RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 NGBQ9NPG2 151 aa4.8□□□□□ -1.64
SYNCRIP-204ENST00000616122 DECR2Q9NUI1 292 aa4.8□□□□□ -1.64
SYNCRIP-204ENST00000616122 HELZ2Q9BYK8 2649 aaKnown RBP4.8□□□□□ -1.64
SYNCRIP-204ENST00000616122 ZNF705GA8MUZ8 300 aaPredicted RBP4.8□□□□□ -1.64
SYNCRIP-204ENST00000616122 SCAF4O95104 1147 aaKnown RBP4.8□□□□□ -1.64
SYNCRIP-204ENST00000616122 SP9P0CG40 484 aa4.8□□□□□ -1.64
SYNCRIP-204ENST00000616122 BCL2P10415 239 aa4.8□□□□□ -1.64
SYNCRIP-204ENST00000616122 TNFRSF1AP19438 455 aa4.8□□□□□ -1.64
SYNCRIP-204ENST00000616122 ANOS1P23352 680 aa4.8□□□□□ -1.64
SYNCRIP-204ENST00000616122 MRPS11P82912 194 aaKnown RBP4.8□□□□□ -1.64
SYNCRIP-204ENST00000616122 OR10G4Q8NGN3 311 aa4.8□□□□□ -1.64
SYNCRIP-204ENST00000616122 OR10G9Q8NGN4 311 aa4.8□□□□□ -1.64
SYNCRIP-204ENST00000616122 OR10G7Q8NGN6 311 aa4.8□□□□□ -1.64
SYNCRIP-204ENST00000616122 OR1A1Q9P1Q5 309 aa4.8□□□□□ -1.64
SYNCRIP-204ENST00000616122 AGFG2O95081 481 aa4.8□□□□□ -1.64
SYNCRIP-204ENST00000616122 TMEM50AO95807 157 aa4.8□□□□□ -1.64
SYNCRIP-204ENST00000616122 HBZP02008 142 aa4.8□□□□□ -1.64
SYNCRIP-204ENST00000616122 TIGITQ495A1 244 aa4.8□□□□□ -1.64
SYNCRIP-204ENST00000616122 BCL2L2Q92843 193 aaPredicted RBP4.8□□□□□ -1.64
SYNCRIP-204ENST00000616122 SPSB4Q96A44 273 aa4.8□□□□□ -1.64
SYNCRIP-204ENST00000616122 MALSU1Q96EH3 234 aa4.8□□□□□ -1.64
SYNCRIP-204ENST00000616122 PATZ1Q9HBE1 687 aaKnown RBP4.8□□□□□ -1.64
SYNCRIP-204ENST00000616122 DOK5Q9P104 306 aa4.8□□□□□ -1.64
SYNCRIP-204ENST00000616122 MRPS18CQ9Y3D5 142 aaKnown RBP4.8□□□□□ -1.64
SYNCRIP-204ENST00000616122 TRGV10A0A0A0MS01 117 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 PQLC2LA1A4F0 135 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 ODAMA1E959 279 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 GALR2O43603 387 aaPredicted RBP4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 SOX15O60248 233 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 FTH1P19P0C7X4 201 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 CTRB1P17538 263 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 GLIPR1P48060 266 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 ERVS71-1P61550 626 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 TMEM241Q24JQ0 296 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 CTRB2Q6GPI1 263 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 ZNF66Q6ZN08 573 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 HIST1H2BAQ96A08 127 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 RCC1LQ96I51 464 aaKnown RBP4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 BTF3L4Q96K17 158 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 HS3ST6Q96QI5 342 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 TMEM147Q9BVK8 224 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 AP4M1O00189 453 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 PHOX2AO14813 284 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 TGOLN2O43493 480 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 RD3LP0DJH9 198 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 KLF3P57682 345 aaPredicted RBP4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 NCMAPQ5T1S8 102 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 TMEM56Q96MV1 263 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 RSRP1Q9BUV0 290 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 TMEM56-RWDD3S4R434 201 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 PLXNA2O75051 1894 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 LOC105371267A0A1B0GV96 52 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 LRRC30A6NM36 301 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 PRR33A8MZF0 331 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 MMP9P14780 707 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 CD81P60033 236 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 DHRS7BQ6IAN0 325 aaPredicted RBP4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 ASCL4Q6XD76 172 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 DTX1Q86Y01 620 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 SCCPDHQ8NBX0 429 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 TAF15Q92804 592 aaKnown RBP eCLIP4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 NEIL1Q96FI4 390 aaPredicted RBP4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 TOLLIPQ9H0E2 274 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 OR6C3Q9NZP0 311 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 TRAV24A0A0B4J272 114 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 A8MXE2 369 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 M0R1B8 84 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 WNT9BO14905 357 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 OR7C2O60412 319 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 DKK1O94907 266 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 LY86O95711 162 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 CRYABP02511 175 aaKnown RBP4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 OPN1MWP04001 364 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 ADH4P08319 380 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 OPN1MW2P0DN77 364 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 OPN1MW3P0DN78 364 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 G6PCP35575 357 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 CASP6P55212 293 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 CCL8P80075 99 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 ATP6V1FQ16864 119 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 ACOT6Q3I5F7 207 aaPredicted RBP4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 SPINK9Q5DT21 86 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 SELENOHQ8IZQ5 122 aaKnown RBP4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 OR8G5Q8NG78 346 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 OR52L2PQ8NGH6 319 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 OR5D13Q8NGL4 314 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 OR10D4PQ8NGN7 298 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 H1FXQ92522 213 aaKnown RBP4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 UHRF2Q96PU4 802 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 GPR61Q9BZJ8 451 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 TMPRSS5Q9H3S3 457 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 SERTAD4Q9NUC0 356 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 CTXND1A0A1B0GTU2 59 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 HRASP01112 189 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 PRDX2P32119 198 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 CHRNA7P36544 502 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 CDC34P49427 236 aaPredicted RBP4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 LINC00518Q8N0U6 118 aa4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 CISD2Q8N5K1 135 aaKnown RBP4.79□□□□□ -1.64
SYNCRIP-204ENST00000616122 R3HDM4Q96D70 268 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms