RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 C11orf87Q6NUJ2 197 aa13.85□□□□□ -0.19
TRAPPC3-210ENST00000617904 HEPN1Q6WQI6 88 aa13.85□□□□□ -0.19
TRAPPC3-210ENST00000617904 C5orf24Q7Z6I8 188 aa13.85□□□□□ -0.19
TRAPPC3-210ENST00000617904 ZNF546Q86UE3 836 aa13.85□□□□□ -0.19
TRAPPC3-210ENST00000617904 PPP1R1CQ8WVI7 109 aa13.85□□□□□ -0.19
TRAPPC3-210ENST00000617904 TCTEX1D2Q8WW35 142 aa13.85□□□□□ -0.19
TRAPPC3-210ENST00000617904 MSI2Q96DH6 328 aaKnown RBP13.85□□□□□ -0.19
TRAPPC3-210ENST00000617904 GON7Q9BXV9 100 aa13.85□□□□□ -0.19
TRAPPC3-210ENST00000617904 ABCA2Q9BZC7 2435 aa13.84□□□□□ -0.19
TRAPPC3-210ENST00000617904 A0A0D9SG52 128 aa13.84□□□□□ -0.19
TRAPPC3-210ENST00000617904 LYNX1G3V0Z9 82 aa13.84□□□□□ -0.19
TRAPPC3-210ENST00000617904 LYNX1P0DP58 116 aa13.84□□□□□ -0.19
TRAPPC3-210ENST00000617904 PVALBP20472 110 aaPredicted RBP13.84□□□□□ -0.19
TRAPPC3-210ENST00000617904 CDKN1AP38936 164 aa13.84□□□□□ -0.19
TRAPPC3-210ENST00000617904 PDLIM4P50479 330 aa13.84□□□□□ -0.19
TRAPPC3-210ENST00000617904 GNB2P62879 340 aa13.84□□□□□ -0.19
TRAPPC3-210ENST00000617904 TMEM200BQ69YZ2 307 aa13.84□□□□□ -0.19
TRAPPC3-210ENST00000617904 TMEM65Q6PI78 240 aa13.84□□□□□ -0.19
TRAPPC3-210ENST00000617904 CLEC9AQ6UXN8 241 aa13.84□□□□□ -0.19
TRAPPC3-210ENST00000617904 LRRC75A-AS1Q8N1F1 130 aa13.84□□□□□ -0.19
TRAPPC3-210ENST00000617904 SLA2Q9H6Q3 261 aa13.84□□□□□ -0.19
TRAPPC3-210ENST00000617904 RNF150Q9ULK6 438 aa13.84□□□□□ -0.19
TRAPPC3-210ENST00000617904 PLCE1Q9P212 2302 aa13.83□□□□□ -0.2
TRAPPC3-210ENST00000617904 A0A1B0GW55 424 aa13.83□□□□□ -0.2
TRAPPC3-210ENST00000617904 RBP4P02753 201 aa13.83□□□□□ -0.2
TRAPPC3-210ENST00000617904 DUX4L2P0CJ85 424 aa13.83□□□□□ -0.2
TRAPPC3-210ENST00000617904 DUX4L3P0CJ86 424 aa13.83□□□□□ -0.2
TRAPPC3-210ENST00000617904 DUX4L4P0CJ87 422 aa13.83□□□□□ -0.2
TRAPPC3-210ENST00000617904 DUX4L5P0CJ88 424 aa13.83□□□□□ -0.2
TRAPPC3-210ENST00000617904 DUX4L6P0CJ89 424 aa13.83□□□□□ -0.2
TRAPPC3-210ENST00000617904 DUX4L7P0CJ90 424 aa13.83□□□□□ -0.2
TRAPPC3-210ENST00000617904 SLC25A6P12236 298 aa13.83□□□□□ -0.2
TRAPPC3-210ENST00000617904 AKR1C2P52895 323 aa13.83□□□□□ -0.2
TRAPPC3-210ENST00000617904 LOXL3P58215 753 aa13.83□□□□□ -0.2
TRAPPC3-210ENST00000617904 TAGLNQ01995 201 aaKnown RBP13.83□□□□□ -0.2
TRAPPC3-210ENST00000617904 LRRC37A5PQ49AS3 106 aa13.83□□□□□ -0.2
TRAPPC3-210ENST00000617904 Q5PR19 223 aa13.83□□□□□ -0.2
TRAPPC3-210ENST00000617904 AVPI1Q5T686 147 aa13.83□□□□□ -0.2
TRAPPC3-210ENST00000617904 DUX4L9Q6RFH8 374 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC3-210ENST00000617904 FAM219AQ8IW50 185 aa13.83□□□□□ -0.2
TRAPPC3-210ENST00000617904 SELENOHQ8IZQ5 122 aaKnown RBP13.83□□□□□ -0.2
TRAPPC3-210ENST00000617904 SLC35G3Q8N808 338 aa13.83□□□□□ -0.2
TRAPPC3-210ENST00000617904 C8orf31Q8N9H6 132 aa13.83□□□□□ -0.2
TRAPPC3-210ENST00000617904 ZBTB8BQ8NAP8 495 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC3-210ENST00000617904 ABHD14BQ96IU4 210 aa13.83□□□□□ -0.2
TRAPPC3-210ENST00000617904 AIFM2Q9BRQ8 373 aa13.83□□□□□ -0.2
TRAPPC3-210ENST00000617904 PATZ1Q9HBE1 687 aaKnown RBP13.83□□□□□ -0.2
TRAPPC3-210ENST00000617904 C19orf12Q9NSK7 152 aa13.83□□□□□ -0.2
TRAPPC3-210ENST00000617904 DUX4Q9UBX2 424 aa13.83□□□□□ -0.2
TRAPPC3-210ENST00000617904 CACFD1Q9UGQ2 172 aa13.83□□□□□ -0.2
TRAPPC3-210ENST00000617904 ST8SIA5O15466 376 aa13.82□□□□□ -0.2
TRAPPC3-210ENST00000617904 OR2F2O95006 317 aa13.82□□□□□ -0.2
TRAPPC3-210ENST00000617904 MPC2O95563 127 aa13.82□□□□□ -0.2
TRAPPC3-210ENST00000617904 LIPFP07098 398 aa13.82□□□□□ -0.2
TRAPPC3-210ENST00000617904 THBS3P49746 956 aa13.82□□□□□ -0.2
TRAPPC3-210ENST00000617904 S100A10P60903 97 aa13.82□□□□□ -0.2
TRAPPC3-210ENST00000617904 OR2F1Q13607 317 aa13.82□□□□□ -0.2
TRAPPC3-210ENST00000617904 CIARTQ8N365 385 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC3-210ENST00000617904 TNFRSF14Q92956 283 aa13.82□□□□□ -0.2
TRAPPC3-210ENST00000617904 LSM10Q969L4 123 aaKnown RBP13.82□□□□□ -0.2
TRAPPC3-210ENST00000617904 MFFQ9GZY8 342 aa13.82□□□□□ -0.2
TRAPPC3-210ENST00000617904 CTSZQ9UBR2 303 aa13.82□□□□□ -0.2
TRAPPC3-210ENST00000617904 ARID1AO14497 2285 aa13.82□□□□□ -0.2
TRAPPC3-210ENST00000617904 PPIAL4CA0A0B4J2A2 164 aa13.81□□□□□ -0.2
TRAPPC3-210ENST00000617904 A0A1B0GU03 582 aa13.81□□□□□ -0.2
TRAPPC3-210ENST00000617904 WRBO00258 174 aa13.81□□□□□ -0.2
TRAPPC3-210ENST00000617904 TOR1AO14656 332 aa13.81□□□□□ -0.2
TRAPPC3-210ENST00000617904 ARPC5O15511 151 aa13.81□□□□□ -0.2
TRAPPC3-210ENST00000617904 ST8SIA3O43173 380 aa13.81□□□□□ -0.2
TRAPPC3-210ENST00000617904 LY6G6DO95868 133 aa13.81□□□□□ -0.2
TRAPPC3-210ENST00000617904 PPIAL4GP0DN37 164 aa13.81□□□□□ -0.2
TRAPPC3-210ENST00000617904 OMGP23515 440 aa13.81□□□□□ -0.2
TRAPPC3-210ENST00000617904 PRRX1P54821 245 aa13.81□□□□□ -0.2
TRAPPC3-210ENST00000617904 PRAMEF5Q5TYX0 476 aa13.81□□□□□ -0.2
TRAPPC3-210ENST00000617904 WDR25Q64LD2 544 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC3-210ENST00000617904 PRSS54Q6PEW0 395 aa13.81□□□□□ -0.2
TRAPPC3-210ENST00000617904 LYZL2Q7Z4W2 148 aa13.81□□□□□ -0.2
TRAPPC3-210ENST00000617904 C9orf62Q8N4C0 152 aa13.81□□□□□ -0.2
TRAPPC3-210ENST00000617904 DCUN1D4Q92564 292 aa13.81□□□□□ -0.2
TRAPPC3-210ENST00000617904 WDR89Q96FK6 387 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC3-210ENST00000617904 SSBP3Q9BWW4 388 aaPredicted RBP13.81□□□□□ -0.2
TRAPPC3-210ENST00000617904 ZC4H2Q9NQZ6 224 aa13.81□□□□□ -0.2
TRAPPC3-210ENST00000617904 SDHAF2Q9NX18 166 aa13.81□□□□□ -0.2
TRAPPC3-210ENST00000617904 PRR13Q9NZ81 148 aa13.81□□□□□ -0.2
TRAPPC3-210ENST00000617904 SESN1Q9Y6P5 492 aa13.81□□□□□ -0.2
TRAPPC3-210ENST00000617904 FN1P02751 2386 aaKnown RBP13.81□□□□□ -0.2
TRAPPC3-210ENST00000617904 RAI1Q7Z5J4 1906 aaPredicted RBP13.8□□□□□ -0.2
TRAPPC3-210ENST00000617904 MEX3AA1L020 520 aaKnown RBP13.8□□□□□ -0.2
TRAPPC3-210ENST00000617904 M0R1X1 148 aa13.8□□□□□ -0.2
TRAPPC3-210ENST00000617904 OVOL3O00110 214 aa13.8□□□□□ -0.2
TRAPPC3-210ENST00000617904 NDUFS8O00217 210 aa13.8□□□□□ -0.2
TRAPPC3-210ENST00000617904 SCGB1D2O95969 90 aa13.8□□□□□ -0.2
TRAPPC3-210ENST00000617904 ERVK-16P61578 105 aa13.8□□□□□ -0.2
TRAPPC3-210ENST00000617904 ZNF273Q14593 569 aa13.8□□□□□ -0.2
TRAPPC3-210ENST00000617904 PRSS57Q6UWY2 283 aa13.8□□□□□ -0.2
TRAPPC3-210ENST00000617904 SLC25A48Q6ZT89 311 aaKnown RBP13.8□□□□□ -0.2
TRAPPC3-210ENST00000617904 ACOT7LQ6ZUV0 252 aa13.8□□□□□ -0.2
TRAPPC3-210ENST00000617904 SPAG16Q8N0X2 631 aa13.8□□□□□ -0.2
TRAPPC3-210ENST00000617904 LYG1Q8N1E2 194 aa13.8□□□□□ -0.2
TRAPPC3-210ENST00000617904 C8orf46Q8TAG6 207 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms