RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 ZDHHC16Q969W1 377 aa10.41□□□□□ -0.74
SYNGAP1-207ENST00000628646 RNF150Q9ULK6 438 aa10.41□□□□□ -0.74
SYNGAP1-207ENST00000628646 LOC105371242A0A075B767 164 aa10.41□□□□□ -0.74
SYNGAP1-207ENST00000628646 CDS2O95674 445 aa10.41□□□□□ -0.74
SYNGAP1-207ENST00000628646 GCSAMQ8N6F7 178 aa10.41□□□□□ -0.74
SYNGAP1-207ENST00000628646 UNKLQ9H9P5 680 aaKnown RBP10.41□□□□□ -0.74
SYNGAP1-207ENST00000628646 CRYM-AS1A6NIL9 109 aa10.41□□□□□ -0.74
SYNGAP1-207ENST00000628646 SIAH2O43255 324 aa10.41□□□□□ -0.74
SYNGAP1-207ENST00000628646 FBXO24O75426 580 aa10.41□□□□□ -0.74
SYNGAP1-207ENST00000628646 FOXH1O75593 365 aa10.41□□□□□ -0.74
SYNGAP1-207ENST00000628646 HLA-DRB3P79483 266 aa10.41□□□□□ -0.74
SYNGAP1-207ENST00000628646 HOXA4Q00056 320 aaPredicted RBP10.41□□□□□ -0.74
SYNGAP1-207ENST00000628646 ZNF709Q8N972 641 aa10.41□□□□□ -0.74
SYNGAP1-207ENST00000628646 EDARADDQ8WWZ3 215 aa10.41□□□□□ -0.74
SYNGAP1-207ENST00000628646 AKR1E2Q96JD6 320 aa10.41□□□□□ -0.74
SYNGAP1-207ENST00000628646 H7C2Y5 167 aa10.41□□□□□ -0.74
SYNGAP1-207ENST00000628646 DVL1O14640 695 aa10.41□□□□□ -0.74
SYNGAP1-207ENST00000628646 IL3RAP26951 378 aa10.41□□□□□ -0.74
SYNGAP1-207ENST00000628646 PPIAL4CA0A0B4J2A2 164 aa10.4□□□□□ -0.74
SYNGAP1-207ENST00000628646 SRRM5B3KS81 715 aa10.4□□□□□ -0.74
SYNGAP1-207ENST00000628646 PPIAL4GP0DN37 164 aa10.4□□□□□ -0.74
SYNGAP1-207ENST00000628646 PEA15Q15121 130 aa10.4□□□□□ -0.74
SYNGAP1-207ENST00000628646 PLGLAQ15195 96 aa10.4□□□□□ -0.74
SYNGAP1-207ENST00000628646 MST1LQ2TV78 715 aa10.4□□□□□ -0.74
SYNGAP1-207ENST00000628646 FAM90A1Q86YD7 464 aa10.4□□□□□ -0.74
SYNGAP1-207ENST00000628646 OR51H1Q8NH63 302 aa10.4□□□□□ -0.74
SYNGAP1-207ENST00000628646 AQP10Q96PS8 301 aa10.4□□□□□ -0.74
SYNGAP1-207ENST00000628646 SSBP3Q9BWW4 388 aaPredicted RBP10.4□□□□□ -0.74
SYNGAP1-207ENST00000628646 ENY2Q9NPA8 101 aa10.4□□□□□ -0.74
SYNGAP1-207ENST00000628646 PLA2G2EQ9NZK7 142 aa10.4□□□□□ -0.74
SYNGAP1-207ENST00000628646 KALRNO60229 2985 aa10.4□□□□□ -0.74
SYNGAP1-207ENST00000628646 RNF223E7ERA6 249 aa10.4□□□□□ -0.74
SYNGAP1-207ENST00000628646 F8W036 122 aa10.4□□□□□ -0.74
SYNGAP1-207ENST00000628646 SELLP14151 372 aa10.4□□□□□ -0.74
SYNGAP1-207ENST00000628646 EGR1P18146 543 aa10.4□□□□□ -0.74
SYNGAP1-207ENST00000628646 RAB5CP51148 216 aa10.4□□□□□ -0.74
SYNGAP1-207ENST00000628646 DSCR9P59020 149 aa10.4□□□□□ -0.74
SYNGAP1-207ENST00000628646 HBG1P69891 147 aa10.4□□□□□ -0.74
SYNGAP1-207ENST00000628646 HBG2P69892 147 aa10.4□□□□□ -0.74
SYNGAP1-207ENST00000628646 DHRS11Q6UWP2 260 aa10.4□□□□□ -0.74
SYNGAP1-207ENST00000628646 TMED6Q8WW62 240 aa10.4□□□□□ -0.74
SYNGAP1-207ENST00000628646 SIRT7Q9NRC8 400 aa10.4□□□□□ -0.74
SYNGAP1-207ENST00000628646 TSPAN4O14817 238 aa10.4□□□□□ -0.75
SYNGAP1-207ENST00000628646 TUSC2O75896 110 aa10.4□□□□□ -0.75
SYNGAP1-207ENST00000628646 RPP30P78346 268 aaKnown RBP10.4□□□□□ -0.75
SYNGAP1-207ENST00000628646 Q8NFD4 153 aa10.4□□□□□ -0.75
SYNGAP1-207ENST00000628646 Q96MF0 132 aa10.4□□□□□ -0.75
SYNGAP1-207ENST00000628646 NRIP2Q9BQI9 281 aa10.4□□□□□ -0.75
SYNGAP1-207ENST00000628646 GLIPR1P48060 266 aa10.39□□□□□ -0.75
SYNGAP1-207ENST00000628646 PXDC1Q5TGL8 231 aa10.39□□□□□ -0.75
SYNGAP1-207ENST00000628646 UQCC3Q6UW78 93 aa10.39□□□□□ -0.75
SYNGAP1-207ENST00000628646 LILRB2Q8N423 598 aa10.39□□□□□ -0.75
SYNGAP1-207ENST00000628646 Q9N2K0 584 aa10.39□□□□□ -0.75
SYNGAP1-207ENST00000628646 OR2W1Q9Y3N9 320 aa10.39□□□□□ -0.75
SYNGAP1-207ENST00000628646 ADCYAP1P18509 176 aa10.39□□□□□ -0.75
SYNGAP1-207ENST00000628646 VDAC1P21796 283 aa10.39□□□□□ -0.75
SYNGAP1-207ENST00000628646 USF1P22415 310 aaPredicted RBP10.39□□□□□ -0.75
SYNGAP1-207ENST00000628646 ZNF561Q8N587 486 aa10.39□□□□□ -0.75
SYNGAP1-207ENST00000628646 CACFD1Q9UGQ2 172 aa10.39□□□□□ -0.75
SYNGAP1-207ENST00000628646 PRELID3BQ9Y3B1 194 aa10.39□□□□□ -0.75
SYNGAP1-207ENST00000628646 STRAPQ9Y3F4 350 aaKnown RBP10.39□□□□□ -0.75
SYNGAP1-207ENST00000628646 GZMHP20718 246 aa10.39□□□□□ -0.75
SYNGAP1-207ENST00000628646 ZBTB34Q8NCN2 500 aa10.39□□□□□ -0.75
SYNGAP1-207ENST00000628646 HRH4Q9H3N8 390 aa10.39□□□□□ -0.75
SYNGAP1-207ENST00000628646 ODAMA1E959 279 aa10.38□□□□□ -0.75
SYNGAP1-207ENST00000628646 BTBD17A6NE02 478 aa10.38□□□□□ -0.75
SYNGAP1-207ENST00000628646 ZNF273Q14593 569 aa10.38□□□□□ -0.75
SYNGAP1-207ENST00000628646 SRSF7Q16629 238 aaKnown RBP eCLIP10.38□□□□□ -0.75
SYNGAP1-207ENST00000628646 OR8U1Q8NH10 309 aa10.38□□□□□ -0.75
SYNGAP1-207ENST00000628646 GNPNAT1Q96EK6 184 aaPredicted RBP10.38□□□□□ -0.75
SYNGAP1-207ENST00000628646 GALNT14Q96FL9 552 aa10.38□□□□□ -0.75
SYNGAP1-207ENST00000628646 ZNF714Q96N38 554 aa10.38□□□□□ -0.75
SYNGAP1-207ENST00000628646 DEFB113Q30KQ7 82 aa10.38□□□□□ -0.75
SYNGAP1-207ENST00000628646 SVBPQ8N300 66 aa10.38□□□□□ -0.75
SYNGAP1-207ENST00000628646 OR1S2Q8NGQ3 325 aa10.38□□□□□ -0.75
SYNGAP1-207ENST00000628646 SAT2Q96F10 170 aaPredicted RBP10.38□□□□□ -0.75
SYNGAP1-207ENST00000628646 EIF5A2Q9GZV4 153 aaKnown RBP10.38□□□□□ -0.75
SYNGAP1-207ENST00000628646 IGHV3OR16-10A0A075B7F0 116 aa10.38□□□□□ -0.75
SYNGAP1-207ENST00000628646 SCAF4O95104 1147 aaKnown RBP10.38□□□□□ -0.75
SYNGAP1-207ENST00000628646 TBC1D26Q86UD7 250 aa10.38□□□□□ -0.75
SYNGAP1-207ENST00000628646 LFNGQ8NES3 379 aa10.38□□□□□ -0.75
SYNGAP1-207ENST00000628646 BPIFCQ8NFQ6 507 aa10.38□□□□□ -0.75
SYNGAP1-207ENST00000628646 ABCA2Q9BZC7 2435 aa10.38□□□□□ -0.75
SYNGAP1-207ENST00000628646 ACTL6BO94805 426 aa10.38□□□□□ -0.75
SYNGAP1-207ENST00000628646 HBE1P02100 147 aa10.38□□□□□ -0.75
SYNGAP1-207ENST00000628646 CEACAM6P40199 344 aa10.38□□□□□ -0.75
SYNGAP1-207ENST00000628646 GPR12P47775 334 aa10.38□□□□□ -0.75
SYNGAP1-207ENST00000628646 P2RY1P47900 373 aa10.38□□□□□ -0.75
SYNGAP1-207ENST00000628646 HMGN3Q15651 99 aa10.38□□□□□ -0.75
SYNGAP1-207ENST00000628646 AKIRIN2Q53H80 203 aa10.38□□□□□ -0.75
SYNGAP1-207ENST00000628646 TGIF2LYQ8IUE0 185 aa10.38□□□□□ -0.75
SYNGAP1-207ENST00000628646 LYG1Q8N1E2 194 aa10.38□□□□□ -0.75
SYNGAP1-207ENST00000628646 LHFPL5Q8TAF8 219 aa10.38□□□□□ -0.75
SYNGAP1-207ENST00000628646 ABHD14BQ96IU4 210 aa10.38□□□□□ -0.75
SYNGAP1-207ENST00000628646 TNFRSF19Q9NS68 423 aa10.38□□□□□ -0.75
SYNGAP1-207ENST00000628646 LAMA5O15230 3695 aa10.37□□□□□ -0.75
SYNGAP1-207ENST00000628646 DNASE2O00115 360 aaPredicted RBP10.37□□□□□ -0.75
SYNGAP1-207ENST00000628646 DANCRP0C864 163 aa10.37□□□□□ -0.75
SYNGAP1-207ENST00000628646 SRSF3P84103 164 aaKnown RBP10.37□□□□□ -0.75
SYNGAP1-207ENST00000628646 TAGLNQ01995 201 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms