predicted RBP	7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	COL10A1	Q03692	680 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	DEFB109B	Q30KR1	87 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	C5orf47	Q569G3	176 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	MIC13	Q5XKP0	118 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	GATD1	Q8NB37	220 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	ZNF714	Q96N38	554 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	CISD1	Q9NZ45	108 aa	Known RBP	7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	SNED1	Q8TER0	1413 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	GGTLC3	B5MD39	225 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	DHH	O43323	396 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	NCR2	O95944	276 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	PSG1	P11464	419 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	VDAC1	P21796	283 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	RND3	P61587	244 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	NXT2	Q9NPJ8	142 aa	Known RBP	7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	LSM4	Q9Y4Z0	139 aa	Known RBP	7.52	□□□□□ -1.21
RTTN-222	ENST00000640769		A0A0U1RRA0	63 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	PRB1	P04280	392 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	FGF5	P12034	268 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	CEACAM3	P40198	252 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	NAAA	Q02083	359 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	HCP5	Q6MZN7	132 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	SLC37A2	Q8TED4	501 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	TBC1D29	Q9UFV1	150 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	CCL26	Q9Y258	94 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	BCL9L	Q86UU0	1499 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	NACA	E9PAV3	2078 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	TDGF1	P13385	188 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	ZNF32	P17041	273 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	CENPW	Q5EE01	88 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	OR52E5	Q8NH55	327 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	SMDT1	Q9H4I9	107 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	PRND	Q9UKY0	176 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	GPX1	P07203	203 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	CXCL12	P48061	93 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	ACSF3	Q4G176	576 aa	Predicted RBP	7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	SVIP	Q8NHG7	77 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	DDB2	Q92466	427 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	CXXC4	Q9H2H0	198 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	LINC00869	P0C866	280 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	NPVF	Q9HCQ7	196 aa		7.52	□□□□□ -1.21
RTTN-222	ENST00000640769	METRNL	Q641Q3	311 aa		7.51	□□□□□ -1.21
RTTN-222	ENST00000640769	TMEM250	H0YL14	139 aa		7.51	□□□□□ -1.21
RTTN-222	ENST00000640769	MAL	P21145	153 aa		7.51	□□□□□ -1.21
RTTN-222	ENST00000640769	GAL	P22466	123 aa		7.51	□□□□□ -1.21
RTTN-222	ENST00000640769	MMD2	Q8IY49	270 aa		7.51	□□□□□ -1.21
RTTN-222	ENST00000640769	VSTM2A	Q8TAG5	236 aa		7.51	□□□□□ -1.21
RTTN-222	ENST00000640769	JMJD8	Q96S16	334 aa		7.51	□□□□□ -1.21
RTTN-222	ENST00000640769	VKORC1	Q9BQB6	163 aa		7.51	□□□□□ -1.21
RTTN-222	ENST00000640769	HDGFL3	Q9Y3E1	203 aa		7.51	□□□□□ -1.21
RTTN-222	ENST00000640769	TMEM56-RWDD3	S4R434	201 aa		7.51	□□□□□ -1.21
RTTN-222	ENST00000640769	PLA2G10	O15496	165 aa		7.51	□□□□□ -1.21
RTTN-222	ENST00000640769	SYNGR3	O43761	229 aa		7.51	□□□□□ -1.21
RTTN-222	ENST00000640769	IGHV3-48	P01763	117 aa		7.51	□□□□□ -1.21
RTTN-222	ENST00000640769	G6PC2	Q9NQR9	355 aa		7.51	□□□□□ -1.21
RTTN-222	ENST00000640769	POLR2A	P24928	1970 aa	Known RBP	7.51	□□□□□ -1.21
RTTN-222	ENST00000640769	ZNF729	A6NN14	1252 aa	Predicted RBP	7.51	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms