RNA–Protein interactions for RNA: ENST00000626660.1

SQSTM1-216, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-216ENST00000626660 CNPY1Q3B7I2 92 aa15.34■□□□□ 0.05
SQSTM1-216ENST00000626660 PYDC2Q56P42 97 aa15.34■□□□□ 0.05
SQSTM1-216ENST00000626660 DHRS7BQ6IAN0 325 aaPredicted RBP15.34■□□□□ 0.05
SQSTM1-216ENST00000626660 OVCH2Q7RTZ1 564 aa15.34■□□□□ 0.05
SQSTM1-216ENST00000626660 GAB2Q9UQC2 676 aa15.34■□□□□ 0.05
SQSTM1-216ENST00000626660 CUBNO60494 3623 aa15.34■□□□□ 0.05
SQSTM1-216ENST00000626660 IGHV3-72A0A0B4J1Y9 119 aa15.33■□□□□ 0.04
SQSTM1-216ENST00000626660 FAM90A9PA6NNJ1 464 aa15.33■□□□□ 0.04
SQSTM1-216ENST00000626660 M0R1X1 148 aa15.33■□□□□ 0.04
SQSTM1-216ENST00000626660 GSTZ1O43708 216 aaPredicted RBP15.33■□□□□ 0.04
SQSTM1-216ENST00000626660 IGKV1D-33P01593 117 aa15.33■□□□□ 0.04
SQSTM1-216ENST00000626660 IGKV1-33P01594 117 aa15.33■□□□□ 0.04
SQSTM1-216ENST00000626660 TBPP20226 339 aa15.33■□□□□ 0.04
SQSTM1-216ENST00000626660 AADACP22760 399 aa15.33■□□□□ 0.04
SQSTM1-216ENST00000626660 HERV-K104P61576 105 aa15.33■□□□□ 0.04
SQSTM1-216ENST00000626660 LSAMPQ13449 338 aa15.33■□□□□ 0.04
SQSTM1-216ENST00000626660 KRTAP24-1Q3LI83 254 aa15.33■□□□□ 0.04
SQSTM1-216ENST00000626660 TMEM219Q86XT9 240 aa15.33■□□□□ 0.04
SQSTM1-216ENST00000626660 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.33■□□□□ 0.04
SQSTM1-216ENST00000626660 GIMAP1Q8WWP7 306 aa15.33■□□□□ 0.04
SQSTM1-216ENST00000626660 AKR1E2Q96JD6 320 aa15.33■□□□□ 0.04
SQSTM1-216ENST00000626660 NABP2Q9BQ15 211 aa15.33■□□□□ 0.04
SQSTM1-216ENST00000626660 ZNF251Q9BRH9 671 aa15.33■□□□□ 0.04
SQSTM1-216ENST00000626660 ZNF107Q9UII5 783 aaPredicted RBP15.33■□□□□ 0.04
SQSTM1-216ENST00000626660 V9GYH0 126 aa15.33■□□□□ 0.04
SQSTM1-216ENST00000626660 PPYP01298 95 aa15.32■□□□□ 0.04
SQSTM1-216ENST00000626660 CSF1P09603 554 aa15.32■□□□□ 0.04
SQSTM1-216ENST00000626660 TMEM11P17152 192 aa15.32■□□□□ 0.04
SQSTM1-216ENST00000626660 ETV6P41212 452 aa15.32■□□□□ 0.04
SQSTM1-216ENST00000626660 TAS2R19P59542 299 aa15.32■□□□□ 0.04
SQSTM1-216ENST00000626660 TSPAN5P62079 268 aa15.32■□□□□ 0.04
SQSTM1-216ENST00000626660 RNASE10Q5GAN6 216 aaKnown RBP15.32■□□□□ 0.04
SQSTM1-216ENST00000626660 C16orf82Q7Z2V1 217 aa15.32■□□□□ 0.04
SQSTM1-216ENST00000626660 ZNF645Q8N7E2 425 aa15.32■□□□□ 0.04
SQSTM1-216ENST00000626660 TMEM229BQ8NBD8 167 aa15.32■□□□□ 0.04
SQSTM1-216ENST00000626660 OR6F1Q8NGZ6 308 aa15.32■□□□□ 0.04
SQSTM1-216ENST00000626660 OR2T10Q8NGZ9 312 aa15.32■□□□□ 0.04
SQSTM1-216ENST00000626660 SDHAF2Q9NX18 166 aa15.32■□□□□ 0.04
SQSTM1-216ENST00000626660 TAS2R8Q9NYW2 309 aa15.32■□□□□ 0.04
SQSTM1-216ENST00000626660 IGKV1D-13A0A0B4J2D9 117 aa15.31■□□□□ 0.04
SQSTM1-216ENST00000626660 OR2F2O95006 317 aa15.31■□□□□ 0.04
SQSTM1-216ENST00000626660 IFNA6P05013 189 aa15.31■□□□□ 0.04
SQSTM1-216ENST00000626660 IGKV1-13P0DP09 117 aa15.31■□□□□ 0.04
SQSTM1-216ENST00000626660 FXYD4P59646 89 aa15.31■□□□□ 0.04
SQSTM1-216ENST00000626660 VAX1Q5SQQ9 334 aa15.31■□□□□ 0.04
SQSTM1-216ENST00000626660 DHRS11Q6UWP2 260 aa15.31■□□□□ 0.04
SQSTM1-216ENST00000626660 CCBE1Q6UXH8 406 aaPredicted RBP15.31■□□□□ 0.04
SQSTM1-216ENST00000626660 TMEM17Q86X19 198 aa15.31■□□□□ 0.04
SQSTM1-216ENST00000626660 SECTM1Q8WVN6 248 aa15.31■□□□□ 0.04
SQSTM1-216ENST00000626660 ZNF2Q9BSG1 426 aaPredicted RBP15.31■□□□□ 0.04
SQSTM1-216ENST00000626660 SLC25A33Q9BSK2 321 aa15.31■□□□□ 0.04
SQSTM1-216ENST00000626660 C19orf24Q9BVV8 132 aa15.31■□□□□ 0.04
SQSTM1-216ENST00000626660 NPFFR1Q9GZQ6 430 aa15.31■□□□□ 0.04
SQSTM1-216ENST00000626660 OR5H14A6NHG9 310 aa15.3■□□□□ 0.04
SQSTM1-216ENST00000626660 M0QYG6 137 aa15.3■□□□□ 0.04
SQSTM1-216ENST00000626660 CHST1O43916 411 aa15.3■□□□□ 0.04
SQSTM1-216ENST00000626660 MOSP00540 346 aa15.3■□□□□ 0.04
SQSTM1-216ENST00000626660 APOA2P02652 100 aa15.3■□□□□ 0.04
SQSTM1-216ENST00000626660 CD3DP04234 171 aa15.3■□□□□ 0.04
SQSTM1-216ENST00000626660 CT45A6P0DMU7 189 aa15.3■□□□□ 0.04
SQSTM1-216ENST00000626660 CT45A5P0DMU8 189 aa15.3■□□□□ 0.04
SQSTM1-216ENST00000626660 CT45A7P0DMV0 189 aa15.3■□□□□ 0.04
SQSTM1-216ENST00000626660 MC5RP33032 325 aa15.3■□□□□ 0.04
SQSTM1-216ENST00000626660 EBI3Q14213 229 aa15.3■□□□□ 0.04
SQSTM1-216ENST00000626660 HNF4GQ14541 408 aa15.3■□□□□ 0.04
SQSTM1-216ENST00000626660 Q8N402 240 aa15.3■□□□□ 0.04
SQSTM1-216ENST00000626660 EAF1Q96JC9 268 aaPredicted RBP15.3■□□□□ 0.04
SQSTM1-216ENST00000626660 RBM14Q96PK6 669 aaKnown RBP15.3■□□□□ 0.04
SQSTM1-216ENST00000626660 SLC5A7Q9GZV3 580 aa15.3■□□□□ 0.04
SQSTM1-216ENST00000626660 PTTG2Q9NZH5 202 aa15.3■□□□□ 0.04
SQSTM1-216ENST00000626660 RBMX2Q9Y388 322 aaKnown RBP15.3■□□□□ 0.04
SQSTM1-216ENST00000626660 FBN1P35555 2871 aaKnown RBP15.3■□□□□ 0.04
SQSTM1-216ENST00000626660 COL6A5A8TX70 2615 aa15.3■□□□□ 0.04
SQSTM1-216ENST00000626660 PROP1O75360 226 aa15.29■□□□□ 0.04
SQSTM1-216ENST00000626660 RAB3DO95716 219 aa15.29■□□□□ 0.04
SQSTM1-216ENST00000626660 HKR1P10072 659 aa15.29■□□□□ 0.04
SQSTM1-216ENST00000626660 STEAP1BQ6NZ63 245 aa15.29■□□□□ 0.04
SQSTM1-216ENST00000626660 GLDNQ6ZMI3 551 aaPredicted RBP15.29■□□□□ 0.04
SQSTM1-216ENST00000626660 DRAXINQ8NBI3 349 aaPredicted RBP15.29■□□□□ 0.04
SQSTM1-216ENST00000626660 OR4C13Q8NGP0 309 aa15.29■□□□□ 0.04
SQSTM1-216ENST00000626660 BORCS5Q969J3 196 aa15.29■□□□□ 0.04
SQSTM1-216ENST00000626660 ADTRPQ96IZ2 230 aa15.29■□□□□ 0.04
SQSTM1-216ENST00000626660 THAP7Q9BT49 309 aaPredicted RBP15.29■□□□□ 0.04
SQSTM1-216ENST00000626660 C1RLQ9NZP8 487 aa15.29■□□□□ 0.04
SQSTM1-216ENST00000626660 MOB4Q9Y3A3 225 aa15.29■□□□□ 0.04
SQSTM1-216ENST00000626660 WASHC3Q9Y3C0 194 aa15.29■□□□□ 0.04
SQSTM1-216ENST00000626660 H0YJW9 148 aa15.28■□□□□ 0.04
SQSTM1-216ENST00000626660 H7C2Y5 167 aa15.28■□□□□ 0.04
SQSTM1-216ENST00000626660 M0QZK8 103 aa15.28■□□□□ 0.04
SQSTM1-216ENST00000626660 CD74P04233 296 aa15.28■□□□□ 0.04
SQSTM1-216ENST00000626660 THBS3P49746 956 aa15.28■□□□□ 0.04
SQSTM1-216ENST00000626660 TAGLNQ01995 201 aaKnown RBP15.28■□□□□ 0.04
SQSTM1-216ENST00000626660 CBX3Q13185 183 aa15.28■□□□□ 0.04
SQSTM1-216ENST00000626660 MEF2DQ14814 521 aa15.28■□□□□ 0.04
SQSTM1-216ENST00000626660 MSMO1Q15800 293 aa15.28■□□□□ 0.04
SQSTM1-216ENST00000626660 ZNF79Q15937 498 aa15.28■□□□□ 0.04
SQSTM1-216ENST00000626660 ZNF660Q6AZW8 331 aaPredicted RBP15.28■□□□□ 0.04
SQSTM1-216ENST00000626660 ARRDC1Q8N5I2 433 aa15.28■□□□□ 0.04
SQSTM1-216ENST00000626660 OR5AN1Q8NGI8 311 aa15.28■□□□□ 0.04
SQSTM1-216ENST00000626660 MOB3AQ96BX8 217 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms