RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 FAM27BQ5VT28 67 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 ARL6IP6Q8N6S5 226 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 OR52M1Q8NGK5 317 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 CTXND1A0A1B0GTU2 59 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 PLAUP00749 431 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 IGF2P01344 180 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 REG1AP05451 166 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 FCGR3AP08637 254 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 FAM106AQ4KMX7 169 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 DPPA3Q6W0C5 159 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 BPIFA4PQ86YQ2 179 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 OR4C12Q96R67 309 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 SCNM1Q9BWG6 230 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 SCTP09683 121 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 SCGB1A1P11684 91 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 COX19Q49B96 90 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 NCMAPQ5T1S8 102 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 ZCCHC14Q8WYQ9 949 aaKnown RBP10.17□□□□□ -0.78
SHPRH-211ENST00000629427 SIRT7Q9NRC8 400 aa10.17□□□□□ -0.78
SHPRH-211ENST00000629427 PPIAL4CA0A0B4J2A2 164 aa10.16□□□□□ -0.78
SHPRH-211ENST00000629427 PPIAL4GP0DN37 164 aa10.16□□□□□ -0.78
SHPRH-211ENST00000629427 ATP5G2Q06055 141 aa10.16□□□□□ -0.78
SHPRH-211ENST00000629427 ZP4Q12836 540 aa10.16□□□□□ -0.78
SHPRH-211ENST00000629427 RAB37Q96AX2 223 aa10.16□□□□□ -0.78
SHPRH-211ENST00000629427 C1QAP02745 245 aa10.16□□□□□ -0.78
SHPRH-211ENST00000629427 MMP9P14780 707 aa10.16□□□□□ -0.78
SHPRH-211ENST00000629427 VN1R17PQ8TDU5 208 aa10.16□□□□□ -0.78
SHPRH-211ENST00000629427 ZNF107Q9UII5 783 aaPredicted RBP10.16□□□□□ -0.78
SHPRH-211ENST00000629427 RAXQ9Y2V3 346 aa10.16□□□□□ -0.78
SHPRH-211ENST00000629427 PAM16Q9Y3D7 125 aa10.16□□□□□ -0.78
SHPRH-211ENST00000629427 CDS2O95674 445 aa10.16□□□□□ -0.78
SHPRH-211ENST00000629427 CKS2P33552 79 aa10.16□□□□□ -0.78
SHPRH-211ENST00000629427 EFNB2P52799 333 aa10.16□□□□□ -0.78
SHPRH-211ENST00000629427 GCSAMQ8N6F7 178 aa10.16□□□□□ -0.78
SHPRH-211ENST00000629427 MARS2Q96GW9 593 aaKnown RBP10.16□□□□□ -0.78
SHPRH-211ENST00000629427 KLHDC2Q9Y2U9 406 aa10.16□□□□□ -0.78
SHPRH-211ENST00000629427 IGKV3-20P01619 116 aa10.16□□□□□ -0.78
SHPRH-211ENST00000629427 RPL8P62917 257 aaKnown RBP10.16□□□□□ -0.78
SHPRH-211ENST00000629427 SLC25A45Q8N413 288 aa10.16□□□□□ -0.78
SHPRH-211ENST00000629427 WNT2BQ93097 391 aa10.16□□□□□ -0.78
SHPRH-211ENST00000629427 RAB33BQ9H082 229 aa10.16□□□□□ -0.78
SHPRH-211ENST00000629427 KLK13Q9UKR3 277 aa10.16□□□□□ -0.78
SHPRH-211ENST00000629427 CENPVL1A0A0U1RR11 272 aa10.15□□□□□ -0.78
SHPRH-211ENST00000629427 LINC00869P0C866 280 aa10.15□□□□□ -0.78
SHPRH-211ENST00000629427 MFAP4P55083 255 aa10.15□□□□□ -0.78
SHPRH-211ENST00000629427 PCSK4Q6UW60 755 aa10.15□□□□□ -0.78
SHPRH-211ENST00000629427 IDI2-AS1Q9NZ38 188 aa10.15□□□□□ -0.78
SHPRH-211ENST00000629427 STRCP1A6NGW2 1772 aa10.15□□□□□ -0.78
SHPRH-211ENST00000629427 ALPK2Q86TB3 2170 aa10.15□□□□□ -0.78
SHPRH-211ENST00000629427 DOCK8Q8NF50 2099 aa10.15□□□□□ -0.78
SHPRH-211ENST00000629427 A6NDN8 102 aa10.15□□□□□ -0.78
SHPRH-211ENST00000629427 TMEM262E9PQX1 116 aa10.15□□□□□ -0.78
SHPRH-211ENST00000629427 IFNL4K9M1U5 179 aa10.15□□□□□ -0.78
SHPRH-211ENST00000629427 THY1P04216 161 aa10.15□□□□□ -0.78
SHPRH-211ENST00000629427 FGF5P12034 268 aa10.15□□□□□ -0.78
SHPRH-211ENST00000629427 SNAI3Q3KNW1 292 aa10.15□□□□□ -0.78
SHPRH-211ENST00000629427 ATP1A1-AS1Q5TC04 95 aa10.15□□□□□ -0.78
SHPRH-211ENST00000629427 WDFY1Q8IWB7 410 aa10.15□□□□□ -0.78
SHPRH-211ENST00000629427 LEAP2Q969E1 77 aa10.15□□□□□ -0.78
SHPRH-211ENST00000629427 H3BQ15 152 aa10.15□□□□□ -0.78
SHPRH-211ENST00000629427 MPDU1O75352 247 aa10.15□□□□□ -0.78
SHPRH-211ENST00000629427 CDCP2Q5VXM1 449 aa10.15□□□□□ -0.78
SHPRH-211ENST00000629427 NEURL2Q9BR09 285 aa10.15□□□□□ -0.78
SHPRH-211ENST00000629427 MOSPD3O75425 235 aa10.15□□□□□ -0.78
SHPRH-211ENST00000629427 RAX2Q96IS3 184 aa10.15□□□□□ -0.78
SHPRH-211ENST00000629427 SBF1O95248 1867 aa10.15□□□□□ -0.78
SHPRH-211ENST00000629427 FAM74A7A6NL05 159 aa10.15□□□□□ -0.78
SHPRH-211ENST00000629427 TSPAN2O60636 221 aa10.15□□□□□ -0.78
SHPRH-211ENST00000629427 MFAP2P55001 183 aa10.15□□□□□ -0.78
SHPRH-211ENST00000629427 HOGA1Q86XE5 327 aa10.15□□□□□ -0.78
SHPRH-211ENST00000629427 OR11H7Q8NGC8 314 aa10.15□□□□□ -0.78
SHPRH-211ENST00000629427 ST6GAL2Q96JF0 529 aa10.15□□□□□ -0.78
SHPRH-211ENST00000629427 ZFP30Q9Y2G7 519 aa10.15□□□□□ -0.78
SHPRH-211ENST00000629427 SLC25A17O43808 307 aa10.15□□□□□ -0.79
SHPRH-211ENST00000629427 WDR25Q64LD2 544 aaPredicted RBP10.15□□□□□ -0.79
SHPRH-211ENST00000629427 ZPLD1Q8TCW7 415 aa10.15□□□□□ -0.79
SHPRH-211ENST00000629427 A0A0B4J293 547 aa10.14□□□□□ -0.79
SHPRH-211ENST00000629427 IFITM10A6NMD0 228 aa10.14□□□□□ -0.79
SHPRH-211ENST00000629427 NDUFA2O43678 99 aa10.14□□□□□ -0.79
SHPRH-211ENST00000629427 MMP16P51512 607 aa10.14□□□□□ -0.79
SHPRH-211ENST00000629427 KIAA2026Q5HYC2 2103 aa10.14□□□□□ -0.79
SHPRH-211ENST00000629427 COL11A2P13942 1736 aaPredicted RBP10.14□□□□□ -0.79
SHPRH-211ENST00000629427 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.14□□□□□ -0.79
SHPRH-211ENST00000629427 CALYQ9NYX4 217 aa10.14□□□□□ -0.79
SHPRH-211ENST00000629427 TRPM7Q96QT4 1865 aa10.14□□□□□ -0.79
SHPRH-211ENST00000629427 COL24A1Q17RW2 1714 aa10.14□□□□□ -0.79
SHPRH-211ENST00000629427 RCC1P18754 421 aaPredicted RBP10.14□□□□□ -0.79
SHPRH-211ENST00000629427 ATP6V0CP27449 155 aa10.14□□□□□ -0.79
SHPRH-211ENST00000629427 ZNF343Q6P1L6 599 aa10.14□□□□□ -0.79
SHPRH-211ENST00000629427 ABHD12Q8N2K0 398 aa10.14□□□□□ -0.79
SHPRH-211ENST00000629427 MRPL30Q8TCC3 161 aaKnown RBP10.14□□□□□ -0.79
SHPRH-211ENST00000629427 RBKSQ9H477 322 aa10.14□□□□□ -0.79
SHPRH-211ENST00000629427 A8MWL6 223 aa10.14□□□□□ -0.79
SHPRH-211ENST00000629427 DLL1O00548 723 aa10.14□□□□□ -0.79
SHPRH-211ENST00000629427 PPP1R17O96001 155 aa10.14□□□□□ -0.79
SHPRH-211ENST00000629427 CXorf66Q5JRM2 361 aaPredicted RBP10.14□□□□□ -0.79
SHPRH-211ENST00000629427 PRSS27Q9BQR3 290 aa10.14□□□□□ -0.79
SHPRH-211ENST00000629427 HSPB7Q9UBY9 170 aa10.14□□□□□ -0.79
SHPRH-211ENST00000629427 DCAF12L2Q5VW00 463 aa10.14□□□□□ -0.79
SHPRH-211ENST00000629427 RAB24Q969Q5 203 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms