RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 PPIBP23284 216 aaKnown RBP2.19□□□□□ -2.06
CDKL5-208ENST00000624953 CNTFRP26992 372 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 PSMB8P28062 276 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 SLC6A1P30531 599 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 NAA10P41227 235 aaPredicted RBP2.19□□□□□ -2.06
CDKL5-208ENST00000624953 PTGFRP43088 359 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 CX3CR1P49238 355 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 FHITP49789 147 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 ZNF121P58317 390 aaPredicted RBP2.19□□□□□ -2.06
CDKL5-208ENST00000624953 KRTAP10-8P60410 259 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 VSNL1P62760 191 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 HERV-K104P63124 156 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 ST3GAL3Q11203 375 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 DYNC1I2Q13409 638 aaKnown RBP2.19□□□□□ -2.06
CDKL5-208ENST00000624953 CYP51A1Q16850 503 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 C17orf58Q2M2W7 97 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 RNF212Q495C1 297 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 AGKQ53H12 422 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 CYBRD1Q53TN4 286 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 ZNF506Q5JVG8 444 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 LINC01590Q5TEZ4 76 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 MINOS1Q5TGZ0 78 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 AADACL4Q5VUY2 407 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 NANOGP8Q6NSW7 305 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 SMARCD3Q6STE5 483 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 FAM159AQ6UWV7 190 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 DRAM2Q6UX65 266 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 CALHM1Q8IU99 346 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 ZNF561Q8N587 486 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 Q8N6K4 173 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 OR11H1Q8NG94 326 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 OR8B12Q8NGG6 310 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 OR8D4Q8NGM9 314 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 OR8U1Q8NH10 309 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 OR4K13Q8NH42 304 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 C4orf3Q8WVX3 66 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.19□□□□□ -2.06
CDKL5-208ENST00000624953 DCUN1D4Q92564 292 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 DLX4Q92988 240 aaPredicted RBP2.19□□□□□ -2.06
CDKL5-208ENST00000624953 SLAMF6Q96DU3 332 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 RNF170Q96K19 258 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 TMEM109Q9BVC6 243 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 TMEM133Q9H2Q1 129 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 VIPAS39Q9H9C1 493 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 ABCB10Q9NRK6 738 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 TAS2R1Q9NYW7 299 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 DNAJC27Q9NZQ0 273 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 MINOS1-NBL1R4GNA1 71 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 DNAH5Q8TE73 4624 aa2.19□□□□□ -2.06
CDKL5-208ENST00000624953 IGKV1-27A0A075B6S5 117 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 TMEM210A6NLX4 147 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 ANKRD30BLA7E2S9 258 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 EVPLLA8MZ36 301 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 KLLNB2CW77 178 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 ZNF878C9JN71 531 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 BUB1B-PAK6H3BSN5 160 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 ARPC3O15145 178 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 SOX15O60248 233 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 NOS1APO75052 506 aaPredicted RBP2.18□□□□□ -2.06
CDKL5-208ENST00000624953 DIRAS1O95057 198 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 ZNF682O95780 498 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 IGHG4P01861 327 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 RBP4P02753 201 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 CALB2P22676 271 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 PTBP1P26599 531 aaKnown RBP eCLIP2.18□□□□□ -2.063e-9■■■■□ 26.5
CDKL5-208ENST00000624953 HTR1DP28221 377 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 CD34P28906 385 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 CRABP1P29762 137 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 KDELR2P33947 212 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 DDOSTP39656 456 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 EDDM3BP56851 147 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 OR12D2P58182 307 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 SELENOWP63302 87 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 BDH1Q02338 343 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 EIF2B1Q14232 305 aaKnown RBP2.18□□□□□ -2.06
CDKL5-208ENST00000624953 TRAM2Q15035 370 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 Q1RN00 199 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 HLA-DRB5Q30154 266 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 LRRC23Q53EV4 343 aaPredicted RBP2.18□□□□□ -2.06
CDKL5-208ENST00000624953 MUC21Q5SSG8 566 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 TPTE2P1Q5T6R2 138 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 PRAMEF5Q5TYX0 476 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 HAGHLQ6PII5 290 aaPredicted RBP2.18□□□□□ -2.06
CDKL5-208ENST00000624953 ZNF730Q6ZMV8 503 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 DPY19L2P2Q6ZN68 376 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 TMUB2Q71RG4 321 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 TRPM8Q7Z2W7 1104 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 DRAM1Q8N682 238 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 FAM86B1Q8N7N1 296 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 ZNF676Q8N7Q3 588 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 ZNF491Q8N8L2 437 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 Q8N9W7 124 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 OR13D1Q8NGV5 346 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 OR56B4Q8NH76 319 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 NDNFQ8TB73 568 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 RNF133Q8WVZ7 376 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 PIGCQ92535 297 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 FCGR1BQ92637 280 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 ARPC1AQ92747 370 aa2.18□□□□□ -2.06
CDKL5-208ENST00000624953 SPTSSAQ969W0 71 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms