RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 CLN8Q9UBY8 286 aa10□□□□□ -0.81
TP53-227ENST00000622645 PSG11Q9UQ72 335 aa10□□□□□ -0.81
TP53-227ENST00000622645 RP1L1Q8IWN7 2480 aaPredicted RBP10□□□□□ -0.81
TP53-227ENST00000622645 CHD3Q12873 2000 aaKnown RBP10□□□□□ -0.81
TP53-227ENST00000622645 MAP1BP46821 2468 aaKnown RBP10□□□□□ -0.81
TP53-227ENST00000622645 LINC00473A8K010 186 aa10□□□□□ -0.81
TP53-227ENST00000622645 IFNL4K9M1U5 179 aa10□□□□□ -0.81
TP53-227ENST00000622645 TUBG1P23258 451 aa10□□□□□ -0.81
TP53-227ENST00000622645 PRDX2P32119 198 aa10□□□□□ -0.81
TP53-227ENST00000622645 FGF8P55075 233 aaPredicted RBP10□□□□□ -0.81
TP53-227ENST00000622645 RPS16P62249 146 aaKnown RBP10□□□□□ -0.81
TP53-227ENST00000622645 ZNF726P1Q15940 193 aa10□□□□□ -0.81
TP53-227ENST00000622645 LRRC75BQ2VPJ9 315 aa10□□□□□ -0.81
TP53-227ENST00000622645 ZNF506Q5JVG8 444 aa10□□□□□ -0.81
TP53-227ENST00000622645 FAM180AQ6UWF9 173 aa10□□□□□ -0.81
TP53-227ENST00000622645 DPPA3Q6W0C5 159 aa10□□□□□ -0.81
TP53-227ENST00000622645 TUBG2Q9NRH3 451 aa10□□□□□ -0.81
TP53-227ENST00000622645 ZNF318Q5VUA4 2279 aa9.99□□□□□ -0.81
TP53-227ENST00000622645 UBE2L5PA0A1B0GUS4 154 aa9.99□□□□□ -0.81
TP53-227ENST00000622645 MBD3L4A6NDZ8 208 aaPredicted RBP9.99□□□□□ -0.81
TP53-227ENST00000622645 MBD3L3A6NE82 208 aaPredicted RBP9.99□□□□□ -0.81
TP53-227ENST00000622645 MBD3L5A6NJ08 208 aaPredicted RBP9.99□□□□□ -0.81
TP53-227ENST00000622645 ZNF891A8MT65 544 aaPredicted RBP9.99□□□□□ -0.81
TP53-227ENST00000622645 HBE1P02100 147 aa9.99□□□□□ -0.81
TP53-227ENST00000622645 P0C879 139 aa9.99□□□□□ -0.81
TP53-227ENST00000622645 RPS23P62266 143 aaKnown RBP9.99□□□□□ -0.81
TP53-227ENST00000622645 CATR1Q13166 79 aa9.99□□□□□ -0.81
TP53-227ENST00000622645 VHLLQ6RSH7 139 aa9.99□□□□□ -0.81
TP53-227ENST00000622645 ZNF474Q6S9Z5 364 aaPredicted RBP9.99□□□□□ -0.81
TP53-227ENST00000622645 BEND4Q6ZU67 534 aa9.99□□□□□ -0.81
TP53-227ENST00000622645 MBD3L2Q8NHZ7 208 aaPredicted RBP9.99□□□□□ -0.81
TP53-227ENST00000622645 S100PBPQ96BU1 408 aa9.99□□□□□ -0.81
TP53-227ENST00000622645 AGMATQ9BSE5 352 aa9.99□□□□□ -0.81
TP53-227ENST00000622645 WDR61Q9GZS3 305 aaKnown RBP9.99□□□□□ -0.81
TP53-227ENST00000622645 HIPK2Q9H2X6 1198 aa9.99□□□□□ -0.81
TP53-227ENST00000622645 ZNF665Q9H7R5 613 aa9.99□□□□□ -0.81
TP53-227ENST00000622645 HSPB7Q9UBY9 170 aa9.99□□□□□ -0.81
TP53-227ENST00000622645 IGKV1D-17A0A075B6S4 117 aa9.99□□□□□ -0.81
TP53-227ENST00000622645 IGHV3OR15-7A0A075B7D8 119 aa9.99□□□□□ -0.81
TP53-227ENST00000622645 ZFP92A6NM28 416 aa9.99□□□□□ -0.81
TP53-227ENST00000622645 LRRC30A6NM36 301 aa9.99□□□□□ -0.81
TP53-227ENST00000622645 ZNF727A8MUV8 499 aa9.99□□□□□ -0.81
TP53-227ENST00000622645 M0R1B8 84 aa9.99□□□□□ -0.81
TP53-227ENST00000622645 IGHV3-13P01766 116 aa9.99□□□□□ -0.81
TP53-227ENST00000622645 IGHV3-7P01780 117 aa9.99□□□□□ -0.81
TP53-227ENST00000622645 HSPB1P04792 205 aaKnown RBP9.99□□□□□ -0.81
TP53-227ENST00000622645 RAB5AP20339 215 aa9.99□□□□□ -0.81
TP53-227ENST00000622645 ELLP55199 621 aaPredicted RBP9.99□□□□□ -0.81
TP53-227ENST00000622645 RAB2AP61019 212 aa9.99□□□□□ -0.81
TP53-227ENST00000622645 SLC38A11Q08AI6 406 aa9.99□□□□□ -0.81
TP53-227ENST00000622645 Q3ZCU0 254 aa9.99□□□□□ -0.81
TP53-227ENST00000622645 SPINK9Q5DT21 86 aa9.99□□□□□ -0.81
TP53-227ENST00000622645 ADAM5Q6NVV9 412 aa9.99□□□□□ -0.81
TP53-227ENST00000622645 TMEM14EPQ6UXP3 125 aa9.99□□□□□ -0.81
TP53-227ENST00000622645 RBMS3Q6XE24 437 aaKnown RBP9.99□□□□□ -0.81
TP53-227ENST00000622645 ZDHHC16Q969W1 377 aa9.99□□□□□ -0.81
TP53-227ENST00000622645 RAB39BQ96DA2 213 aa9.99□□□□□ -0.81
TP53-227ENST00000622645 LURAP1Q96LR2 239 aa9.99□□□□□ -0.81
TP53-227ENST00000622645 TOLLIPQ9H0E2 274 aa9.99□□□□□ -0.81
TP53-227ENST00000622645 DOCK11Q5JSL3 2073 aa9.98□□□□□ -0.81
TP53-227ENST00000622645 ICE1Q9Y2F5 2266 aa9.98□□□□□ -0.81
TP53-227ENST00000622645 FAM90A26D6RGX4 464 aa9.98□□□□□ -0.81
TP53-227ENST00000622645 C15orf65H3BRN8 121 aa9.98□□□□□ -0.81
TP53-227ENST00000622645 PPIHO43447 177 aaKnown RBP9.98□□□□□ -0.81
TP53-227ENST00000622645 ZG16O60844 167 aa9.98□□□□□ -0.81
TP53-227ENST00000622645 ZNF737O75373 536 aa9.98□□□□□ -0.81
TP53-227ENST00000622645 MSMO1Q15800 293 aa9.98□□□□□ -0.81
TP53-227ENST00000622645 EIF2S3LQ2VIR3 472 aaKnown RBP9.98□□□□□ -0.81
TP53-227ENST00000622645 RNF212Q495C1 297 aa9.98□□□□□ -0.81
TP53-227ENST00000622645 ZNF787Q6DD87 383 aa9.98□□□□□ -0.81
TP53-227ENST00000622645 ZNF429Q86V71 674 aa9.98□□□□□ -0.81
TP53-227ENST00000622645 RCC1LQ96I51 464 aaKnown RBP9.98□□□□□ -0.81
TP53-227ENST00000622645 UNKLQ9H9P5 680 aaKnown RBP9.98□□□□□ -0.81
TP53-227ENST00000622645 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.98□□□□□ -0.81
TP53-227ENST00000622645 FAM215AQ9Y5M1 114 aa9.98□□□□□ -0.81
TP53-227ENST00000622645 TRAV1-1A0A0B4J248 108 aa9.98□□□□□ -0.81
TP53-227ENST00000622645 C5orf52A6NGY3 159 aa9.98□□□□□ -0.81
TP53-227ENST00000622645 K7EM74 188 aa9.98□□□□□ -0.81
TP53-227ENST00000622645 RBMXL2O75526 392 aaKnown RBP9.98□□□□□ -0.81
TP53-227ENST00000622645 S100A6P06703 90 aa9.98□□□□□ -0.81
TP53-227ENST00000622645 AGAP20933 346 aa9.98□□□□□ -0.81
TP53-227ENST00000622645 OR2B8PP59922 312 aa9.98□□□□□ -0.81
TP53-227ENST00000622645 CTAG1AP78358 180 aa9.98□□□□□ -0.81
TP53-227ENST00000622645 ZNRF1Q8ND25 227 aa9.98□□□□□ -0.81
TP53-227ENST00000622645 TAF15Q92804 592 aaKnown RBP eCLIP9.98□□□□□ -0.81
TP53-227ENST00000622645 PSMG3Q9BT73 122 aaPredicted RBP9.98□□□□□ -0.81
TP53-227ENST00000622645 LOC102723971A0A1B0GUV8 181 aa9.97□□□□□ -0.81
TP53-227ENST00000622645 A0A1B0GWJ7 208 aa9.97□□□□□ -0.81
TP53-227ENST00000622645 SPINT2O43291 252 aa9.97□□□□□ -0.81
TP53-227ENST00000622645 PROP1O75360 226 aa9.97□□□□□ -0.81
TP53-227ENST00000622645 OR2C1O95371 312 aa9.97□□□□□ -0.81
TP53-227ENST00000622645 TAGLN2P37802 199 aaKnown RBP9.97□□□□□ -0.81
TP53-227ENST00000622645 KHDC3LQ587J8 217 aa9.97□□□□□ -0.81
TP53-227ENST00000622645 ZNF561Q8N587 486 aa9.97□□□□□ -0.81
TP53-227ENST00000622645 GCSAMQ8N6F7 178 aa9.97□□□□□ -0.81
TP53-227ENST00000622645 OR2V2Q96R30 315 aa9.97□□□□□ -0.81
TP53-227ENST00000622645 SRRM5B3KS81 715 aa9.97□□□□□ -0.81
TP53-227ENST00000622645 DLK1P80370 383 aa9.97□□□□□ -0.81
TP53-227ENST00000622645 SERF2P84101 59 aa9.97□□□□□ -0.81
TP53-227ENST00000622645 NCR3LG1Q68D85 454 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms