RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 TMEM41BQ5BJD5 291 aa5.96□□□□□ -1.46
SRGAP3-213ENST00000618999 DNLZQ5SXM8 178 aa5.96□□□□□ -1.46
SRGAP3-213ENST00000618999 C9orf135Q5VTT2 229 aa5.96□□□□□ -1.46
SRGAP3-213ENST00000618999 OR1P1Q8NH06 330 aa5.96□□□□□ -1.46
SRGAP3-213ENST00000618999 OR4F5Q8NH21 305 aa5.96□□□□□ -1.46
SRGAP3-213ENST00000618999 OR5R1Q8NH85 324 aa5.96□□□□□ -1.46
SRGAP3-213ENST00000618999 OR4F4Q96R69 305 aa5.96□□□□□ -1.46
SRGAP3-213ENST00000618999 GPHA2Q96T91 129 aa5.96□□□□□ -1.46
SRGAP3-213ENST00000618999 P2RX4Q99571 388 aa5.96□□□□□ -1.46
SRGAP3-213ENST00000618999 LIME1Q9H400 295 aa5.96□□□□□ -1.46
SRGAP3-213ENST00000618999 RIMS4Q9H426 269 aaPredicted RBP5.96□□□□□ -1.46
SRGAP3-213ENST00000618999 Q9N2K0 584 aa5.96□□□□□ -1.46
SRGAP3-213ENST00000618999 GLRX2Q9NS18 164 aa5.96□□□□□ -1.46
SRGAP3-213ENST00000618999 CACNG5Q9UF02 275 aa5.96□□□□□ -1.46
SRGAP3-213ENST00000618999 SYNGR2O43760 224 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 MDH2P40926 338 aaKnown RBP5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 LHX2P50458 406 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 ZNF818PQ6ZRF7 136 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 TMEM56Q96MV1 263 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 FOXB1Q99853 325 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 HIST1H2BLQ99880 126 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 CRIM1Q9NZV1 1036 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 TMEM56-RWDD3S4R434 201 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 A0A1B0GU03 582 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 UBE2L5PA0A1B0GUS4 154 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 H0Y980 276 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 ZNHIT1O43257 154 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 CST2P09228 141 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 MALP21145 153 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 MFAP4P55083 255 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 PLP2Q04941 152 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 CEACAM16Q2WEN9 425 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 C16orf82Q7Z2V1 217 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 SSC4DQ8WTU2 575 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 RDH5Q92781 318 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 SRD5A3Q9H8P0 318 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 RPRMQ9NS64 109 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 OR14J1Q9UGF5 321 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 MKRN2OSH3BPM6 223 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 HS3ST1O14792 307 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 GCGP01275 180 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 MBP02144 154 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 SERF2P84101 59 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 MSMO1Q15800 293 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 CDPF1Q6NVV7 123 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 C11orf44Q8N8P7 122 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 ZIC4Q8N9L1 334 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 OR5D13Q8NGL4 314 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 OR10G4Q8NGN3 311 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 TMEM54Q969K7 222 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 RAX2Q96IS3 184 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 PRDM13Q9H4Q3 707 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 TMEM242Q9NWH2 141 aa5.95□□□□□ -1.46
SRGAP3-213ENST00000618999 SCTP09683 121 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 NDUFB7P17568 137 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 UCP1P25874 307 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 CCKARP32238 428 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 CLDN18P56856 261 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 FAM3BP58499 235 aaPredicted RBP5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 TLE1Q04724 770 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 WDR25Q64LD2 544 aaPredicted RBP5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 ZNF705AQ6ZN79 300 aaPredicted RBP5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 TGIF2LXQ8IUE1 241 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 ADGRG7Q96K78 797 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 SCRT1Q9BWW7 348 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 SDF2L1Q9HCN8 221 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 ZNF581Q9P0T4 197 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 ERRFI1Q9UJM3 462 aaPredicted RBP5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 PPP1R3CQ9UQK1 317 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 CLEC18AA5D8T8 446 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 ANKRD30BLA7E2S9 258 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 RNF212BA8MTL3 300 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 HMGB3O15347 200 aaKnown RBP5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 WDR1O75083 606 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 F2RP25116 425 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 GPM6AP51674 278 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 RPL19P84098 196 aaKnown RBP5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 JOSD1Q15040 202 aaPredicted RBP5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 HIST3H3Q16695 136 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 PHYHD1Q5SRE7 291 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 ZDHHC23Q8IYP9 409 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 CLEC18CQ8NCF0 446 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 OR56B2PQ8NGI1 322 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 OR2T10Q8NGZ9 312 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 IL22RA2Q969J5 263 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 LIN7CQ9NUP9 197 aaKnown RBP5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 FUT9Q9Y231 359 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 TRBV24-1A0A075B6N3 115 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 SLC22A20A6NK97 555 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 SPCS3P61009 180 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 ZNF92Q03936 586 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 SLC38A11Q08AI6 406 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 CST9LP1Q5W188 147 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 SPACA3Q8IXA5 215 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 OR4X1Q8NH49 305 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 ACY3Q96HD9 319 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 ACTR3CQ9C0K3 210 aaPredicted RBP5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 SLC25A22Q9H936 323 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 TMEM38BQ9NVV0 291 aa5.94□□□□□ -1.46
SRGAP3-213ENST00000618999 IL36GQ9NZH8 169 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms