RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 LINC00470Q9BZP3 86 aa13.91□□□□□ -0.18
CACNA1A-221ENST00000636012 PLSCR2Q9NRY7 297 aa13.91□□□□□ -0.18
CACNA1A-221ENST00000636012 SHANK3Q9BYB0 1731 aa13.91□□□□□ -0.18
CACNA1A-221ENST00000636012 PROB1E7EW31 1015 aa13.91□□□□□ -0.18
CACNA1A-221ENST00000636012 MALP21145 153 aa13.91□□□□□ -0.18
CACNA1A-221ENST00000636012 MAS1LP35410 378 aa13.91□□□□□ -0.18
CACNA1A-221ENST00000636012 PRSS42Q7Z5A4 293 aa13.91□□□□□ -0.18
CACNA1A-221ENST00000636012 CEACAM18A8MTB9 384 aa13.91□□□□□ -0.18
CACNA1A-221ENST00000636012 OR5AN1Q8NGI8 311 aa13.91□□□□□ -0.18
CACNA1A-221ENST00000636012 NKX2-8O15522 239 aa13.9□□□□□ -0.18
CACNA1A-221ENST00000636012 RBFOX2O43251 390 aaKnown RBP eCLIP13.9□□□□□ -0.18
CACNA1A-221ENST00000636012 PHLDA1Q8WV24 401 aaPredicted RBP13.9□□□□□ -0.18
CACNA1A-221ENST00000636012 WNT9BO14905 357 aa13.9□□□□□ -0.18
CACNA1A-221ENST00000636012 CD74P04233 296 aa13.9□□□□□ -0.18
CACNA1A-221ENST00000636012 CELA2AP08217 269 aa13.9□□□□□ -0.18
CACNA1A-221ENST00000636012 LRRC75BQ2VPJ9 315 aa13.9□□□□□ -0.18
CACNA1A-221ENST00000636012 ABHD14BQ96IU4 210 aa13.9□□□□□ -0.18
CACNA1A-221ENST00000636012 WIPI2Q9Y4P8 454 aa13.9□□□□□ -0.18
CACNA1A-221ENST00000636012 GZMKP49863 264 aa13.9□□□□□ -0.18
CACNA1A-221ENST00000636012 FAM169BQ8N8A8 192 aa13.9□□□□□ -0.18
CACNA1A-221ENST00000636012 NFAM1Q8NET5 270 aaPredicted RBP13.9□□□□□ -0.18
CACNA1A-221ENST00000636012 VAX2Q9UIW0 290 aa13.9□□□□□ -0.18
CACNA1A-221ENST00000636012 NKX2-6A6NCS4 301 aa13.9□□□□□ -0.18
CACNA1A-221ENST00000636012 PGLYRP3Q96LB9 341 aa13.9□□□□□ -0.18
CACNA1A-221ENST00000636012 ZDBF2Q9HCK1 2354 aa13.9□□□□□ -0.18
CACNA1A-221ENST00000636012 P2RY1P47900 373 aa13.9□□□□□ -0.18
CACNA1A-221ENST00000636012 DLK1P80370 383 aa13.9□□□□□ -0.18
CACNA1A-221ENST00000636012 C10orf35Q96D05 121 aa13.9□□□□□ -0.18
CACNA1A-221ENST00000636012 SPINT1O43278 529 aa13.9□□□□□ -0.19
CACNA1A-221ENST00000636012 GAPDHP04406 335 aaKnown RBP13.9□□□□□ -0.19
CACNA1A-221ENST00000636012 LAMTOR1Q6IAA8 161 aa13.9□□□□□ -0.19
CACNA1A-221ENST00000636012 REPIN1Q9BWE0 567 aaKnown RBP13.9□□□□□ -0.19
CACNA1A-221ENST00000636012 Q9N2K0 584 aa13.9□□□□□ -0.19
CACNA1A-221ENST00000636012 CXorf51AA0A1B0GTR3 108 aa13.89□□□□□ -0.19
CACNA1A-221ENST00000636012 NPBWR2P48146 333 aa13.89□□□□□ -0.19
CACNA1A-221ENST00000636012 TMEM50BP56557 158 aa13.89□□□□□ -0.19
CACNA1A-221ENST00000636012 ATG4DQ86TL0 474 aaPredicted RBP13.89□□□□□ -0.19
CACNA1A-221ENST00000636012 SNURFLB1AK76 121 aa13.89□□□□□ -0.19
CACNA1A-221ENST00000636012 TDGF1P13385 188 aa13.89□□□□□ -0.19
CACNA1A-221ENST00000636012 OR5AU1Q8NGC0 362 aa13.89□□□□□ -0.19
CACNA1A-221ENST00000636012 PSMG3Q9BT73 122 aaPredicted RBP13.89□□□□□ -0.19
CACNA1A-221ENST00000636012 CHRNA10Q9GZZ6 450 aa13.89□□□□□ -0.19
CACNA1A-221ENST00000636012 ALPK2Q86TB3 2170 aa13.89□□□□□ -0.19
CACNA1A-221ENST00000636012 LYZL2Q7Z4W2 148 aa13.89□□□□□ -0.19
CACNA1A-221ENST00000636012 ZFP30Q9Y2G7 519 aa13.89□□□□□ -0.19
CACNA1A-221ENST00000636012 ANKRD20A5PA0PJZ0 165 aa13.89□□□□□ -0.19
CACNA1A-221ENST00000636012 KLF9Q13886 244 aaPredicted RBP13.89□□□□□ -0.19
CACNA1A-221ENST00000636012 CKS2P33552 79 aa13.89□□□□□ -0.19
CACNA1A-221ENST00000636012 UCP2P55851 309 aa13.89□□□□□ -0.19
CACNA1A-221ENST00000636012 LINC00596Q86U02 117 aa13.89□□□□□ -0.19
CACNA1A-221ENST00000636012 SCN4AP35499 1836 aa13.89□□□□□ -0.19
CACNA1A-221ENST00000636012 ELOA3CA0A087WX78 387 aaPredicted RBP13.89□□□□□ -0.19
CACNA1A-221ENST00000636012 A0A1W2PS18 150 aa13.89□□□□□ -0.19
CACNA1A-221ENST00000636012 ZNF506Q5JVG8 444 aa13.89□□□□□ -0.19
CACNA1A-221ENST00000636012 CLEC18BQ6UXF7 455 aa13.89□□□□□ -0.19
CACNA1A-221ENST00000636012 FAM216AQ8WUB2 273 aa13.89□□□□□ -0.19
CACNA1A-221ENST00000636012 ABHD1Q96SE0 405 aa13.89□□□□□ -0.19
CACNA1A-221ENST00000636012 ZNF236Q9UL36 1845 aa13.89□□□□□ -0.19
CACNA1A-221ENST00000636012 CTSDP07339 412 aaPredicted RBP13.88□□□□□ -0.19
CACNA1A-221ENST00000636012 PGA4P0DJD7 388 aa13.88□□□□□ -0.19
CACNA1A-221ENST00000636012 PGA5P0DJD9 388 aa13.88□□□□□ -0.19
CACNA1A-221ENST00000636012 MS4A3Q96HJ5 214 aa13.88□□□□□ -0.19
CACNA1A-221ENST00000636012 TRBV7-9A0A0J9YWB2 115 aa13.88□□□□□ -0.19
CACNA1A-221ENST00000636012 MRPS16Q9Y3D3 137 aaKnown RBP13.88□□□□□ -0.19
CACNA1A-221ENST00000636012 CYB5R3P00387 301 aaPredicted RBP13.88□□□□□ -0.19
CACNA1A-221ENST00000636012 FAM89BQ8N5H3 189 aa13.88□□□□□ -0.19
CACNA1A-221ENST00000636012 SIPA1L3O60292 1781 aaPredicted RBP13.88□□□□□ -0.19
CACNA1A-221ENST00000636012 REG1AP05451 166 aa13.88□□□□□ -0.19
CACNA1A-221ENST00000636012 GALP22466 123 aa13.88□□□□□ -0.19
CACNA1A-221ENST00000636012 TMEM183AQ8IXX5 376 aa13.88□□□□□ -0.19
CACNA1A-221ENST00000636012 A0A1W2PQD3 144 aa13.88□□□□□ -0.19
CACNA1A-221ENST00000636012 C9orf40Q8IXQ3 194 aa13.88□□□□□ -0.19
CACNA1A-221ENST00000636012 ALG14Q96F25 216 aa13.88□□□□□ -0.19
CACNA1A-221ENST00000636012 TCF20Q9UGU0 1960 aaKnown RBP13.88□□□□□ -0.19
CACNA1A-221ENST00000636012 MVDP53602 400 aa13.87□□□□□ -0.19
CACNA1A-221ENST00000636012 HEATR5AQ86XA9 2040 aa13.87□□□□□ -0.19
CACNA1A-221ENST00000636012 GLI3P10071 1580 aa13.87□□□□□ -0.19
CACNA1A-221ENST00000636012 PRR19A6NJB7 356 aa13.87□□□□□ -0.19
CACNA1A-221ENST00000636012 SLC25A17O43808 307 aa13.87□□□□□ -0.19
CACNA1A-221ENST00000636012 KIAA0040Q15053 153 aa13.87□□□□□ -0.19
CACNA1A-221ENST00000636012 C2orf83Q53S99 150 aa13.87□□□□□ -0.19
CACNA1A-221ENST00000636012 ZNF385AQ96PM9 386 aaKnown RBP13.87□□□□□ -0.19
CACNA1A-221ENST00000636012 TMEM189A5PLL7 270 aa13.87□□□□□ -0.19
CACNA1A-221ENST00000636012 J3QT63 122 aa13.87□□□□□ -0.19
CACNA1A-221ENST00000636012 SHISA5Q8N114 240 aa13.87□□□□□ -0.19
CACNA1A-221ENST00000636012 ST6GALNAC3Q8NDV1 305 aa13.87□□□□□ -0.19
CACNA1A-221ENST00000636012 RCC2Q9P258 522 aaKnown RBP13.87□□□□□ -0.19
CACNA1A-221ENST00000636012 C9JCJ5 164 aa13.87□□□□□ -0.19
CACNA1A-221ENST00000636012 SLIRPQ9GZT3 109 aaKnown RBP13.87□□□□□ -0.19
CACNA1A-221ENST00000636012 CEP250Q9BV73 2442 aa13.87□□□□□ -0.19
CACNA1A-221ENST00000636012 IGHV3-66A0A0C4DH42 116 aa13.87□□□□□ -0.19
CACNA1A-221ENST00000636012 HYPMO75409 117 aa13.87□□□□□ -0.19
CACNA1A-221ENST00000636012 RNASEH2CQ8TDP1 164 aaKnown RBP13.87□□□□□ -0.19
CACNA1A-221ENST00000636012 TMEM56-RWDD3S4R434 201 aa13.87□□□□□ -0.19
CACNA1A-221ENST00000636012 IGHV4-39P01824 125 aa13.86□□□□□ -0.19
CACNA1A-221ENST00000636012 UNQ5815/PRO19632Q6UWF5 114 aa13.86□□□□□ -0.19
CACNA1A-221ENST00000636012 ATOH7Q8N100 152 aa13.86□□□□□ -0.19
CACNA1A-221ENST00000636012 PGLYRP4Q96LB8 373 aa13.86□□□□□ -0.19
CACNA1A-221ENST00000636012 RBKSQ9H477 322 aa13.86□□□□□ -0.19
CACNA1A-221ENST00000636012 NXT2Q9NPJ8 142 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms