RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 ATP23Q9Y6H3 246 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 IGHV3-43A0A0B4J1X8 118 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 IGHV3-43DP0DP04 118 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 MPZP25189 248 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 MRPS11P82912 194 aaKnown RBP7.73□□□□□ -1.17
VCL-206ENST00000623461 RNF126Q9BV68 326 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 IL36RNQ9UBH0 155 aa7.73□□□□□ -1.17
VCL-206ENST00000623461 TBL2Q9Y4P3 447 aaKnown RBP7.73□□□□□ -1.17
VCL-206ENST00000623461 A0A1B0GW64 132 aa7.72□□□□□ -1.17
VCL-206ENST00000623461 MEX3AA1L020 520 aaKnown RBP7.72□□□□□ -1.17
VCL-206ENST00000623461 CXCL10P02778 98 aa7.72□□□□□ -1.17
VCL-206ENST00000623461 GPX4P36969 197 aaPredicted RBP7.72□□□□□ -1.17
VCL-206ENST00000623461 RPL30P62888 115 aaKnown RBP7.72□□□□□ -1.17
VCL-206ENST00000623461 SARAFQ96BY9 339 aa7.72□□□□□ -1.17
VCL-206ENST00000623461 HIST1H2BLQ99880 126 aa7.72□□□□□ -1.17
VCL-206ENST00000623461 OR2H1Q9GZK4 316 aa7.72□□□□□ -1.17
VCL-206ENST00000623461 RAMP1O60894 148 aa7.72□□□□□ -1.17
VCL-206ENST00000623461 PPP1CAP62136 330 aa7.72□□□□□ -1.17
VCL-206ENST00000623461 LINC01590Q5TEZ4 76 aa7.72□□□□□ -1.17
VCL-206ENST00000623461 ZNF576Q9H609 170 aa7.72□□□□□ -1.17
VCL-206ENST00000623461 C19orf67A6NJJ6 358 aa7.72□□□□□ -1.17
VCL-206ENST00000623461 MARCH11A6NNE9 402 aa7.72□□□□□ -1.17
VCL-206ENST00000623461 NDUFB3O43676 98 aa7.72□□□□□ -1.17
VCL-206ENST00000623461 OR2I1PQ8NGU4 316 aa7.72□□□□□ -1.17
VCL-206ENST00000623461 hADV38S2A0JD32 116 aa7.72□□□□□ -1.17
VCL-206ENST00000623461 MGAMO43451 1857 aa7.72□□□□□ -1.17
VCL-206ENST00000623461 ARF6P62330 175 aa7.72□□□□□ -1.17
VCL-206ENST00000623461 LY6G6FQ5SQ64 297 aa7.72□□□□□ -1.17
VCL-206ENST00000623461 ZNF645Q8N7E2 425 aa7.72□□□□□ -1.17
VCL-206ENST00000623461 LMO7DNF2Z398 122 aa7.72□□□□□ -1.17
VCL-206ENST00000623461 K7ESF4 209 aa7.72□□□□□ -1.17
VCL-206ENST00000623461 EPHA8P29322 1005 aaPredicted RBP7.72□□□□□ -1.17
VCL-206ENST00000623461 GNB2P62879 340 aa7.72□□□□□ -1.17
VCL-206ENST00000623461 SLC35B1P78383 322 aa7.72□□□□□ -1.17
VCL-206ENST00000623461 LPAL2Q16609 132 aa7.72□□□□□ -1.17
VCL-206ENST00000623461 AMELYQ99218 206 aa7.72□□□□□ -1.17
VCL-206ENST00000623461 LRRC61Q9BV99 259 aa7.72□□□□□ -1.17
VCL-206ENST00000623461 G6PC2Q9NQR9 355 aa7.72□□□□□ -1.17
VCL-206ENST00000623461 TINAGQ9UJW2 476 aa7.72□□□□□ -1.17
VCL-206ENST00000623461 COX6CP09669 75 aa7.72□□□□□ -1.17
VCL-206ENST00000623461 SNRNP40Q96DI7 357 aaKnown RBP7.72□□□□□ -1.17
VCL-206ENST00000623461 ASCL3Q9NQ33 180 aa7.72□□□□□ -1.17
VCL-206ENST00000623461 TMEM106BQ9NUM4 274 aa7.72□□□□□ -1.17
VCL-206ENST00000623461 GBF1Q92538 1859 aa7.72□□□□□ -1.17
VCL-206ENST00000623461 DOCK4Q8N1I0 1966 aa7.71□□□□□ -1.17
VCL-206ENST00000623461 IGHMP01871 453 aa7.71□□□□□ -1.17
VCL-206ENST00000623461 HOXA4Q00056 320 aaPredicted RBP7.71□□□□□ -1.17
VCL-206ENST00000623461 MOB3BQ86TA1 216 aa7.71□□□□□ -1.17
VCL-206ENST00000623461 FLYWCH2Q96CP2 140 aaKnown RBP7.71□□□□□ -1.17
VCL-206ENST00000623461 SARGQ9BW04 601 aa7.71□□□□□ -1.17
VCL-206ENST00000623461 THYN1Q9P016 225 aa7.71□□□□□ -1.17
VCL-206ENST00000623461 JKAMPQ9P055 326 aa7.71□□□□□ -1.17
VCL-206ENST00000623461 M0R1B8 84 aa7.71□□□□□ -1.17
VCL-206ENST00000623461 SYNGR1O43759 233 aa7.71□□□□□ -1.17
VCL-206ENST00000623461 IGKV1D-16P01601 117 aa7.71□□□□□ -1.17
VCL-206ENST00000623461 TNFRSF1AP19438 455 aa7.71□□□□□ -1.17
VCL-206ENST00000623461 SMAD4Q13485 552 aaKnown RBP7.71□□□□□ -1.17
VCL-206ENST00000623461 TMEM196Q5HYL7 178 aa7.71□□□□□ -1.17
VCL-206ENST00000623461 OR2Z1Q8NG97 314 aa7.71□□□□□ -1.17
VCL-206ENST00000623461 HIST1H4GQ99525 98 aa7.71□□□□□ -1.17
VCL-206ENST00000623461 SFXN3Q9BWM7 321 aa7.71□□□□□ -1.17
VCL-206ENST00000623461 DEFB127Q9H1M4 99 aa7.71□□□□□ -1.17
VCL-206ENST00000623461 TNFSF13O75888 250 aa7.71□□□□□ -1.18
VCL-206ENST00000623461 AREGP15514 252 aa7.71□□□□□ -1.18
VCL-206ENST00000623461 CCL11P51671 97 aa7.71□□□□□ -1.18
VCL-206ENST00000623461 KIR2DL1P43626 348 aaPredicted RBP7.71□□□□□ -1.18
VCL-206ENST00000623461 KIR2DL2P43627 348 aaPredicted RBP7.71□□□□□ -1.18
VCL-206ENST00000623461 LRRC29Q8WV35 223 aa7.71□□□□□ -1.18
VCL-206ENST00000623461 RCC1LQ96I51 464 aaKnown RBP7.71□□□□□ -1.18
VCL-206ENST00000623461 MS4A18H0YCH9 400 aa7.71□□□□□ -1.18
VCL-206ENST00000623461 ARL14EPLP0DKL9 152 aa7.71□□□□□ -1.18
VCL-206ENST00000623461 CBLN1P23435 193 aa7.71□□□□□ -1.18
VCL-206ENST00000623461 VEGFBP49765 207 aa7.71□□□□□ -1.18
VCL-206ENST00000623461 MS4A18Q3C1V0 323 aa7.71□□□□□ -1.18
VCL-206ENST00000623461 Q96M66 194 aa7.71□□□□□ -1.18
VCL-206ENST00000623461 CHODLQ9H9P2 273 aa7.71□□□□□ -1.18
VCL-206ENST00000623461 RPRMQ9NS64 109 aa7.71□□□□□ -1.18
VCL-206ENST00000623461 LOC107984156A0A0G2JMH3 177 aa7.71□□□□□ -1.18
VCL-206ENST00000623461 ICAM4Q14773 271 aa7.71□□□□□ -1.18
VCL-206ENST00000623461 C1orf194Q5T5A4 169 aa7.71□□□□□ -1.18
VCL-206ENST00000623461 ARL17AQ8IVW1 177 aa7.71□□□□□ -1.18
VCL-206ENST00000623461 ATOH7Q8N100 152 aa7.71□□□□□ -1.18
VCL-206ENST00000623461 GRAMD2BQ96HH9 432 aa7.71□□□□□ -1.18
VCL-206ENST00000623461 C14orf144Q96I85 54 aa7.71□□□□□ -1.18
VCL-206ENST00000623461 HEATR5BQ9P2D3 2071 aa7.7□□□□□ -1.18
VCL-206ENST00000623461 TRBV24-1A0A075B6N3 115 aa7.7□□□□□ -1.18
VCL-206ENST00000623461 SELENOTP62341 195 aa7.7□□□□□ -1.18
VCL-206ENST00000623461 WIPI1Q5MNZ9 446 aaPredicted RBP7.7□□□□□ -1.18
VCL-206ENST00000623461 SAXO1Q8IYX7 474 aa7.7□□□□□ -1.18
VCL-206ENST00000623461 TDHQ8IZJ6 230 aa7.7□□□□□ -1.18
VCL-206ENST00000623461 OR1L8Q8NGR8 309 aa7.7□□□□□ -1.18
VCL-206ENST00000623461 IMMP2LQ96T52 175 aa7.7□□□□□ -1.18
VCL-206ENST00000623461 UFC1Q9Y3C8 167 aa7.7□□□□□ -1.18
VCL-206ENST00000623461 SNRPCP09234 159 aaKnown RBP7.7□□□□□ -1.18
VCL-206ENST00000623461 LRRC75BQ2VPJ9 315 aa7.7□□□□□ -1.18
VCL-206ENST00000623461 ANKRD33Q7Z3H0 272 aa7.7□□□□□ -1.18
VCL-206ENST00000623461 KCNK17Q96T54 332 aa7.7□□□□□ -1.18
VCL-206ENST00000623461 AMMECR1Q9Y4X0 333 aaPredicted RBP7.7□□□□□ -1.18
VCL-206ENST00000623461 FRMPD3Q5JV73 1810 aa7.7□□□□□ -1.18
VCL-206ENST00000623461 LOC285556D6RIA3 1793 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms