RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 CTSSP25774 331 aa8.84□□□□□ -0.99
VPS11-207ENST00000620429 OR3A4PP47883 348 aa8.84□□□□□ -0.99
VPS11-207ENST00000620429 AMTP48728 403 aa8.84□□□□□ -0.99
VPS11-207ENST00000620429 ZNF154Q13106 437 aa8.84□□□□□ -0.99
VPS11-207ENST00000620429 WDR82Q6UXN9 313 aa8.84□□□□□ -0.99
VPS11-207ENST00000620429 COLCA1Q6ZS62 124 aa8.84□□□□□ -0.99
VPS11-207ENST00000620429 OR51E1Q8TCB6 317 aa8.84□□□□□ -0.99
VPS11-207ENST00000620429 RNF133Q8WVZ7 376 aa8.84□□□□□ -0.99
VPS11-207ENST00000620429 GMPPAQ96IJ6 420 aaPredicted RBP8.84□□□□□ -0.99
VPS11-207ENST00000620429 KCNS1Q96KK3 526 aa8.84□□□□□ -0.99
VPS11-207ENST00000620429 SIGMAR1Q99720 223 aa8.84□□□□□ -0.99
VPS11-207ENST00000620429 NPIPA1Q9UND3 350 aa8.84□□□□□ -0.99
VPS11-207ENST00000620429 LOC102725191A0A1B0GVB3 256 aa8.83□□□□□ -1
VPS11-207ENST00000620429 FRG2CA6NGY1 282 aa8.83□□□□□ -1
VPS11-207ENST00000620429 M0R1X1 148 aa8.83□□□□□ -1
VPS11-207ENST00000620429 TMPRSS2O15393 492 aa8.83□□□□□ -1
VPS11-207ENST00000620429 CGAP01215 116 aa8.83□□□□□ -1
VPS11-207ENST00000620429 S100GP29377 79 aa8.83□□□□□ -1
VPS11-207ENST00000620429 CEACAM3P40198 252 aa8.83□□□□□ -1
VPS11-207ENST00000620429 FOXL2P58012 376 aa8.83□□□□□ -1
VPS11-207ENST00000620429 RHOBP62745 196 aa8.83□□□□□ -1
VPS11-207ENST00000620429 HTD2P86397 168 aa8.83□□□□□ -1
VPS11-207ENST00000620429 TMEM267Q0VDI3 215 aaPredicted RBP8.83□□□□□ -1
VPS11-207ENST00000620429 DEFB133Q30KQ1 61 aa8.83□□□□□ -1
VPS11-207ENST00000620429 OR10J3Q5JRS4 329 aa8.83□□□□□ -1
VPS11-207ENST00000620429 C12orf54Q6X4T0 127 aa8.83□□□□□ -1
VPS11-207ENST00000620429 SYT13Q7L8C5 426 aa8.83□□□□□ -1
VPS11-207ENST00000620429 OR2M3Q8NG83 312 aa8.83□□□□□ -1
VPS11-207ENST00000620429 SGMS2Q8NHU3 365 aa8.83□□□□□ -1
VPS11-207ENST00000620429 SLC25A40Q8TBP6 338 aa8.83□□□□□ -1
VPS11-207ENST00000620429 ZNF721Q8TF20 911 aa8.83□□□□□ -1
VPS11-207ENST00000620429 OR5P3Q8WZ94 311 aa8.83□□□□□ -1
VPS11-207ENST00000620429 GPER1Q99527 375 aa8.83□□□□□ -1
VPS11-207ENST00000620429 CHODLQ9H9P2 273 aa8.83□□□□□ -1
VPS11-207ENST00000620429 POLR1DQ9Y2S0 133 aa8.83□□□□□ -1
VPS11-207ENST00000620429 SLC25A17O43808 307 aa8.83□□□□□ -1
VPS11-207ENST00000620429 TMEM50AO95807 157 aa8.83□□□□□ -1
VPS11-207ENST00000620429 C1QTNF9P0C862 333 aa8.83□□□□□ -1
VPS11-207ENST00000620429 RTTNQ86VV8 2226 aa8.83□□□□□ -1
VPS11-207ENST00000620429 C1orf210Q8IVY1 113 aa8.83□□□□□ -1
VPS11-207ENST00000620429 OR10P1Q8NGE3 313 aa8.83□□□□□ -1
VPS11-207ENST00000620429 SPACA9Q96E40 222 aaPredicted RBP8.83□□□□□ -1
VPS11-207ENST00000620429 LIME1Q9H400 295 aa8.83□□□□□ -1
VPS11-207ENST00000620429 MED29Q9NX70 200 aa8.83□□□□□ -1
VPS11-207ENST00000620429 KLHL13Q9P2N7 655 aa8.83□□□□□ -1
VPS11-207ENST00000620429 PTRH2Q9Y3E5 179 aaKnown RBP8.83□□□□□ -1
VPS11-207ENST00000620429 GAGE10A6NGK3 116 aa8.82□□□□□ -1
VPS11-207ENST00000620429 H0YJW9 148 aa8.82□□□□□ -1
VPS11-207ENST00000620429 CYC1P08574 325 aa8.82□□□□□ -1
VPS11-207ENST00000620429 CKS1BP61024 79 aa8.82□□□□□ -1
VPS11-207ENST00000620429 ID3Q02535 119 aa8.82□□□□□ -1
VPS11-207ENST00000620429 DMRTC1Q5HYR2 192 aa8.82□□□□□ -1
VPS11-207ENST00000620429 TCTEX1D4Q5JR98 221 aa8.82□□□□□ -1
VPS11-207ENST00000620429 PHYHD1Q5SRE7 291 aa8.82□□□□□ -1
VPS11-207ENST00000620429 HLA-DQA1Q5Y7H0 255 aa8.82□□□□□ -1
VPS11-207ENST00000620429 GTF2H5Q6ZYL4 71 aa8.82□□□□□ -1
VPS11-207ENST00000620429 ST6GALNAC3Q8NDV1 305 aa8.82□□□□□ -1
VPS11-207ENST00000620429 PLEK2Q9NYT0 353 aa8.82□□□□□ -1
VPS11-207ENST00000620429 MRPS17Q9Y2R5 130 aaKnown RBP8.82□□□□□ -1
VPS11-207ENST00000620429 SIT1Q9Y3P8 196 aa8.82□□□□□ -1
VPS11-207ENST00000620429 IGHV5-51A0A0C4DH38 117 aa8.82□□□□□ -1
VPS11-207ENST00000620429 A0A1W2PS18 150 aa8.82□□□□□ -1
VPS11-207ENST00000620429 HAND1O96004 215 aa8.82□□□□□ -1
VPS11-207ENST00000620429 SP9P0CG40 484 aa8.82□□□□□ -1
VPS11-207ENST00000620429 MYF5P13349 255 aa8.82□□□□□ -1
VPS11-207ENST00000620429 IGLL1P15814 213 aa8.82□□□□□ -1
VPS11-207ENST00000620429 CBLN1P23435 193 aa8.82□□□□□ -1
VPS11-207ENST00000620429 OPRM1P35372 400 aa8.82□□□□□ -1
VPS11-207ENST00000620429 PLCXD2Q0VAA5 305 aa8.82□□□□□ -1
VPS11-207ENST00000620429 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.82□□□□□ -1
VPS11-207ENST00000620429 TSPO2Q5TGU0 170 aa8.82□□□□□ -1
VPS11-207ENST00000620429 FAM180AQ6UWF9 173 aa8.82□□□□□ -1
VPS11-207ENST00000620429 OR5AS1Q8N127 324 aa8.82□□□□□ -1
VPS11-207ENST00000620429 LHX4Q969G2 390 aa8.82□□□□□ -1
VPS11-207ENST00000620429 CLDN23Q96B33 292 aa8.82□□□□□ -1
VPS11-207ENST00000620429 SPSB1Q96BD6 273 aa8.82□□□□□ -1
VPS11-207ENST00000620429 EAF1Q96JC9 268 aaPredicted RBP8.82□□□□□ -1
VPS11-207ENST00000620429 POM121L2Q96KW2 1035 aa8.82□□□□□ -1
VPS11-207ENST00000620429 ANXA10Q9UJ72 324 aa8.82□□□□□ -1
VPS11-207ENST00000620429 WASHC3Q9Y3C0 194 aa8.82□□□□□ -1
VPS11-207ENST00000620429 ABCA7Q8IZY2 2146 aa8.82□□□□□ -1
VPS11-207ENST00000620429 TRBV9A0A0B4J1U6 114 aa8.82□□□□□ -1
VPS11-207ENST00000620429 MS4A18H0YCH9 400 aa8.82□□□□□ -1
VPS11-207ENST00000620429 H0YIG0 161 aa8.82□□□□□ -1
VPS11-207ENST00000620429 ZNF324O75467 553 aaPredicted RBP8.82□□□□□ -1
VPS11-207ENST00000620429 CRYGCP07315 174 aa8.82□□□□□ -1
VPS11-207ENST00000620429 ZNF133P52736 654 aaPredicted RBP8.82□□□□□ -1
VPS11-207ENST00000620429 IGFBP7Q16270 282 aa8.82□□□□□ -1
VPS11-207ENST00000620429 HLA-DRB5Q30154 266 aa8.82□□□□□ -1
VPS11-207ENST00000620429 MS4A18Q3C1V0 323 aa8.82□□□□□ -1
VPS11-207ENST00000620429 OR51T1Q8NGJ9 327 aa8.82□□□□□ -1
VPS11-207ENST00000620429 OR4F5Q8NH21 305 aa8.82□□□□□ -1
VPS11-207ENST00000620429 SCGB1C1Q8TD33 95 aa8.82□□□□□ -1
VPS11-207ENST00000620429 NEIL1Q96FI4 390 aaPredicted RBP8.82□□□□□ -1
VPS11-207ENST00000620429 GNB4Q9HAV0 340 aa8.82□□□□□ -1
VPS11-207ENST00000620429 PGPEP1Q9NXJ5 209 aa8.82□□□□□ -1
VPS11-207ENST00000620429 MYO7BQ6PIF6 2116 aa8.81□□□□□ -1
VPS11-207ENST00000620429 MUC21A0A0G2JKD1 596 aa8.81□□□□□ -1
VPS11-207ENST00000620429 MUC21A0A140T8X8 626 aa8.81□□□□□ -1
VPS11-207ENST00000620429 A0A1W2PR77 199 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms