RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 J3KTA2 159 aa5.29□□□□□ -1.56
SCN1A-212ENST00000636194 GDF9O60383 454 aa5.29□□□□□ -1.56
SCN1A-212ENST00000636194 PDCD6O75340 191 aa5.29□□□□□ -1.56
SCN1A-212ENST00000636194 IER3P46695 156 aa5.29□□□□□ -1.56
SCN1A-212ENST00000636194 KLF9Q13886 244 aaPredicted RBP5.29□□□□□ -1.56
SCN1A-212ENST00000636194 TRIP6Q15654 476 aaKnown RBP5.29□□□□□ -1.56
SCN1A-212ENST00000636194 KIRREL2Q6UWL6 708 aa5.29□□□□□ -1.56
SCN1A-212ENST00000636194 NUBPLQ8TB37 319 aa5.29□□□□□ -1.56
SCN1A-212ENST00000636194 ZPLD1Q8TCW7 415 aa5.29□□□□□ -1.56
SCN1A-212ENST00000636194 SERGEFQ9UGK8 458 aa5.29□□□□□ -1.56
SCN1A-212ENST00000636194 HCFC2Q9Y5Z7 792 aa5.29□□□□□ -1.56
SCN1A-212ENST00000636194 PXDNQ92626 1479 aa5.29□□□□□ -1.56
SCN1A-212ENST00000636194 DNAJC25-GNG10A0A024R161 153 aa5.29□□□□□ -1.56
SCN1A-212ENST00000636194 CEACAM18A8MTB9 384 aa5.29□□□□□ -1.56
SCN1A-212ENST00000636194 H3BMH7 237 aa5.29□□□□□ -1.56
SCN1A-212ENST00000636194 J3QR06 171 aa5.29□□□□□ -1.56
SCN1A-212ENST00000636194 GPR6P46095 362 aaPredicted RBP5.29□□□□□ -1.56
SCN1A-212ENST00000636194 CMC4P56277 68 aaPredicted RBP5.29□□□□□ -1.56
SCN1A-212ENST00000636194 LRRC26Q2I0M4 334 aa5.29□□□□□ -1.56
SCN1A-212ENST00000636194 SLC25A34Q6PIV7 304 aa5.29□□□□□ -1.56
SCN1A-212ENST00000636194 ZNF384Q8TF68 577 aa5.29□□□□□ -1.56
SCN1A-212ENST00000636194 PTP4A1Q93096 173 aa5.29□□□□□ -1.56
SCN1A-212ENST00000636194 SCGB3A1Q96QR1 104 aa5.29□□□□□ -1.56
SCN1A-212ENST00000636194 WRAP73Q9P2S5 460 aaPredicted RBP5.29□□□□□ -1.56
SCN1A-212ENST00000636194 CSF2RBP32927 897 aa5.29□□□□□ -1.56
SCN1A-212ENST00000636194 PITX1P78337 314 aaPredicted RBP5.29□□□□□ -1.56
SCN1A-212ENST00000636194 HLA-DRB3P79483 266 aa5.29□□□□□ -1.56
SCN1A-212ENST00000636194 ACVR1Q04771 509 aa5.29□□□□□ -1.56
SCN1A-212ENST00000636194 SPINK9Q5DT21 86 aa5.29□□□□□ -1.56
SCN1A-212ENST00000636194 RSPO2Q6UXX9 243 aaPredicted RBP5.29□□□□□ -1.56
SCN1A-212ENST00000636194 OR11H7Q8NGC8 314 aa5.29□□□□□ -1.56
SCN1A-212ENST00000636194 ZNF71Q9NQZ8 489 aaPredicted RBP5.29□□□□□ -1.56
SCN1A-212ENST00000636194 APELAP0DMC3 54 aa5.29□□□□□ -1.56
SCN1A-212ENST00000636194 GPX4P36969 197 aaPredicted RBP5.29□□□□□ -1.56
SCN1A-212ENST00000636194 LRP10Q7Z4F1 713 aa5.29□□□□□ -1.56
SCN1A-212ENST00000636194 IL36RNQ9UBH0 155 aa5.29□□□□□ -1.56
SCN1A-212ENST00000636194 SPRY1O43609 319 aaPredicted RBP5.28□□□□□ -1.56
SCN1A-212ENST00000636194 TNFRSF6BO95407 300 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 DHRS2Q13268 280 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 GAPTQ8N292 157 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 C19orf24Q9BVV8 132 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 ZMIZ1Q9ULJ6 1067 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 TNFSF14O43557 240 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 HPXP02790 462 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 MUC1P15941 1255 aaPredicted RBP5.28□□□□□ -1.56
SCN1A-212ENST00000636194 KRTCAP3Q53RY4 240 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 MESTQ5EB52 335 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 LDLRAD3Q86YD5 345 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 RNF122Q9H9V4 155 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 BTAF1O14981 1849 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 PEX7O00628 323 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 IL6RP08887 468 aaPredicted RBP5.28□□□□□ -1.56
SCN1A-212ENST00000636194 GPX3P22352 226 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 FGF8P55075 233 aaPredicted RBP5.28□□□□□ -1.56
SCN1A-212ENST00000636194 ZNF750Q32MQ0 723 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 MRPL24Q96A35 216 aaKnown RBP5.28□□□□□ -1.56
SCN1A-212ENST00000636194 TMEM126AQ9H061 195 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 TMEM160Q9NX00 188 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 K7ERS5 55 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 DHHO43323 396 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 SMAD6O43541 496 aaKnown RBP5.28□□□□□ -1.56
SCN1A-212ENST00000636194 FOXH1O75593 365 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 CLDN10P78369 228 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 MORN3Q6PF18 240 aaPredicted RBP5.28□□□□□ -1.56
SCN1A-212ENST00000636194 SPNS2Q8IVW8 549 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 PLPPR2Q96GM1 343 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 KAZALD1Q96I82 304 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 ZNF385DQ9H6B1 395 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 ZNF430Q9H8G1 570 aaPredicted RBP5.28□□□□□ -1.56
SCN1A-212ENST00000636194 KLF12Q9Y4X4 402 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 SSC5DA1L4H1 1573 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 LILRA5A6NI73 299 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 DLL1O00548 723 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 INAFM2P0DMQ5 153 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 TMEM30BQ3MIR4 351 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 TCTEX1D4Q5JR98 221 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 MBNL2Q5VZF2 373 aaKnown RBP5.28□□□□□ -1.56
SCN1A-212ENST00000636194 ZNF414Q96IQ9 312 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 SPACA5Q96QH8 159 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 A0A1W2PRD5 423 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 A0A1W2PRF3 423 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 A0A1W2PRM7 423 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 SBK3P0C264 359 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 NPPCP23582 126 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 ISL1P61371 349 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 VGLL2Q8N8G2 317 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 TNFRSF14Q92956 283 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 WDFY2Q96P53 400 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 RARRES2Q99969 163 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 GSN-AS1Q9NRJ2 163 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 TJP1Q07157 1748 aa5.28□□□□□ -1.56
SCN1A-212ENST00000636194 THY1P04216 161 aa5.27□□□□□ -1.56
SCN1A-212ENST00000636194 PDLIM4P50479 330 aa5.27□□□□□ -1.56
SCN1A-212ENST00000636194 TCEAL1Q15170 157 aa5.27□□□□□ -1.56
SCN1A-212ENST00000636194 CT83Q5H943 113 aa5.27□□□□□ -1.56
SCN1A-212ENST00000636194 ZFAND6Q6FIF0 208 aa5.27□□□□□ -1.56
SCN1A-212ENST00000636194 ZC3H3Q8IXZ2 948 aaKnown RBP5.27□□□□□ -1.56
SCN1A-212ENST00000636194 MARVELD3Q96A59 401 aa5.27□□□□□ -1.56
SCN1A-212ENST00000636194 KIDINS220Q9ULH0 1771 aa5.27□□□□□ -1.57
SCN1A-212ENST00000636194 J3QW42 95 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms