RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 HABP2Q14520 560 aaPredicted RBP10.58□□□□□ -0.72
GTF3A-209ENST00000640289 PYDC2Q56P42 97 aa10.58□□□□□ -0.72
GTF3A-209ENST00000640289 FAM71F2Q6NXP2 309 aa10.58□□□□□ -0.72
GTF3A-209ENST00000640289 DRAXINQ8NBI3 349 aaPredicted RBP10.58□□□□□ -0.72
GTF3A-209ENST00000640289 FAM216AQ8WUB2 273 aa10.58□□□□□ -0.72
GTF3A-209ENST00000640289 ZNF2Q9BSG1 426 aaPredicted RBP10.58□□□□□ -0.72
GTF3A-209ENST00000640289 GHITMQ9H3K2 345 aa10.58□□□□□ -0.72
GTF3A-209ENST00000640289 GSTZ1O43708 216 aaPredicted RBP10.57□□□□□ -0.72
GTF3A-209ENST00000640289 PPYP01298 95 aa10.57□□□□□ -0.72
GTF3A-209ENST00000640289 ETV6P41212 452 aa10.57□□□□□ -0.72
GTF3A-209ENST00000640289 FXYD4P59646 89 aa10.57□□□□□ -0.72
GTF3A-209ENST00000640289 LSAMPQ13449 338 aa10.57□□□□□ -0.72
GTF3A-209ENST00000640289 HES1Q14469 280 aa10.57□□□□□ -0.72
GTF3A-209ENST00000640289 HNF4GQ14541 408 aa10.57□□□□□ -0.72
GTF3A-209ENST00000640289 SPANXN2Q5MJ10 180 aa10.57□□□□□ -0.72
GTF3A-209ENST00000640289 ZNF660Q6AZW8 331 aaPredicted RBP10.57□□□□□ -0.72
GTF3A-209ENST00000640289 ZFAND2BQ8WV99 257 aa10.57□□□□□ -0.72
GTF3A-209ENST00000640289 SECTM1Q8WVN6 248 aa10.57□□□□□ -0.72
GTF3A-209ENST00000640289 GIMAP1Q8WWP7 306 aa10.57□□□□□ -0.72
GTF3A-209ENST00000640289 TINAGL1Q9GZM7 467 aaPredicted RBP10.57□□□□□ -0.72
GTF3A-209ENST00000640289 RBMX2Q9Y388 322 aaKnown RBP10.57□□□□□ -0.72
GTF3A-209ENST00000640289 NIPBLQ6KC79 2804 aaeCLIP10.57□□□□□ -0.72
GTF3A-209ENST00000640289 M0R1X1 148 aa10.56□□□□□ -0.72
GTF3A-209ENST00000640289 IGLV2-14P01704 120 aa10.56□□□□□ -0.72
GTF3A-209ENST00000640289 FAM106CPP0CH98 169 aa10.56□□□□□ -0.72
GTF3A-209ENST00000640289 TMEM11P17152 192 aa10.56□□□□□ -0.72
GTF3A-209ENST00000640289 CD1BP29016 333 aa10.56□□□□□ -0.72
GTF3A-209ENST00000640289 TAS2R19P59542 299 aa10.56□□□□□ -0.72
GTF3A-209ENST00000640289 SSBP1Q04837 148 aaKnown RBP10.56□□□□□ -0.72
GTF3A-209ENST00000640289 FAAP20Q6NZ36 180 aa10.56□□□□□ -0.72
GTF3A-209ENST00000640289 DHRS11Q6UWP2 260 aa10.56□□□□□ -0.72
GTF3A-209ENST00000640289 TMEM17Q86X19 198 aa10.56□□□□□ -0.72
GTF3A-209ENST00000640289 THNSL2Q86YJ6 484 aa10.56□□□□□ -0.72
GTF3A-209ENST00000640289 ZNF645Q8N7E2 425 aa10.56□□□□□ -0.72
GTF3A-209ENST00000640289 ZNF383Q8NA42 475 aa10.56□□□□□ -0.72
GTF3A-209ENST00000640289 TMEM229BQ8NBD8 167 aa10.56□□□□□ -0.72
GTF3A-209ENST00000640289 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.56□□□□□ -0.72
GTF3A-209ENST00000640289 OR4D10Q8NGI6 311 aa10.56□□□□□ -0.72
GTF3A-209ENST00000640289 EAF1Q96JC9 268 aaPredicted RBP10.56□□□□□ -0.72
GTF3A-209ENST00000640289 THAP7Q9BT49 309 aaPredicted RBP10.56□□□□□ -0.72
GTF3A-209ENST00000640289 SRRQ9GZT4 340 aa10.56□□□□□ -0.72
GTF3A-209ENST00000640289 CCL28Q9NRJ3 127 aa10.56□□□□□ -0.72
GTF3A-209ENST00000640289 PITPNC1Q9UKF7 332 aa10.56□□□□□ -0.72
GTF3A-209ENST00000640289 GAB2Q9UQC2 676 aa10.56□□□□□ -0.72
GTF3A-209ENST00000640289 SETD2Q9BYW2 2564 aaPredicted RBP10.56□□□□□ -0.72
GTF3A-209ENST00000640289 CD74P04233 296 aa10.55□□□□□ -0.72
GTF3A-209ENST00000640289 CSF1P09603 554 aa10.55□□□□□ -0.72
GTF3A-209ENST00000640289 PTBP1P26599 531 aaKnown RBP eCLIP10.55□□□□□ -0.72
GTF3A-209ENST00000640289 TSPAN5P62079 268 aa10.55□□□□□ -0.72
GTF3A-209ENST00000640289 RELBQ01201 579 aa10.55□□□□□ -0.72
GTF3A-209ENST00000640289 EBI3Q14213 229 aa10.55□□□□□ -0.72
GTF3A-209ENST00000640289 ACTBL2Q562R1 376 aa10.55□□□□□ -0.72
GTF3A-209ENST00000640289 RNASE10Q5GAN6 216 aaKnown RBP10.55□□□□□ -0.72
GTF3A-209ENST00000640289 VAX1Q5SQQ9 334 aa10.55□□□□□ -0.72
GTF3A-209ENST00000640289 DHRS7BQ6IAN0 325 aaPredicted RBP10.55□□□□□ -0.72
GTF3A-209ENST00000640289 LIAT1Q6ZQX7 453 aa10.55□□□□□ -0.72
GTF3A-209ENST00000640289 Q8N402 240 aa10.55□□□□□ -0.72
GTF3A-209ENST00000640289 OR6F1Q8NGZ6 308 aa10.55□□□□□ -0.72
GTF3A-209ENST00000640289 SLC25A33Q9BSK2 321 aa10.55□□□□□ -0.72
GTF3A-209ENST00000640289 C19orf24Q9BVV8 132 aa10.55□□□□□ -0.72
GTF3A-209ENST00000640289 SLC5A7Q9GZV3 580 aa10.55□□□□□ -0.72
GTF3A-209ENST00000640289 FXYD6Q9H0Q3 95 aa10.55□□□□□ -0.72
GTF3A-209ENST00000640289 PTTG2Q9NZH5 202 aa10.55□□□□□ -0.72
GTF3A-209ENST00000640289 C1RLQ9NZP8 487 aa10.55□□□□□ -0.72
GTF3A-209ENST00000640289 OR5H14A6NHG9 310 aa10.54□□□□□ -0.72
GTF3A-209ENST00000640289 LINC00473A8K010 186 aa10.54□□□□□ -0.72
GTF3A-209ENST00000640289 RNF212BA8MTL3 300 aa10.54□□□□□ -0.72
GTF3A-209ENST00000640289 H0YJW9 148 aa10.54□□□□□ -0.72
GTF3A-209ENST00000640289 OR2F2O95006 317 aa10.54□□□□□ -0.72
GTF3A-209ENST00000640289 RAB3DO95716 219 aa10.54□□□□□ -0.72
GTF3A-209ENST00000640289 MOSP00540 346 aa10.54□□□□□ -0.72
GTF3A-209ENST00000640289 CRYBA1P05813 215 aa10.54□□□□□ -0.72
GTF3A-209ENST00000640289 HERV-K104P61576 105 aa10.54□□□□□ -0.72
GTF3A-209ENST00000640289 STEAP1BQ6NZ63 245 aa10.54□□□□□ -0.72
GTF3A-209ENST00000640289 ZNF818PQ6ZRF7 136 aa10.54□□□□□ -0.72
GTF3A-209ENST00000640289 Q6ZSV7 163 aa10.54□□□□□ -0.72
GTF3A-209ENST00000640289 Q8N6K4 173 aa10.54□□□□□ -0.72
GTF3A-209ENST00000640289 OR2T10Q8NGZ9 312 aa10.54□□□□□ -0.72
GTF3A-209ENST00000640289 TMEM158Q8WZ71 300 aa10.54□□□□□ -0.72
GTF3A-209ENST00000640289 TRIM63Q969Q1 353 aa10.54□□□□□ -0.72
GTF3A-209ENST00000640289 MOB3AQ96BX8 217 aa10.54□□□□□ -0.72
GTF3A-209ENST00000640289 RITA1Q96K30 269 aa10.54□□□□□ -0.72
GTF3A-209ENST00000640289 RBM14Q96PK6 669 aaKnown RBP10.54□□□□□ -0.72
GTF3A-209ENST00000640289 GPHA2Q96T91 129 aa10.54□□□□□ -0.72
GTF3A-209ENST00000640289 SDHCQ99643 169 aaPredicted RBP10.54□□□□□ -0.72
GTF3A-209ENST00000640289 MDFIQ99750 246 aa10.54□□□□□ -0.72
GTF3A-209ENST00000640289 ZNF107Q9UII5 783 aaPredicted RBP10.54□□□□□ -0.72
GTF3A-209ENST00000640289 JMJD1CQ15652 2540 aa10.54□□□□□ -0.72
GTF3A-209ENST00000640289 ANKRD20A5PA0PJZ0 165 aa10.53□□□□□ -0.72
GTF3A-209ENST00000640289 SH2D7A6NKC9 451 aaPredicted RBP10.53□□□□□ -0.72
GTF3A-209ENST00000640289 TNFSF12O43508 249 aa10.53□□□□□ -0.72
GTF3A-209ENST00000640289 AMY2AP04746 511 aa10.53□□□□□ -0.72
GTF3A-209ENST00000640289 IFNA6P05013 189 aa10.53□□□□□ -0.72
GTF3A-209ENST00000640289 ZNF735P0CB33 412 aa10.53□□□□□ -0.72
GTF3A-209ENST00000640289 HKR1P10072 659 aa10.53□□□□□ -0.72
GTF3A-209ENST00000640289 TBPP20226 339 aa10.53□□□□□ -0.72
GTF3A-209ENST00000640289 CNTFRP26992 372 aa10.53□□□□□ -0.72
GTF3A-209ENST00000640289 DUTP33316 252 aaKnown RBP10.53□□□□□ -0.72
GTF3A-209ENST00000640289 RPL15P61313 204 aaKnown RBP10.53□□□□□ -0.72
GTF3A-209ENST00000640289 RPL30P62888 115 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms