RNA–Protein interactions for RNA: ENST00000617451.4

PTPRF-216, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5 BASIC

Gene PTPRF, Length 1,129 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-216ENST00000617451 SETD6Q8TBK2 473 aa19.15■□□□□ 0.66
PTPRF-216ENST00000617451 PHYHIPQ92561 330 aa19.15■□□□□ 0.66
PTPRF-216ENST00000617451 CLCC1Q96S66 551 aa19.15■□□□□ 0.66
PTPRF-216ENST00000617451 TM2D3Q9BRN9 247 aa19.15■□□□□ 0.66
PTPRF-216ENST00000617451 SLA2Q9H6Q3 261 aa19.15■□□□□ 0.66
PTPRF-216ENST00000617451 C8orf4Q9NR00 106 aa19.15■□□□□ 0.66
PTPRF-216ENST00000617451 PLCXD1Q9NUJ7 323 aa19.15■□□□□ 0.66
PTPRF-216ENST00000617451 METTL1Q9UBP6 276 aaKnown RBP19.15■□□□□ 0.66
PTPRF-216ENST00000617451 TRBV6-6A0A0A6YYG2 114 aa19.14■□□□□ 0.65
PTPRF-216ENST00000617451 GNAO1P09471 354 aa19.14■□□□□ 0.65
PTPRF-216ENST00000617451 SNRPBP14678 240 aaKnown RBP19.14■□□□□ 0.65
PTPRF-216ENST00000617451 CD40LGP29965 261 aa19.14■□□□□ 0.65
PTPRF-216ENST00000617451 QRFPP83859 136 aa19.14■□□□□ 0.65
PTPRF-216ENST00000617451 PSG5Q15238 335 aa19.14■□□□□ 0.65
PTPRF-216ENST00000617451 Q8N1Y9 231 aa19.14■□□□□ 0.65
PTPRF-216ENST00000617451 MS4A15Q8N5U1 240 aa19.14■□□□□ 0.65
PTPRF-216ENST00000617451 C11orf54Q9H0W9 315 aaPredicted RBP19.14■□□□□ 0.65
PTPRF-216ENST00000617451 RIMS4Q9H426 269 aaPredicted RBP19.14■□□□□ 0.65
PTPRF-216ENST00000617451 KCNK15Q9H427 330 aa19.14■□□□□ 0.65
PTPRF-216ENST00000617451 PLEKHJ1Q9NW61 149 aa19.14■□□□□ 0.65
PTPRF-216ENST00000617451 EPPK1P58107 5090 aaKnown RBP19.14■□□□□ 0.65
PTPRF-216ENST00000617451 A0A0A6YYD4 124 aa19.13■□□□□ 0.65
PTPRF-216ENST00000617451 TMEM14DPA8MWL7 114 aa19.13■□□□□ 0.65
PTPRF-216ENST00000617451 PROP1O75360 226 aa19.13■□□□□ 0.65
PTPRF-216ENST00000617451 TFAP2AP05549 437 aa19.13■□□□□ 0.65
PTPRF-216ENST00000617451 CD37P11049 281 aa19.13■□□□□ 0.65
PTPRF-216ENST00000617451 EDARADDQ8WWZ3 215 aa19.13■□□□□ 0.65
PTPRF-216ENST00000617451 ELOVL1Q9BW60 279 aa19.13■□□□□ 0.65
PTPRF-216ENST00000617451 PALMDQ9NP74 551 aa19.13■□□□□ 0.65
PTPRF-216ENST00000617451 OR1A1Q9P1Q5 309 aa19.13■□□□□ 0.65
PTPRF-216ENST00000617451 LDLRAD4O15165 306 aa19.12■□□□□ 0.65
PTPRF-216ENST00000617451 SLC22A1O15245 554 aa19.12■□□□□ 0.65
PTPRF-216ENST00000617451 CA2P00918 260 aa19.12■□□□□ 0.65
PTPRF-216ENST00000617451 IGLV1-51P01701 117 aa19.12■□□□□ 0.65
PTPRF-216ENST00000617451 IGHV4-30-4P0DP06 118 aa19.12■□□□□ 0.65
PTPRF-216ENST00000617451 ZBTB25P24278 435 aa19.12■□□□□ 0.65
PTPRF-216ENST00000617451 CEACAM6P40199 344 aa19.12■□□□□ 0.65
PTPRF-216ENST00000617451 RBM48Q5RL73 367 aaKnown RBP19.12■□□□□ 0.65
PTPRF-216ENST00000617451 HAPLN4Q86UW8 402 aa19.12■□□□□ 0.65
PTPRF-216ENST00000617451 C8orf59Q8N0T1 100 aaPredicted RBP19.12■□□□□ 0.65
PTPRF-216ENST00000617451 DRAXINQ8NBI3 349 aaPredicted RBP19.12■□□□□ 0.65
PTPRF-216ENST00000617451 FBLIM1Q8WUP2 373 aa19.12■□□□□ 0.65
PTPRF-216ENST00000617451 FKBP14Q9NWM8 211 aa19.12■□□□□ 0.65
PTPRF-216ENST00000617451 STUB1Q9UNE7 303 aa19.12■□□□□ 0.65
PTPRF-216ENST00000617451 HSPA12AO43301 675 aa19.11■□□□□ 0.65
PTPRF-216ENST00000617451 SPDEFO95238 335 aa19.11■□□□□ 0.65
PTPRF-216ENST00000617451 TRGV3P03979 118 aa19.11■□□□□ 0.65
PTPRF-216ENST00000617451 IGKV1-16P04430 117 aa19.11■□□□□ 0.65
PTPRF-216ENST00000617451 CPEP16870 476 aa19.11■□□□□ 0.65
PTPRF-216ENST00000617451 BPIFB6Q8NFQ5 453 aa19.11■□□□□ 0.65
PTPRF-216ENST00000617451 PTX4Q96A99 478 aa19.11■□□□□ 0.65
PTPRF-216ENST00000617451 TSNAXQ99598 290 aaKnown RBP19.11■□□□□ 0.65
PTPRF-216ENST00000617451 HDHD3Q9BSH5 251 aaPredicted RBP19.11■□□□□ 0.65
PTPRF-216ENST00000617451 C19orf73Q9NVV2 129 aa19.11■□□□□ 0.65
PTPRF-216ENST00000617451 GAR1Q9NY12 217 aaKnown RBP19.11■□□□□ 0.65
PTPRF-216ENST00000617451 AK3Q9UIJ7 227 aa19.11■□□□□ 0.65
PTPRF-216ENST00000617451 LCE6AA0A183 80 aa19.1■□□□□ 0.65
PTPRF-216ENST00000617451 A8MZ25 164 aa19.1■□□□□ 0.65
PTPRF-216ENST00000617451 BPNT1O95861 308 aa19.1■□□□□ 0.65
PTPRF-216ENST00000617451 SRMP19623 302 aa19.1■□□□□ 0.65
PTPRF-216ENST00000617451 HLA-DRB3P79483 266 aa19.1■□□□□ 0.65
PTPRF-216ENST00000617451 ANKRD13BQ86YJ7 626 aa19.1■□□□□ 0.65
PTPRF-216ENST00000617451 ZNF383Q8NA42 475 aa19.1■□□□□ 0.65
PTPRF-216ENST00000617451 TMED9Q9BVK6 235 aa19.1■□□□□ 0.65
PTPRF-216ENST00000617451 LPAR5Q9H1C0 372 aa19.1■□□□□ 0.65
PTPRF-216ENST00000617451 SOCS1O15524 211 aa19.09■□□□□ 0.65
PTPRF-216ENST00000617451 LINC00205P59089 165 aa19.09■□□□□ 0.65
PTPRF-216ENST00000617451 RPS16P62249 146 aaKnown RBP19.09■□□□□ 0.65
PTPRF-216ENST00000617451 RANGRFQ9HD47 186 aaPredicted RBP19.09■□□□□ 0.65
PTPRF-216ENST00000617451 MGAT4AQ9UM21 535 aa19.09■□□□□ 0.65
PTPRF-216ENST00000617451 SCTP09683 121 aa19.08■□□□□ 0.64
PTPRF-216ENST00000617451 FXYD3Q14802 87 aa19.08■□□□□ 0.64
PTPRF-216ENST00000617451 HSD17B12Q53GQ0 312 aa19.08■□□□□ 0.64
PTPRF-216ENST00000617451 RNLSQ5VYX0 342 aa19.08■□□□□ 0.64
PTPRF-216ENST00000617451 CEACAM19Q7Z692 300 aa19.08■□□□□ 0.64
PTPRF-216ENST00000617451 FAM89BQ8N5H3 189 aa19.08■□□□□ 0.64
PTPRF-216ENST00000617451 POC5Q8NA72 575 aa19.08■□□□□ 0.64
PTPRF-216ENST00000617451 OR6M1Q8NGM8 313 aa19.08■□□□□ 0.64
PTPRF-216ENST00000617451 GRPEL2Q8TAA5 225 aa19.08■□□□□ 0.64
PTPRF-216ENST00000617451 RSRP1Q9BUV0 290 aa19.08■□□□□ 0.64
PTPRF-216ENST00000617451 EDA2RQ9HAV5 297 aa19.08■□□□□ 0.64
PTPRF-216ENST00000617451 Q9N2K0 584 aa19.08■□□□□ 0.64
PTPRF-216ENST00000617451 ZNF221Q9UK13 617 aa19.08■□□□□ 0.64
PTPRF-216ENST00000617451 H3BUA1 57 aa19.07■□□□□ 0.64
PTPRF-216ENST00000617451 ZP3P21754 424 aa19.07■□□□□ 0.64
PTPRF-216ENST00000617451 ZFAND6Q6FIF0 208 aa19.07■□□□□ 0.64
PTPRF-216ENST00000617451 PDPNQ86YL7 162 aa19.07■□□□□ 0.64
PTPRF-216ENST00000617451 SGPP2Q8IWX5 399 aa19.07■□□□□ 0.64
PTPRF-216ENST00000617451 URM1Q9BTM9 101 aaKnown RBP19.07■□□□□ 0.64
PTPRF-216ENST00000617451 MND1Q9BWT6 205 aa19.07■□□□□ 0.64
PTPRF-216ENST00000617451 ZNF355PQ9NSJ1 428 aa19.07■□□□□ 0.64
PTPRF-216ENST00000617451 HSF4Q9ULV5 492 aa19.07■□□□□ 0.64
PTPRF-216ENST00000617451 BIRC6Q9NR09 4857 aa19.06■□□□□ 0.64
PTPRF-216ENST00000617451 C13orf42A0A1B0GVH6 325 aa19.06■□□□□ 0.64
PTPRF-216ENST00000617451 FOXI3A8MTJ6 420 aaPredicted RBP19.06■□□□□ 0.64
PTPRF-216ENST00000617451 SLC25A17O43808 307 aa19.06■□□□□ 0.64
PTPRF-216ENST00000617451 UCHL1P09936 223 aa19.06■□□□□ 0.64
PTPRF-216ENST00000617451 SSBP2P81877 361 aaPredicted RBP19.06■□□□□ 0.64
PTPRF-216ENST00000617451 KLF5Q13887 457 aaPredicted RBP19.06■□□□□ 0.64
PTPRF-216ENST00000617451 OR5T1Q8NG75 326 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms