RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 SPSB4Q96A44 273 aa10.99□□□□□ -0.65
TCF4-248ENST00000616053 STARD10Q9Y365 291 aa10.99□□□□□ -0.65
TCF4-248ENST00000616053 F11RQ9Y624 299 aaKnown RBP10.99□□□□□ -0.65
TCF4-248ENST00000616053 TSPAN2O60636 221 aa10.99□□□□□ -0.65
TCF4-248ENST00000616053 LINC00869P0C866 280 aa10.99□□□□□ -0.65
TCF4-248ENST00000616053 HOXA5P20719 270 aa10.99□□□□□ -0.65
TCF4-248ENST00000616053 CDK5R1Q15078 307 aa10.99□□□□□ -0.65
TCF4-248ENST00000616053 MRM1Q6IN84 353 aaKnown RBP10.99□□□□□ -0.65
TCF4-248ENST00000616053 UQCC3Q6UW78 93 aa10.99□□□□□ -0.65
TCF4-248ENST00000616053 REG1AP05451 166 aa10.99□□□□□ -0.65
TCF4-248ENST00000616053 COLCA1Q6ZS62 124 aa10.99□□□□□ -0.65
TCF4-248ENST00000616053 YBX2Q9Y2T7 364 aaKnown RBP10.99□□□□□ -0.65
TCF4-248ENST00000616053 MYOFQ9NZM1 2061 aa10.99□□□□□ -0.65
TCF4-248ENST00000616053 B4DEV8 164 aa10.99□□□□□ -0.65
TCF4-248ENST00000616053 FAM214BQ7L5A3 538 aa10.99□□□□□ -0.65
TCF4-248ENST00000616053 OR2K2Q8NGT1 345 aa10.99□□□□□ -0.65
TCF4-248ENST00000616053 REPIN1Q9BWE0 567 aaKnown RBP10.99□□□□□ -0.65
TCF4-248ENST00000616053 RNF114Q9Y508 228 aa10.99□□□□□ -0.65
TCF4-248ENST00000616053 CFDP00746 253 aaPredicted RBP10.99□□□□□ -0.65
TCF4-248ENST00000616053 ACVR1Q04771 509 aa10.99□□□□□ -0.65
TCF4-248ENST00000616053 OR4D5Q8NGN0 318 aa10.99□□□□□ -0.65
TCF4-248ENST00000616053 CHST5Q9GZS9 411 aa10.99□□□□□ -0.65
TCF4-248ENST00000616053 SYNGR3O43761 229 aa10.98□□□□□ -0.65
TCF4-248ENST00000616053 IL24Q13007 206 aa10.98□□□□□ -0.65
TCF4-248ENST00000616053 MRGPRFQ96AM1 343 aa10.98□□□□□ -0.65
TCF4-248ENST00000616053 MARS2Q96GW9 593 aaKnown RBP10.98□□□□□ -0.65
TCF4-248ENST00000616053 TMEM204Q9BSN7 226 aa10.98□□□□□ -0.65
TCF4-248ENST00000616053 IQGAP1P46940 1657 aa10.98□□□□□ -0.65
TCF4-248ENST00000616053 SPATA31D1Q6ZQQ2 1576 aa10.98□□□□□ -0.65
TCF4-248ENST00000616053 IGHV3-11P01762 117 aa10.98□□□□□ -0.65
TCF4-248ENST00000616053 IL13RA2Q14627 380 aa10.98□□□□□ -0.65
TCF4-248ENST00000616053 CLEC18BQ6UXF7 455 aa10.98□□□□□ -0.65
TCF4-248ENST00000616053 PGLYRP4Q96LB8 373 aa10.98□□□□□ -0.65
TCF4-248ENST00000616053 DUSP21Q9H596 190 aa10.98□□□□□ -0.65
TCF4-248ENST00000616053 PEX7O00628 323 aa10.98□□□□□ -0.65
TCF4-248ENST00000616053 RPL35AP18077 110 aaKnown RBP10.98□□□□□ -0.65
TCF4-248ENST00000616053 TSPAN7P41732 249 aa10.98□□□□□ -0.65
TCF4-248ENST00000616053 GLDNQ6ZMI3 551 aaPredicted RBP10.98□□□□□ -0.65
TCF4-248ENST00000616053 IL19Q9UHD0 177 aa10.98□□□□□ -0.65
TCF4-248ENST00000616053 MYO5AQ9Y4I1 1855 aaKnown RBP10.98□□□□□ -0.65
TCF4-248ENST00000616053 OR4C45A6NMZ5 311 aa10.98□□□□□ -0.65
TCF4-248ENST00000616053 SELENOPP49908 381 aa10.98□□□□□ -0.65
TCF4-248ENST00000616053 POLR2GP62487 172 aaKnown RBP eCLIP10.98□□□□□ -0.65
TCF4-248ENST00000616053 NEU4Q8WWR8 484 aaPredicted RBP10.98□□□□□ -0.65
TCF4-248ENST00000616053 LAMTOR3Q9UHA4 124 aa10.98□□□□□ -0.65
TCF4-248ENST00000616053 HLA-DRB3P79483 266 aa10.98□□□□□ -0.65
TCF4-248ENST00000616053 SPTBN2O15020 2390 aa10.98□□□□□ -0.65
TCF4-248ENST00000616053 TMEM129A0AVI4 362 aa10.98□□□□□ -0.65
TCF4-248ENST00000616053 APOBEC3AP31941 199 aaPredicted RBP10.98□□□□□ -0.65
TCF4-248ENST00000616053 HBBP68871 147 aa10.98□□□□□ -0.65
TCF4-248ENST00000616053 GCSAMQ8N6F7 178 aa10.98□□□□□ -0.65
TCF4-248ENST00000616053 NRIP2Q9BQI9 281 aa10.98□□□□□ -0.65
TCF4-248ENST00000616053 IGKV6D-21A0A0A0MT36 114 aa10.97□□□□□ -0.65
TCF4-248ENST00000616053 BCL2L11O43521 198 aa10.97□□□□□ -0.65
TCF4-248ENST00000616053 CMC4P56277 68 aaPredicted RBP10.97□□□□□ -0.65
TCF4-248ENST00000616053 CDCA4Q9BXL8 241 aa10.97□□□□□ -0.65
TCF4-248ENST00000616053 PLA2G2FQ9BZM2 168 aa10.97□□□□□ -0.65
TCF4-248ENST00000616053 GP6Q9HCN6 339 aa10.97□□□□□ -0.65
TCF4-248ENST00000616053 NRN1Q9NPD7 142 aa10.97□□□□□ -0.65
TCF4-248ENST00000616053 LOC390937A0A1W2PQ73 354 aa10.97□□□□□ -0.65
TCF4-248ENST00000616053 KLF4O43474 513 aa10.97□□□□□ -0.65
TCF4-248ENST00000616053 UCP2P55851 309 aa10.97□□□□□ -0.65
TCF4-248ENST00000616053 BTG1P62324 171 aa10.97□□□□□ -0.65
TCF4-248ENST00000616053 Q5PR19 223 aa10.97□□□□□ -0.65
TCF4-248ENST00000616053 OR2H1Q9GZK4 316 aa10.97□□□□□ -0.65
TCF4-248ENST00000616053 C22orf46C9J442 243 aa10.97□□□□□ -0.65
TCF4-248ENST00000616053 ERGP11308 486 aa10.97□□□□□ -0.65
TCF4-248ENST00000616053 LINC00158P58513 81 aa10.97□□□□□ -0.65
TCF4-248ENST00000616053 RPRMQ9NS64 109 aa10.97□□□□□ -0.65
TCF4-248ENST00000616053 NPIPB4C9JG80 1138 aa10.97□□□□□ -0.65
TCF4-248ENST00000616053 RIPPLY3P57055 190 aa10.97□□□□□ -0.65
TCF4-248ENST00000616053 FOXB2Q5VYV0 432 aa10.97□□□□□ -0.65
TCF4-248ENST00000616053 CYB5R2Q6BCY4 276 aa10.97□□□□□ -0.65
TCF4-248ENST00000616053 OR10AG1Q8NH19 301 aa10.97□□□□□ -0.65
TCF4-248ENST00000616053 ZNF107Q9UII5 783 aaPredicted RBP10.97□□□□□ -0.65
TCF4-248ENST00000616053 POLR2AP24928 1970 aaKnown RBP10.97□□□□□ -0.65
TCF4-248ENST00000616053 MOSPD3O75425 235 aa10.97□□□□□ -0.65
TCF4-248ENST00000616053 DTX1Q86Y01 620 aa10.97□□□□□ -0.65
TCF4-248ENST00000616053 TPRX1Q8N7U7 411 aa10.97□□□□□ -0.65
TCF4-248ENST00000616053 ABHD1Q96SE0 405 aa10.97□□□□□ -0.65
TCF4-248ENST00000616053 NPAP1Q9NZP6 1156 aa10.97□□□□□ -0.65
TCF4-248ENST00000616053 SLIT3O75094 1523 aa10.96□□□□□ -0.65
TCF4-248ENST00000616053 AMY1AP04745 511 aa10.96□□□□□ -0.65
TCF4-248ENST00000616053 TMEM92Q6UXU6 159 aa10.96□□□□□ -0.65
TCF4-248ENST00000616053 A0A1B0GV72 72 aa10.96□□□□□ -0.65
TCF4-248ENST00000616053 GGTLC3B5MD39 225 aa10.96□□□□□ -0.65
TCF4-248ENST00000616053 CCL3P10147 92 aa10.96□□□□□ -0.65
TCF4-248ENST00000616053 DMRTA1Q5VZB9 504 aa10.96□□□□□ -0.65
TCF4-248ENST00000616053 OR1K1Q8NGR3 316 aa10.96□□□□□ -0.65
TCF4-248ENST00000616053 MGST3O14880 152 aa10.96□□□□□ -0.65
TCF4-248ENST00000616053 HPRT1P00492 218 aa10.96□□□□□ -0.65
TCF4-248ENST00000616053 LY6DQ14210 128 aa10.96□□□□□ -0.66
TCF4-248ENST00000616053 TMEM136Q6ZRR5 245 aa10.96□□□□□ -0.66
TCF4-248ENST00000616053 SIGLEC12Q96PQ1 595 aa10.96□□□□□ -0.66
TCF4-248ENST00000616053 RPP25Q9BUL9 199 aaKnown RBP10.96□□□□□ -0.66
TCF4-248ENST00000616053 SLC35B3Q9H1N7 401 aa10.96□□□□□ -0.66
TCF4-248ENST00000616053 ZNF703Q9H7S9 590 aaPredicted RBP10.96□□□□□ -0.66
TCF4-248ENST00000616053 TMEM160Q9NX00 188 aa10.96□□□□□ -0.66
TCF4-248ENST00000616053 LBHQ53QV2 105 aaPredicted RBP10.96□□□□□ -0.66
TCF4-248ENST00000616053 SRSF12Q8WXF0 261 aaKnown RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms