RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 NAV2Q8IVL1 2488 aa6.31□□□□□ -1.4
PKP4-217ENST00000628904 VSTM5A8MXK1 200 aa6.31□□□□□ -1.4
PKP4-217ENST00000628904 SNCAP37840 140 aa6.31□□□□□ -1.4
PKP4-217ENST00000628904 UBE2KP61086 200 aa6.31□□□□□ -1.4
PKP4-217ENST00000628904 HES1Q14469 280 aa6.31□□□□□ -1.4
PKP4-217ENST00000628904 SURF2Q15527 256 aaPredicted RBP6.31□□□□□ -1.4
PKP4-217ENST00000628904 PDLIM3Q53GG5 364 aaPredicted RBP6.31□□□□□ -1.4
PKP4-217ENST00000628904 DHRS11Q6UWP2 260 aa6.31□□□□□ -1.4
PKP4-217ENST00000628904 FOXL2NBQ6ZUU3 175 aa6.31□□□□□ -1.4
PKP4-217ENST00000628904 UBAC2Q8NBM4 344 aa6.31□□□□□ -1.4
PKP4-217ENST00000628904 LHX4Q969G2 390 aa6.31□□□□□ -1.4
PKP4-217ENST00000628904 TMPRSS5Q9H3S3 457 aa6.31□□□□□ -1.4
PKP4-217ENST00000628904 RIMS4Q9H426 269 aaPredicted RBP6.31□□□□□ -1.4
PKP4-217ENST00000628904 LIN7CQ9NUP9 197 aaKnown RBP6.31□□□□□ -1.4
PKP4-217ENST00000628904 CLCF1Q9UBD9 225 aa6.31□□□□□ -1.4
PKP4-217ENST00000628904 hCG_1809904A0A1W2PP81 198 aa6.31□□□□□ -1.4
PKP4-217ENST00000628904 A0A1W2PPE2 198 aa6.31□□□□□ -1.4
PKP4-217ENST00000628904 A0A1W2PR64 198 aa6.31□□□□□ -1.4
PKP4-217ENST00000628904 A0A1W2PRV1 198 aa6.31□□□□□ -1.4
PKP4-217ENST00000628904 ZP3P21754 424 aa6.31□□□□□ -1.4
PKP4-217ENST00000628904 GRNP28799 593 aaKnown RBP6.31□□□□□ -1.4
PKP4-217ENST00000628904 UTF1Q5T230 341 aa6.31□□□□□ -1.4
PKP4-217ENST00000628904 ZNF665Q9H7R5 613 aa6.31□□□□□ -1.4
PKP4-217ENST00000628904 FASNP49327 2511 aaKnown RBP6.31□□□□□ -1.4
PKP4-217ENST00000628904 TANC2Q9HCD6 1990 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 A0A1W2PPV4 95 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 TNFSF13O75888 250 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 FGF7P21781 194 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 TAGLN2P37802 199 aaKnown RBP6.3□□□□□ -1.4
PKP4-217ENST00000628904 F2RL1P55085 397 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 IL24Q13007 206 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 MSMO1Q15800 293 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 ADIRFQ15847 76 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 MSMPQ1L6U9 139 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 NCR3LG1Q68D85 454 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 DNM1P46Q6ZS02 220 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 OR4A4PQ8NGN8 299 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 ACY3Q96HD9 319 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 TRGV10A0A0A0MS01 117 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 ODAMA1E959 279 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 NDUFA2O43678 99 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 SS18L1O75177 396 aaPredicted RBP6.3□□□□□ -1.4
PKP4-217ENST00000628904 TMEM50AO95807 157 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 MMP9P14780 707 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 COL8A2P25067 703 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 SRPXP78539 464 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 RBPJQ06330 500 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 ACP7Q6ZNF0 438 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 COLCA1Q6ZS62 124 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 PIP4P1Q86T03 277 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 DOLPP1Q86YN1 238 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 OR10P1Q8NGE3 313 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 PBDC1Q9BVG4 233 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 VSIRQ9H7M9 311 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 GLRX2Q9NS18 164 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 DKK4Q9UBT3 224 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 FBLN5Q9UBX5 448 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 MRPS18CQ9Y3D5 142 aaKnown RBP6.3□□□□□ -1.4
PKP4-217ENST00000628904 TUBAL3A6NHL2 446 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 SNAPINO95295 136 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 PLAUP00749 431 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 IGLV3-1P01715 115 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 REG1AP05451 166 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 CD82P27701 267 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 SLC38A11Q08AI6 406 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 STUMQ69YW2 141 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 CD177Q8N6Q3 437 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 TMEM171Q8WVE6 324 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 R3HDM4Q96D70 268 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 CYTL1Q9NRR1 136 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 PRELID3BQ9Y3B1 194 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 FAM215AQ9Y5M1 114 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 ZNF462Q96JM2 2506 aa6.3□□□□□ -1.4
PKP4-217ENST00000628904 C9JQL5 133 aa6.29□□□□□ -1.4
PKP4-217ENST00000628904 SPINK4O60575 86 aa6.29□□□□□ -1.4
PKP4-217ENST00000628904 PGA5P0DJD9 388 aa6.29□□□□□ -1.4
PKP4-217ENST00000628904 HOXB1P14653 301 aaPredicted RBP6.29□□□□□ -1.4
PKP4-217ENST00000628904 CD40P25942 277 aa6.29□□□□□ -1.4
PKP4-217ENST00000628904 RPL31P62899 125 aaKnown RBP6.29□□□□□ -1.4
PKP4-217ENST00000628904 HBG1P69891 147 aa6.29□□□□□ -1.4
PKP4-217ENST00000628904 HBG2P69892 147 aa6.29□□□□□ -1.4
PKP4-217ENST00000628904 P2RY6Q15077 328 aa6.29□□□□□ -1.4
PKP4-217ENST00000628904 ZNF787Q6DD87 383 aa6.29□□□□□ -1.4
PKP4-217ENST00000628904 Q8IYB0 196 aa6.29□□□□□ -1.4
PKP4-217ENST00000628904 LINC00469Q8N7U9 141 aa6.29□□□□□ -1.4
PKP4-217ENST00000628904 SPSB4Q96A44 273 aa6.29□□□□□ -1.4
PKP4-217ENST00000628904 NRIP2Q9BQI9 281 aa6.29□□□□□ -1.4
PKP4-217ENST00000628904 TIMM8BQ9Y5J9 83 aaPredicted RBP6.29□□□□□ -1.4
PKP4-217ENST00000628904 POMT1Q9Y6A1 747 aa6.29□□□□□ -1.4
PKP4-217ENST00000628904 COL4A2P08572 1712 aa6.29□□□□□ -1.4
PKP4-217ENST00000628904 A0A0G2JNJ9 132 aa6.29□□□□□ -1.4
PKP4-217ENST00000628904 OOEPA6NGQ2 149 aa6.29□□□□□ -1.4
PKP4-217ENST00000628904 SLC31A2O15432 143 aa6.29□□□□□ -1.4
PKP4-217ENST00000628904 ZNF345Q14585 488 aa6.29□□□□□ -1.4
PKP4-217ENST00000628904 SEM1Q6ZVN7 128 aa6.29□□□□□ -1.4
PKP4-217ENST00000628904 OR4C12Q96R67 309 aa6.29□□□□□ -1.4
PKP4-217ENST00000628904 Q9UFV3 132 aa6.29□□□□□ -1.4
PKP4-217ENST00000628904 STRAPQ9Y3F4 350 aaKnown RBP6.29□□□□□ -1.4
PKP4-217ENST00000628904 S4R3C0 116 aa6.29□□□□□ -1.4
PKP4-217ENST00000628904 LRRC30A6NM36 301 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms