RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 INO80CQ6PI98 192 aaPredicted RBP9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 OR5D13Q8NGL4 314 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 DTD1Q8TEA8 209 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 TMEM68Q96MH6 324 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 MRPL37Q9BZE1 423 aaKnown RBP9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 RPRMQ9NS64 109 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 CRIM1Q9NZV1 1036 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 PRR14LQ5THK1 2151 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 TMEM210A6NLX4 147 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 J3QT63 122 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 DFFBO76075 338 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 OR5I1Q13606 314 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 PCSK4Q6UW60 755 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 DHRS13Q6UX07 377 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 LINC00696Q6ZRV3 163 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 TBC1D26Q86UD7 250 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 OR4F5Q8NH21 305 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 RBMXL1Q96E39 390 aaKnown RBP9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 OR4F4Q96R69 305 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 HES4Q9HCC6 221 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 KCNS2Q9ULS6 477 aa9.19□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 A0A096LPE4 126 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 A0A1W2PPZ6 126 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 IQCF6A8MYZ5 107 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 TMEM50AO95807 157 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 TK1P04183 234 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 RAC2P15153 192 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 COX5AP20674 150 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 GPM6AP51674 278 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 Q6ZVH6 145 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 VASH2Q86V25 355 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 LFNGQ8NES3 379 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 OR10A7Q8NGE5 316 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 SNIP1Q8TAD8 396 aaKnown RBP9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 LHX4Q969G2 390 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 CCL28Q9NRJ3 127 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 PRSS50Q9UI38 385 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 PROB1E7EW31 1015 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 H0Y980 276 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 HS3ST1O14792 307 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 DEGS1O15121 323 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 NGFP01138 241 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 CEACAM1P13688 526 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 TLE4Q04727 773 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 HERPUD1Q15011 391 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 ZNF146Q15072 292 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 TBC1D28Q2M2D7 210 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 RNFT1Q5M7Z0 435 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 OR8G5Q8NG78 346 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 FAM216AQ8WUB2 273 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 RDH5Q92781 318 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 SPIN2AQ99865 258 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 SPIN2BQ9BPZ2 258 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 RBKSQ9H477 322 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 WIPI2Q9Y4P8 454 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 A8MWP6 167 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 NUTF2P61970 127 aaKnown RBP9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 MRPL49Q13405 166 aaKnown RBP9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 ZNF324BQ6AW86 544 aaPredicted RBP9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 TCF23Q7RTU1 214 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 H1FOOQ8IZA3 346 aaPredicted RBP9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 ST6GALNAC3Q8NDV1 305 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 OR13D1Q8NGV5 346 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 OR1P1Q8NH06 330 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 PLPPR2Q96GM1 343 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 ASCL3Q9NQ33 180 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 IL36RNQ9UBH0 155 aa9.18□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 USF3Q68DE3 2245 aa9.17□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 UBE2L5PA0A1B0GUS4 154 aa9.17□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 GALR1P47211 349 aa9.17□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 TDRG1Q3Y452 100 aa9.17□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 NMSQ5H8A3 153 aa9.17□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 SP5Q6BEB4 398 aaPredicted RBP9.17□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 Q6ZT83 130 aa9.17□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 SELENOHQ8IZQ5 122 aaKnown RBP9.17□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 TMEM256Q8N2U0 113 aa9.17□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 OBP2BQ9NPH6 170 aa9.17□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 PPP1R3CQ9UQK1 317 aa9.17□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 GOLT1BQ9Y3E0 138 aa9.17□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 TRAV24A0A0B4J272 114 aa9.17□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 ZNF320A2RRD8 509 aa9.17□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 SCTP09683 121 aa9.17□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 FAM78BQ5VT40 261 aa9.17□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 MDP1Q86V88 176 aa9.17□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 FAM58AQ8N1B3 248 aa9.17□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 TBX15Q96SF7 602 aa9.17□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 RTL8AQ9BWD3 113 aa9.17□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 SMDT1Q9H4I9 107 aa9.17□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 MBNL3Q9NUK0 354 aaKnown RBP9.17□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 SLC39A9Q9NUM3 307 aa9.17□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 KIAA1456Q9P272 454 aa9.17□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 IGKV1-6A0A0C4DH72 117 aa9.17□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 SMPD2O60906 423 aa9.17□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 ID3Q02535 119 aa9.17□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 C3orf36Q3SXR2 165 aa9.17□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 NDUFAF3Q9BU61 184 aa9.17□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 POLDIP2Q9Y2S7 368 aa9.17□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 PITX3O75364 302 aa9.16□□□□□ -0.94
SENP3-EIF4A1-201ENST00000614237 IGKV3-15P01624 115 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms