RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 OR10A7Q8NGE5 316 aa12.35□□□□□ -0.43
SCARB2-216ENST00000639300 RTBDNQ9BSG5 229 aaPredicted RBP12.35□□□□□ -0.43
SCARB2-216ENST00000639300 ZNF703Q9H7S9 590 aaPredicted RBP12.35□□□□□ -0.43
SCARB2-216ENST00000639300 ZNF98A6NK75 572 aa12.34□□□□□ -0.43
SCARB2-216ENST00000639300 WNT9BO14905 357 aa12.34□□□□□ -0.43
SCARB2-216ENST00000639300 BCL2P10415 239 aa12.34□□□□□ -0.43
SCARB2-216ENST00000639300 CD82P27701 267 aa12.34□□□□□ -0.43
SCARB2-216ENST00000639300 OR5I1Q13606 314 aa12.34□□□□□ -0.43
SCARB2-216ENST00000639300 H1FOOQ8IZA3 346 aaPredicted RBP12.34□□□□□ -0.43
SCARB2-216ENST00000639300 OR8G5Q8NG78 346 aa12.34□□□□□ -0.43
SCARB2-216ENST00000639300 IL22RA2Q969J5 263 aa12.34□□□□□ -0.43
SCARB2-216ENST00000639300 MS4A10Q96PG2 267 aa12.34□□□□□ -0.43
SCARB2-216ENST00000639300 FBP1P09467 338 aa12.34□□□□□ -0.43
SCARB2-216ENST00000639300 CD1BP29016 333 aa12.34□□□□□ -0.43
SCARB2-216ENST00000639300 SERF2P84101 59 aa12.34□□□□□ -0.43
SCARB2-216ENST00000639300 VSTM2AQ8TAG5 236 aa12.34□□□□□ -0.43
SCARB2-216ENST00000639300 PKIBQ9C010 78 aa12.34□□□□□ -0.43
SCARB2-216ENST00000639300 IGHV3-21A0A0B4J1V1 117 aa12.34□□□□□ -0.43
SCARB2-216ENST00000639300 KCNMB1Q16558 191 aa12.34□□□□□ -0.43
SCARB2-216ENST00000639300 FLYWCH2Q96CP2 140 aaKnown RBP12.34□□□□□ -0.43
SCARB2-216ENST00000639300 MANBALQ9NQG1 85 aa12.34□□□□□ -0.43
SCARB2-216ENST00000639300 NPTNQ9Y639 398 aa12.34□□□□□ -0.43
SCARB2-216ENST00000639300 WDR87Q6ZQQ6 2873 aa12.34□□□□□ -0.43
SCARB2-216ENST00000639300 PLXNA3P51805 1871 aa12.34□□□□□ -0.43
SCARB2-216ENST00000639300 SEC14L6B5MCN3 397 aa12.33□□□□□ -0.43
SCARB2-216ENST00000639300 PRRX1P54821 245 aa12.33□□□□□ -0.43
SCARB2-216ENST00000639300 ARL16Q0P5N6 197 aa12.33□□□□□ -0.43
SCARB2-216ENST00000639300 LY6G6FQ5SQ64 297 aa12.33□□□□□ -0.43
SCARB2-216ENST00000639300 SEBOXQ9HB31 216 aaPredicted RBP12.33□□□□□ -0.43
SCARB2-216ENST00000639300 FUT9Q9Y231 359 aa12.33□□□□□ -0.43
SCARB2-216ENST00000639300 KLF7O75840 302 aaPredicted RBP12.33□□□□□ -0.44
SCARB2-216ENST00000639300 ATRAIDQ6UW56 229 aa12.33□□□□□ -0.44
SCARB2-216ENST00000639300 BCL2L2Q92843 193 aaPredicted RBP12.33□□□□□ -0.44
SCARB2-216ENST00000639300 LYRM2Q9NU23 88 aaPredicted RBP12.33□□□□□ -0.44
SCARB2-216ENST00000639300 SPG11Q96JI7 2443 aa12.33□□□□□ -0.44
SCARB2-216ENST00000639300 SCN8AQ9UQD0 1980 aa12.33□□□□□ -0.44
SCARB2-216ENST00000639300 ODAMA1E959 279 aa12.33□□□□□ -0.44
SCARB2-216ENST00000639300 AHRRA9YTQ3 701 aa12.33□□□□□ -0.44
SCARB2-216ENST00000639300 PROB1E7EW31 1015 aa12.33□□□□□ -0.44
SCARB2-216ENST00000639300 COX5BP10606 129 aa12.33□□□□□ -0.44
SCARB2-216ENST00000639300 Q56UQ5 140 aa12.33□□□□□ -0.44
SCARB2-216ENST00000639300 SLC25A53Q5H9E4 307 aa12.33□□□□□ -0.44
SCARB2-216ENST00000639300 OR1B1Q8NGR6 318 aa12.33□□□□□ -0.44
SCARB2-216ENST00000639300 LOXL4Q96JB6 756 aa12.33□□□□□ -0.44
SCARB2-216ENST00000639300 TECRQ9NZ01 308 aaKnown RBP12.33□□□□□ -0.44
SCARB2-216ENST00000639300 IGHV3-72A0A0B4J1Y9 119 aa12.33□□□□□ -0.44
SCARB2-216ENST00000639300 GATCO43716 136 aaKnown RBP12.33□□□□□ -0.44
SCARB2-216ENST00000639300 RND3P61587 244 aa12.33□□□□□ -0.44
SCARB2-216ENST00000639300 LYZP61626 148 aa12.33□□□□□ -0.44
SCARB2-216ENST00000639300 DHRS7BQ6IAN0 325 aaPredicted RBP12.33□□□□□ -0.44
SCARB2-216ENST00000639300 MS4A5Q9H3V2 200 aa12.33□□□□□ -0.44
SCARB2-216ENST00000639300 MIOXQ9UGB7 285 aa12.33□□□□□ -0.44
SCARB2-216ENST00000639300 INSIG2Q9Y5U4 225 aa12.33□□□□□ -0.44
SCARB2-216ENST00000639300 PRR19A6NJB7 356 aa12.32□□□□□ -0.44
SCARB2-216ENST00000639300 TPPP2P59282 170 aa12.32□□□□□ -0.44
SCARB2-216ENST00000639300 KHDC1LQ5JSQ8 128 aa12.32□□□□□ -0.44
SCARB2-216ENST00000639300 TEPPQ6URK8 271 aa12.32□□□□□ -0.44
SCARB2-216ENST00000639300 TAF15Q92804 592 aaKnown RBP eCLIP12.32□□□□□ -0.44
SCARB2-216ENST00000639300 CHRDL1Q9BU40 450 aa12.32□□□□□ -0.44
SCARB2-216ENST00000639300 TM2D1Q9BX74 207 aa12.32□□□□□ -0.44
SCARB2-216ENST00000639300 SSTR5P35346 364 aa12.32□□□□□ -0.44
SCARB2-216ENST00000639300 C17orf82Q86X59 251 aaPredicted RBP12.32□□□□□ -0.44
SCARB2-216ENST00000639300 RBKSQ9H477 322 aa12.32□□□□□ -0.44
SCARB2-216ENST00000639300 DEPPQ9NTK1 212 aa12.32□□□□□ -0.44
SCARB2-216ENST00000639300 PRNDQ9UKY0 176 aa12.32□□□□□ -0.44
SCARB2-216ENST00000639300 ARL2-SNX15V9GYD0 113 aa12.32□□□□□ -0.44
SCARB2-216ENST00000639300 DRAM1Q8N682 238 aa12.32□□□□□ -0.44
SCARB2-216ENST00000639300 NLRC5Q86WI3 1866 aa12.32□□□□□ -0.44
SCARB2-216ENST00000639300 RAB29O14966 203 aa12.32□□□□□ -0.44
SCARB2-216ENST00000639300 ZG16O60844 167 aa12.32□□□□□ -0.44
SCARB2-216ENST00000639300 HPRT1P00492 218 aa12.32□□□□□ -0.44
SCARB2-216ENST00000639300 NAT2P11245 290 aa12.32□□□□□ -0.44
SCARB2-216ENST00000639300 SUMO1P63165 101 aaKnown RBP12.32□□□□□ -0.44
SCARB2-216ENST00000639300 RAB1CQ92928 201 aa12.32□□□□□ -0.44
SCARB2-216ENST00000639300 VOPP1Q96AW1 172 aa12.32□□□□□ -0.44
SCARB2-216ENST00000639300 SLC25A10Q9UBX3 287 aaPredicted RBP12.32□□□□□ -0.44
SCARB2-216ENST00000639300 UCP3P55916 312 aa12.31□□□□□ -0.44
SCARB2-216ENST00000639300 OR5P3Q8WZ94 311 aa12.31□□□□□ -0.44
SCARB2-216ENST00000639300 LYZL4Q96KX0 146 aa12.31□□□□□ -0.44
SCARB2-216ENST00000639300 NDFIP1Q9BT67 221 aa12.31□□□□□ -0.44
SCARB2-216ENST00000639300 B4DEV8 164 aa12.31□□□□□ -0.44
SCARB2-216ENST00000639300 SLC31A2O15432 143 aa12.31□□□□□ -0.44
SCARB2-216ENST00000639300 S1PR2O95136 353 aa12.31□□□□□ -0.44
SCARB2-216ENST00000639300 HOXD4P09016 255 aaPredicted RBP12.31□□□□□ -0.44
SCARB2-216ENST00000639300 ACP1P24666 158 aa12.31□□□□□ -0.44
SCARB2-216ENST00000639300 PLAURQ03405 335 aa12.31□□□□□ -0.44
SCARB2-216ENST00000639300 SAXO1Q8IYX7 474 aa12.31□□□□□ -0.44
SCARB2-216ENST00000639300 FGF11Q92914 225 aa12.31□□□□□ -0.44
SCARB2-216ENST00000639300 REPIN1Q9BWE0 567 aaKnown RBP12.31□□□□□ -0.44
SCARB2-216ENST00000639300 SRD5A3Q9H8P0 318 aa12.31□□□□□ -0.44
SCARB2-216ENST00000639300 PPIAL4EA0A075B759 164 aa12.31□□□□□ -0.44
SCARB2-216ENST00000639300 IGKV1D-8A0A087WSZ0 117 aa12.31□□□□□ -0.44
SCARB2-216ENST00000639300 ZNF785A8K8V0 405 aa12.31□□□□□ -0.44
SCARB2-216ENST00000639300 PPIAL4DF5H284 164 aa12.31□□□□□ -0.44
SCARB2-216ENST00000639300 ZNF735P0CB33 412 aa12.31□□□□□ -0.44
SCARB2-216ENST00000639300 PPIAL4FP0DN26 164 aa12.31□□□□□ -0.44
SCARB2-216ENST00000639300 AMTP48728 403 aa12.31□□□□□ -0.44
SCARB2-216ENST00000639300 ETFRF1Q6IPR1 90 aa12.31□□□□□ -0.44
SCARB2-216ENST00000639300 VKORC1L1Q8N0U8 176 aa12.31□□□□□ -0.44
SCARB2-216ENST00000639300 OR4X1Q8NH49 305 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms