RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 LINC00311Q8N616 119 aa6.52□□□□□ -1.37
PCDH9-205ENST00000614931 ZNF645Q8N7E2 425 aa6.52□□□□□ -1.37
PCDH9-205ENST00000614931 OR2AK2Q8NG84 335 aa6.52□□□□□ -1.37
PCDH9-205ENST00000614931 OR52B4Q8NGK2 314 aa6.52□□□□□ -1.37
PCDH9-205ENST00000614931 OR4P4Q8NGL7 312 aa6.52□□□□□ -1.37
PCDH9-205ENST00000614931 C17orf50Q8WW18 174 aa6.52□□□□□ -1.37
PCDH9-205ENST00000614931 AJUBAQ96IF1 538 aa6.52□□□□□ -1.37
PCDH9-205ENST00000614931 SLC25A21Q9BQT8 299 aaPredicted RBP6.52□□□□□ -1.37
PCDH9-205ENST00000614931 CLEC7AQ9BXN2 247 aa6.52□□□□□ -1.37
PCDH9-205ENST00000614931 METTL8Q9H825 291 aaKnown RBP6.52□□□□□ -1.37
PCDH9-205ENST00000614931 SDHAF2Q9NX18 166 aa6.52□□□□□ -1.37
PCDH9-205ENST00000614931 PRR13Q9NZ81 148 aa6.52□□□□□ -1.37
PCDH9-205ENST00000614931 COPZ2Q9P299 210 aa6.52□□□□□ -1.37
PCDH9-205ENST00000614931 TET2Q6N021 2002 aaPredicted RBP6.52□□□□□ -1.37
PCDH9-205ENST00000614931 IGHV3OR16-10A0A075B7F0 116 aa6.51□□□□□ -1.37
PCDH9-205ENST00000614931 LINC00473A8K010 186 aa6.51□□□□□ -1.37
PCDH9-205ENST00000614931 VGLL3A8MV65 326 aa6.51□□□□□ -1.37
PCDH9-205ENST00000614931 LY6LH3BQJ8 138 aa6.51□□□□□ -1.37
PCDH9-205ENST00000614931 GPR31O00270 319 aa6.51□□□□□ -1.37
PCDH9-205ENST00000614931 TNFSF12O43508 249 aa6.51□□□□□ -1.37
PCDH9-205ENST00000614931 IGHV4-38-2P0DP08 117 aa6.51□□□□□ -1.37
PCDH9-205ENST00000614931 PAX6P26367 422 aa6.51□□□□□ -1.37
PCDH9-205ENST00000614931 SRP14P37108 136 aaKnown RBP6.51□□□□□ -1.37
PCDH9-205ENST00000614931 RND3P61587 244 aa6.51□□□□□ -1.37
PCDH9-205ENST00000614931 DHODHQ02127 395 aa6.51□□□□□ -1.37
PCDH9-205ENST00000614931 PPP1R1AQ13522 171 aa6.51□□□□□ -1.37
PCDH9-205ENST00000614931 KLF17Q5JT82 389 aaPredicted RBP6.51□□□□□ -1.37
PCDH9-205ENST00000614931 RUSC1-AS1Q66K80 236 aa6.51□□□□□ -1.37
PCDH9-205ENST00000614931 ZNF626Q68DY1 528 aa6.51□□□□□ -1.37
PCDH9-205ENST00000614931 LHFPL4Q7Z7J7 247 aa6.51□□□□□ -1.37
PCDH9-205ENST00000614931 SLC25A42Q86VD7 318 aa6.51□□□□□ -1.37
PCDH9-205ENST00000614931 LYG1Q8N1E2 194 aa6.51□□□□□ -1.37
PCDH9-205ENST00000614931 DYNAPQ8N1N2 210 aa6.51□□□□□ -1.37
PCDH9-205ENST00000614931 C8orf31Q8N9H6 132 aa6.51□□□□□ -1.37
PCDH9-205ENST00000614931 BVESQ8NE79 360 aa6.51□□□□□ -1.37
PCDH9-205ENST00000614931 OR11H6Q8NGC7 330 aa6.51□□□□□ -1.37
PCDH9-205ENST00000614931 OR9G1Q8NH87 305 aa6.51□□□□□ -1.37
PCDH9-205ENST00000614931 EDARADDQ8WWZ3 215 aa6.51□□□□□ -1.37
PCDH9-205ENST00000614931 LHX4Q969G2 390 aa6.51□□□□□ -1.37
PCDH9-205ENST00000614931 ST6GALNAC6Q969X2 333 aa6.51□□□□□ -1.37
PCDH9-205ENST00000614931 SLC2A9Q9NRM0 540 aa6.51□□□□□ -1.37
PCDH9-205ENST00000614931 C14orf166Q9Y224 244 aaKnown RBP6.51□□□□□ -1.37
PCDH9-205ENST00000614931 RBM7Q9Y580 266 aaKnown RBP6.51□□□□□ -1.37
PCDH9-205ENST00000614931 SOX21Q9Y651 276 aaPredicted RBP6.51□□□□□ -1.37
PCDH9-205ENST00000614931 ALG5Q9Y673 324 aa6.51□□□□□ -1.37
PCDH9-205ENST00000614931 MXRA5Q9NR99 2828 aa6.51□□□□□ -1.37
PCDH9-205ENST00000614931 ANK3Q12955 4377 aaKnown RBP6.5□□□□□ -1.37
PCDH9-205ENST00000614931 TRAV40A0A0B4J280 105 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 CENPVL3A0A0U1RRI6 287 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 CRYM-AS1A6NIL9 109 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 M0R1X1 148 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 PEX14O75381 377 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 PGLYRP1O75594 196 aaPredicted RBP6.5□□□□□ -1.37
PCDH9-205ENST00000614931 FSHBP01225 129 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 ARG1P05089 322 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 OR4E1P0C645 316 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 AKR1C4P17516 323 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 ECI1P42126 302 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 GPR12P47775 334 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 REG1BP48304 166 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 RAB7AP51149 207 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 ZNF137PP52743 207 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 RAG2P55895 527 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 PIGPP57054 158 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 BRWD1-AS2P59051 145 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 UBE2MP61081 183 aaKnown RBP6.5□□□□□ -1.37
PCDH9-205ENST00000614931 SRSF2Q01130 221 aaKnown RBP6.5□□□□□ -1.37
PCDH9-205ENST00000614931 MSMO1Q15800 293 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 TATDN3Q17R31 274 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 FBLN7Q53RD9 439 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 NCR3LG1Q68D85 454 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 GLDNQ6ZMI3 551 aaPredicted RBP6.5□□□□□ -1.37
PCDH9-205ENST00000614931 ZNF833PQ6ZTB9 187 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 TBC1D26Q86UD7 250 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 ZNF383Q8NA42 475 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 DRAXINQ8NBI3 349 aaPredicted RBP6.5□□□□□ -1.37
PCDH9-205ENST00000614931 BEND2Q8NDZ0 799 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 OR13D1Q8NGV5 346 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 OR51H1Q8NH63 302 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 LHFPL5Q8TAF8 219 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 ZFAND1Q8TCF1 268 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 FAM216AQ8WUB2 273 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 ZNF486Q96H40 463 aaPredicted RBP6.5□□□□□ -1.37
PCDH9-205ENST00000614931 TP53RKQ96S44 253 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 C19orf24Q9BVV8 132 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 MRPL20Q9BYC9 149 aaKnown RBP6.5□□□□□ -1.37
PCDH9-205ENST00000614931 ALX4Q9H161 411 aaPredicted RBP6.5□□□□□ -1.37
PCDH9-205ENST00000614931 C7orf69Q9H7B7 122 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 NAA60Q9H7X0 242 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 HEXA-AS1Q9H8Q6 139 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 GAB2Q9UQC2 676 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 AUP1Q9Y679 476 aa6.5□□□□□ -1.37
PCDH9-205ENST00000614931 hCG_2014768A0A024R1R8 64 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 A0A0A6YYJ9 748 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 hCG_1809904A0A1W2PP81 198 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 A0A1W2PPE2 198 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 A0A1W2PR64 198 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 A0A1W2PRV1 198 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 C9orf170A2RU37 121 aa6.49□□□□□ -1.37
PCDH9-205ENST00000614931 C7orf66A4D0T2 115 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms