RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 RBM38Q9H0Z9 239 aaKnown RBP11.75□□□□□ -0.53
CDC42BPB-209ENST00000634889 SERTAD4Q9NUC0 356 aa11.75□□□□□ -0.53
CDC42BPB-209ENST00000634889 NECAP2Q9NVZ3 263 aa11.75□□□□□ -0.53
CDC42BPB-209ENST00000634889 OR2W1Q9Y3N9 320 aa11.75□□□□□ -0.53
CDC42BPB-209ENST00000634889 RBM7Q9Y580 266 aaKnown RBP11.75□□□□□ -0.53
CDC42BPB-209ENST00000634889 CCDC160A6NGH7 325 aa11.74□□□□□ -0.53
CDC42BPB-209ENST00000634889 SULT1C2O00338 296 aa11.74□□□□□ -0.53
CDC42BPB-209ENST00000634889 RGS5O15539 181 aa11.74□□□□□ -0.53
CDC42BPB-209ENST00000634889 PROP1O75360 226 aa11.74□□□□□ -0.53
CDC42BPB-209ENST00000634889 CT45A6P0DMU7 189 aa11.74□□□□□ -0.53
CDC42BPB-209ENST00000634889 CT45A5P0DMU8 189 aa11.74□□□□□ -0.53
CDC42BPB-209ENST00000634889 CT45A7P0DMV0 189 aa11.74□□□□□ -0.53
CDC42BPB-209ENST00000634889 NAT1P18440 290 aa11.74□□□□□ -0.53
CDC42BPB-209ENST00000634889 ARSJQ5FYB0 599 aaPredicted RBP11.74□□□□□ -0.53
CDC42BPB-209ENST00000634889 OR5AN1Q8NGI8 311 aa11.74□□□□□ -0.53
CDC42BPB-209ENST00000634889 SLIRPQ9GZT3 109 aaKnown RBP11.74□□□□□ -0.53
CDC42BPB-209ENST00000634889 EXTL2Q9UBQ6 330 aa11.74□□□□□ -0.53
CDC42BPB-209ENST00000634889 RSL24D1Q9UHA3 163 aaKnown RBP11.74□□□□□ -0.53
CDC42BPB-209ENST00000634889 RNF150Q9ULK6 438 aa11.74□□□□□ -0.53
CDC42BPB-209ENST00000634889 MRPS7Q9Y2R9 242 aaKnown RBP11.74□□□□□ -0.53
CDC42BPB-209ENST00000634889 SIGLEC9Q9Y336 463 aa11.74□□□□□ -0.53
CDC42BPB-209ENST00000634889 ANK2Q01484 3957 aa11.74□□□□□ -0.53
CDC42BPB-209ENST00000634889 MEIS3P1A6NDR6 274 aa11.73□□□□□ -0.53
CDC42BPB-209ENST00000634889 H0YJW9 148 aa11.73□□□□□ -0.53
CDC42BPB-209ENST00000634889 HAX1O00165 279 aa11.73□□□□□ -0.53
CDC42BPB-209ENST00000634889 TUSC2O75896 110 aa11.73□□□□□ -0.53
CDC42BPB-209ENST00000634889 SLC22A5O76082 557 aa11.73□□□□□ -0.53
CDC42BPB-209ENST00000634889 NFYAP23511 347 aaPredicted RBP11.73□□□□□ -0.53
CDC42BPB-209ENST00000634889 LUMP51884 338 aaPredicted RBP11.73□□□□□ -0.53
CDC42BPB-209ENST00000634889 CDK10Q15131 360 aa11.73□□□□□ -0.53
CDC42BPB-209ENST00000634889 FAM131AQ6UXB0 335 aa11.73□□□□□ -0.53
CDC42BPB-209ENST00000634889 Q6ZS46 218 aa11.73□□□□□ -0.53
CDC42BPB-209ENST00000634889 SNX29P2Q8IUI4 249 aa11.73□□□□□ -0.53
CDC42BPB-209ENST00000634889 LAX1Q8IWV1 398 aa11.73□□□□□ -0.53
CDC42BPB-209ENST00000634889 GPX8Q8TED1 209 aa11.73□□□□□ -0.53
CDC42BPB-209ENST00000634889 CITED1Q99966 193 aa11.73□□□□□ -0.53
CDC42BPB-209ENST00000634889 MIXL1Q9H2W2 232 aa11.73□□□□□ -0.53
CDC42BPB-209ENST00000634889 PLSCR3Q9NRY6 295 aa11.73□□□□□ -0.53
CDC42BPB-209ENST00000634889 LIN7CQ9NUP9 197 aaKnown RBP11.73□□□□□ -0.53
CDC42BPB-209ENST00000634889 SDHAF2Q9NX18 166 aa11.73□□□□□ -0.53
CDC42BPB-209ENST00000634889 WASHC3Q9Y3C0 194 aa11.73□□□□□ -0.53
CDC42BPB-209ENST00000634889 NCBP2LA6PVI3 153 aaKnown RBP11.72□□□□□ -0.53
CDC42BPB-209ENST00000634889 M0R1X1 148 aa11.72□□□□□ -0.53
CDC42BPB-209ENST00000634889 CTDSP2O14595 271 aa11.72□□□□□ -0.53
CDC42BPB-209ENST00000634889 RBBP9O75884 186 aa11.72□□□□□ -0.53
CDC42BPB-209ENST00000634889 OR5H8P0DN80 308 aa11.72□□□□□ -0.53
CDC42BPB-209ENST00000634889 VDAC2P45880 294 aaPredicted RBP11.72□□□□□ -0.53
CDC42BPB-209ENST00000634889 TAS2R46P59540 309 aa11.72□□□□□ -0.53
CDC42BPB-209ENST00000634889 ACTBP60709 375 aa11.72□□□□□ -0.53
CDC42BPB-209ENST00000634889 TAGLNQ01995 201 aaKnown RBP11.72□□□□□ -0.53
CDC42BPB-209ENST00000634889 PDPNQ86YL7 162 aa11.72□□□□□ -0.53
CDC42BPB-209ENST00000634889 FAM71E2Q8N5Q1 922 aa11.72□□□□□ -0.53
CDC42BPB-209ENST00000634889 KLHDC1Q8N7A1 406 aa11.72□□□□□ -0.53
CDC42BPB-209ENST00000634889 ZNF645Q8N7E2 425 aa11.72□□□□□ -0.53
CDC42BPB-209ENST00000634889 Q8N9W7 124 aa11.72□□□□□ -0.53
CDC42BPB-209ENST00000634889 RNF5Q99942 180 aa11.72□□□□□ -0.53
CDC42BPB-209ENST00000634889 WNT10AQ9GZT5 417 aa11.72□□□□□ -0.53
CDC42BPB-209ENST00000634889 RABL2AQ9UBK7 228 aaPredicted RBP11.72□□□□□ -0.53
CDC42BPB-209ENST00000634889 RABL2BQ9UNT1 228 aa11.72□□□□□ -0.53
CDC42BPB-209ENST00000634889 PEX14O75381 377 aa11.71□□□□□ -0.53
CDC42BPB-209ENST00000634889 APOA2P02652 100 aa11.71□□□□□ -0.53
CDC42BPB-209ENST00000634889 FCGR2CP31995 323 aa11.71□□□□□ -0.53
CDC42BPB-209ENST00000634889 RCVRNP35243 200 aa11.71□□□□□ -0.53
CDC42BPB-209ENST00000634889 MMDQ15546 238 aa11.71□□□□□ -0.53
CDC42BPB-209ENST00000634889 ZNF383Q8NA42 475 aa11.71□□□□□ -0.53
CDC42BPB-209ENST00000634889 DRAXINQ8NBI3 349 aaPredicted RBP11.71□□□□□ -0.53
CDC42BPB-209ENST00000634889 GIMAP1Q8WWP7 306 aa11.71□□□□□ -0.53
CDC42BPB-209ENST00000634889 ADTRPQ96IZ2 230 aa11.71□□□□□ -0.53
CDC42BPB-209ENST00000634889 C6orf62Q9GZU0 229 aaPredicted RBP11.71□□□□□ -0.53
CDC42BPB-209ENST00000634889 NXF2Q9GZY0 626 aaKnown RBP11.71□□□□□ -0.53
CDC42BPB-209ENST00000634889 H7C2Y5 167 aa11.7□□□□□ -0.54
CDC42BPB-209ENST00000634889 NBR2O15453 112 aa11.7□□□□□ -0.54
CDC42BPB-209ENST00000634889 PPYP01298 95 aa11.7□□□□□ -0.54
CDC42BPB-209ENST00000634889 FCER2P06734 321 aa11.7□□□□□ -0.54
CDC42BPB-209ENST00000634889 VSIG10L2P0DP72 767 aa11.7□□□□□ -0.54
CDC42BPB-209ENST00000634889 THBS3P49746 956 aa11.7□□□□□ -0.54
CDC42BPB-209ENST00000634889 F2RL1P55085 397 aa11.7□□□□□ -0.54
CDC42BPB-209ENST00000634889 KRTAP10-3P60369 221 aa11.7□□□□□ -0.54
CDC42BPB-209ENST00000634889 MRPS10P82664 201 aaKnown RBP11.7□□□□□ -0.54
CDC42BPB-209ENST00000634889 DYRK1AQ13627 763 aa11.7□□□□□ -0.54
CDC42BPB-209ENST00000634889 MSMO1Q15800 293 aa11.7□□□□□ -0.54
CDC42BPB-209ENST00000634889 GLDNQ6ZMI3 551 aaPredicted RBP11.7□□□□□ -0.54
CDC42BPB-209ENST00000634889 OVCH2Q7RTZ1 564 aa11.7□□□□□ -0.54
CDC42BPB-209ENST00000634889 NPBQ8NG41 125 aa11.7□□□□□ -0.54
CDC42BPB-209ENST00000634889 OR5H2Q8NGV7 314 aa11.7□□□□□ -0.54
CDC42BPB-209ENST00000634889 MCFD2Q8NI22 146 aa11.7□□□□□ -0.54
CDC42BPB-209ENST00000634889 WIPF2Q8TF74 440 aaPredicted RBP11.7□□□□□ -0.54
CDC42BPB-209ENST00000634889 C5orf30Q96GV9 206 aa11.7□□□□□ -0.54
CDC42BPB-209ENST00000634889 RASL11BQ9BPW5 248 aa11.7□□□□□ -0.54
CDC42BPB-209ENST00000634889 EHFQ9NZC4 300 aa11.7□□□□□ -0.54
CDC42BPB-209ENST00000634889 A3GALT2U3KPV4 340 aa11.7□□□□□ -0.54
CDC42BPB-209ENST00000634889 IGKV1D-13A0A0B4J2D9 117 aa11.69□□□□□ -0.54
CDC42BPB-209ENST00000634889 SH2D7A6NKC9 451 aaPredicted RBP11.69□□□□□ -0.54
CDC42BPB-209ENST00000634889 NDUFA3O95167 84 aa11.69□□□□□ -0.54
CDC42BPB-209ENST00000634889 IGHG2P01859 326 aa11.69□□□□□ -0.54
CDC42BPB-209ENST00000634889 IGKV1-13P0DP09 117 aa11.69□□□□□ -0.54
CDC42BPB-209ENST00000634889 RRASP10301 218 aa11.69□□□□□ -0.54
CDC42BPB-209ENST00000634889 AADACP22760 399 aa11.69□□□□□ -0.54
CDC42BPB-209ENST00000634889 CBX3Q13185 183 aa11.69□□□□□ -0.54
CDC42BPB-209ENST00000634889 TMEM95Q3KNT9 176 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms