RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 ZG16O60844 167 aa9.19□□□□□ -0.94
SNIP1-204ENST00000638725 SYNGR4O95473 234 aa9.19□□□□□ -0.94
SNIP1-204ENST00000638725 MT-CO3P00414 261 aa9.19□□□□□ -0.94
SNIP1-204ENST00000638725 HOXA6P31267 233 aa9.19□□□□□ -0.94
SNIP1-204ENST00000638725 GNB2P62879 340 aa9.19□□□□□ -0.94
SNIP1-204ENST00000638725 RPL30P62888 115 aaKnown RBP9.19□□□□□ -0.94
SNIP1-204ENST00000638725 TRA2AQ13595 282 aaKnown RBP eCLIP9.19□□□□□ -0.94
SNIP1-204ENST00000638725 SSX2Q16385 188 aa9.19□□□□□ -0.94
SNIP1-204ENST00000638725 C3AR1Q16581 482 aa9.19□□□□□ -0.94
SNIP1-204ENST00000638725 ACTL10Q5JWF8 245 aa9.19□□□□□ -0.94
SNIP1-204ENST00000638725 PMS2CLQ68D20 193 aa9.19□□□□□ -0.94
SNIP1-204ENST00000638725 NUFIP2Q7Z417 695 aaKnown RBP9.19□□□□□ -0.94
SNIP1-204ENST00000638725 ZNF808Q8N4W9 903 aaPredicted RBP9.19□□□□□ -0.94
SNIP1-204ENST00000638725 OR2T10Q8NGZ9 312 aa9.19□□□□□ -0.94
SNIP1-204ENST00000638725 ZDHHC16Q969W1 377 aa9.19□□□□□ -0.94
SNIP1-204ENST00000638725 C5orf30Q96GV9 206 aa9.19□□□□□ -0.94
SNIP1-204ENST00000638725 TMEM147Q9BVK8 224 aa9.19□□□□□ -0.94
SNIP1-204ENST00000638725 ZNF703Q9H7S9 590 aaPredicted RBP9.19□□□□□ -0.94
SNIP1-204ENST00000638725 HSPB7Q9UBY9 170 aa9.19□□□□□ -0.94
SNIP1-204ENST00000638725 DOCK10Q96BY6 2186 aa9.19□□□□□ -0.94
SNIP1-204ENST00000638725 ODAMA1E959 279 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 PMS2P5A8MQ11 134 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 IGHEP01854 428 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 BMP5P22003 454 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 NPPCP23582 126 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 PDLIM4P50479 330 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 OR2M7Q8NG81 312 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 ACY3Q96HD9 319 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 NOL4LQ96MY1 436 aaPredicted RBP9.18□□□□□ -0.94
SNIP1-204ENST00000638725 NDUFAF3Q9BU61 184 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 MANBALQ9NQG1 85 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 DOCK11Q5JSL3 2073 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 B4E171 279 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 GGCTO75223 188 aaKnown RBP9.18□□□□□ -0.94
SNIP1-204ENST00000638725 S1PR2O95136 353 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 GCGP01275 180 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 EGR1P18146 543 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 CHRNA7P36544 502 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 TSPAN7P41732 249 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 CEBPDP49716 269 aaPredicted RBP9.18□□□□□ -0.94
SNIP1-204ENST00000638725 SPINK9Q5DT21 86 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 ANAPC16Q96DE5 110 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 NEIL1Q96FI4 390 aaPredicted RBP9.18□□□□□ -0.94
SNIP1-204ENST00000638725 DDA1Q9BW61 102 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 OR2D2Q9H210 308 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 AURKAIP1Q9NWT8 199 aaPredicted RBP9.18□□□□□ -0.94
SNIP1-204ENST00000638725 OR6C3Q9NZP0 311 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 SERPINA7P05543 415 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 OR4A8P0C604 315 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 MAGEA5P43359 124 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 TGIF2LXQ8IUE1 241 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 SCCPDHQ8NBX0 429 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 OR10P1Q8NGE3 313 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 OR1L1Q8NH94 360 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 CT55Q8WUE5 264 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 NPCDR1Q9BY65 106 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 C12orf49Q9H741 205 aa9.18□□□□□ -0.94
SNIP1-204ENST00000638725 MBNL3Q9NUK0 354 aaKnown RBP9.18□□□□□ -0.94
SNIP1-204ENST00000638725 LRRC30A6NM36 301 aa9.17□□□□□ -0.94
SNIP1-204ENST00000638725 RNF212BA8MTL3 300 aa9.17□□□□□ -0.94
SNIP1-204ENST00000638725 EREGO14944 169 aa9.17□□□□□ -0.94
SNIP1-204ENST00000638725 P0C879 139 aa9.17□□□□□ -0.94
SNIP1-204ENST00000638725 SELEP16581 610 aa9.17□□□□□ -0.94
SNIP1-204ENST00000638725 COX5AP20674 150 aa9.17□□□□□ -0.94
SNIP1-204ENST00000638725 TIPARPQ7Z3E1 657 aaKnown RBP9.17□□□□□ -0.94
SNIP1-204ENST00000638725 MRPL41Q8IXM3 137 aaKnown RBP9.17□□□□□ -0.94
SNIP1-204ENST00000638725 TDHQ8IZJ6 230 aa9.17□□□□□ -0.94
SNIP1-204ENST00000638725 DTD1Q8TEA8 209 aa9.17□□□□□ -0.94
SNIP1-204ENST00000638725 HLA-CQ95604 372 aa9.17□□□□□ -0.94
SNIP1-204ENST00000638725 TMEM18Q96B42 140 aa9.17□□□□□ -0.94
SNIP1-204ENST00000638725 THOC3Q96J01 351 aaKnown RBP9.17□□□□□ -0.94
SNIP1-204ENST00000638725 TP53TG5Q9Y2B4 290 aa9.17□□□□□ -0.94
SNIP1-204ENST00000638725 CDIPTO14735 213 aa9.17□□□□□ -0.94
SNIP1-204ENST00000638725 NEURL1O76050 574 aa9.17□□□□□ -0.94
SNIP1-204ENST00000638725 NXPH2O95156 264 aa9.17□□□□□ -0.94
SNIP1-204ENST00000638725 MBP02144 154 aa9.17□□□□□ -0.94
SNIP1-204ENST00000638725 CRYAAP02489 173 aa9.17□□□□□ -0.94
SNIP1-204ENST00000638725 OR3A1P47881 315 aa9.17□□□□□ -0.94
SNIP1-204ENST00000638725 ERVK11-1P61568 191 aa9.17□□□□□ -0.94
SNIP1-204ENST00000638725 MSMO1Q15800 293 aa9.17□□□□□ -0.94
SNIP1-204ENST00000638725 ATP6V1FQ16864 119 aa9.17□□□□□ -0.94
SNIP1-204ENST00000638725 LBHQ53QV2 105 aaPredicted RBP9.17□□□□□ -0.94
SNIP1-204ENST00000638725 FAM78BQ5VT40 261 aa9.17□□□□□ -0.94
SNIP1-204ENST00000638725 ZNF645Q8N7E2 425 aa9.17□□□□□ -0.94
SNIP1-204ENST00000638725 FAM173AQ9BQD7 235 aa9.17□□□□□ -0.94
SNIP1-204ENST00000638725 RTL8AQ9BWD3 113 aa9.17□□□□□ -0.94
SNIP1-204ENST00000638725 WASF3Q9UPY6 502 aa9.17□□□□□ -0.94
SNIP1-204ENST00000638725 SIT1Q9Y3P8 196 aa9.17□□□□□ -0.94
SNIP1-204ENST00000638725 WIPI2Q9Y4P8 454 aa9.17□□□□□ -0.94
SNIP1-204ENST00000638725 DNAJC13O75165 2243 aa9.16□□□□□ -0.94
SNIP1-204ENST00000638725 C17orf98A8MV24 154 aa9.16□□□□□ -0.94
SNIP1-204ENST00000638725 C11orf94C9JXX5 98 aa9.16□□□□□ -0.94
SNIP1-204ENST00000638725 TYMSP04818 313 aa9.16□□□□□ -0.94
SNIP1-204ENST00000638725 IL3RAP26951 378 aa9.16□□□□□ -0.94
SNIP1-204ENST00000638725 MPLP40238 635 aa9.16□□□□□ -0.94
SNIP1-204ENST00000638725 BRWD1-AS2P59051 145 aa9.16□□□□□ -0.94
SNIP1-204ENST00000638725 ZXDAP98168 799 aa9.16□□□□□ -0.94
SNIP1-204ENST00000638725 HOXA4Q00056 320 aaPredicted RBP9.16□□□□□ -0.94
SNIP1-204ENST00000638725 SLC10A1Q14973 349 aa9.16□□□□□ -0.94
SNIP1-204ENST00000638725 ACOT6Q3I5F7 207 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms